| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4953 |
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| Symbol | |
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| ID | 6113945 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 5471973 |
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| End bp | 5472803 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641624767 |
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| Product | formate dehydrogenase family accessory protein FdhD |
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| Protein accession | YP_001751798 |
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| Protein GI | 170724110 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1526] Uncharacterized protein required for formate dehydrogenase activity |
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| TIGRFAM ID | [TIGR00129] formate dehydrogenase family accessory protein FdhD |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.211752 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.000061887 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACAGCA AGCCTCCGGT CTGCGCGGCC TCGACGCCTC TGGCATTACC TGCCGCCAGC
AACACCTACG ATTACGTCCA GCTCGACGAC GCTGCGCGCG CCAGCACGCC GCTGGCCGAA
GAAGTCGCCC TGGCCATCGT CTACAACGGC CTCAACCAGG CCGTGATGCT GGTCAGCCCC
ACCGATCTTG AAGACTTTGC GGTCGGCTTC AGCGTTGGCA GCGGCATTGT CGAAGGTACC
GCGGACATCT ACGACCTGAA GCTCTCCGGC AGCGGCTCGG CGTTGTACGC CGACCTGGAG
ATTTCCAGCC GCGCATTCTG GAACCTGAAA AACCAGCGCC GCCAACTGGC CGGCACCAGC
GGTTGCGGCC TGTGTGGCGT CGAAGCCCTG GAGCAGGCGC TGCCGGAGCT GGCCGAGCTG
CCTGGCGCGC CATTGCCACC GGCGCAGTGG CTGGTGGGCC TGCGTGAGCG TATCGATGCC
TTCCAGCCTC TGGGCCAGCA CTGTGGTGCC GTGCATGCGG CATTGTTCAT GAACGCCCAG
GGCGAACTGC TGCTCGGCCG CGAAGACATC GGCCGCCACA ACGCCCTGGA TAAGCTGATC
GGCGCCCTGC TGCGCCAGGG CATCGCCACC GAAGGCGGCC TGGCGATCGT CACCAGCCGC
TGCAGCCTGG AGCTGATCCA GAAAGTCCTG CGTGCCGGCA TCCAGACCTT GGTCAGCCTC
TCGGCCCCTA CCGGGCTTGC CCTGCAATGG GCGCGCAAGC ACAACCTCAA CCTCATTCAT
CTGCCCAAAC ACAGTGCACC GCGGGTCTAT AGCCCAGCGG CGGAGTCGTA A
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| Protein sequence | MNSKPPVCAA STPLALPAAS NTYDYVQLDD AARASTPLAE EVALAIVYNG LNQAVMLVSP
TDLEDFAVGF SVGSGIVEGT ADIYDLKLSG SGSALYADLE ISSRAFWNLK NQRRQLAGTS
GCGLCGVEAL EQALPELAEL PGAPLPPAQW LVGLRERIDA FQPLGQHCGA VHAALFMNAQ
GELLLGREDI GRHNALDKLI GALLRQGIAT EGGLAIVTSR CSLELIQKVL RAGIQTLVSL
SAPTGLALQW ARKHNLNLIH LPKHSAPRVY SPAAES
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