28 homologs were found in PanDaTox collection
for query gene DvMF_2438 on replicon NC_011769
Organism: Desulfovibrio vulgaris str. 'Miyazaki F'



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011769  DvMF_2438  type III secretion system apparatus protein YscQ/HrcQ  100 
 
 		 409 aa  780    Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  1 
 
 
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NC_008741  Dvul_2985  type III secretion system apparatus protein YscQ/HrcQ  43.39 
 
 		 475 aa  232  1e-59  Desulfovibrio vulgaris DP4  Bacteria  normal  1  n/a   
 
 
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NC_010086  Bmul_3755  type III secretion system apparatus protein YscQ/HrcQ  28.26 
 
 		 443 aa  77  0.0000000000006  Burkholderia multivorans ATCC 17616  Bacteria  normal  1  decreased coverage  0.00143257 
 
 
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NC_010515  Bcenmc03_5445  type III secretion system apparatus protein YscQ/HrcQ  29.72 
 
 		 384 aa  66.2  0.0000000009  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.322534  normal  0.0784231 
 
 
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NC_008061  Bcen_3527  Type III secretion system apparatus protein YscQ/HrcQ  29.72 
 
 		 384 aa  66.2  0.0000000009  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.20838  n/a   
 
 
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NC_008543  Bcen2424_4839  type III secretion system apparatus protein YscQ/HrcQ  29.72 
 
 		 384 aa  66.2  0.0000000009  Burkholderia cenocepacia HI2424  Bacteria  hitchhiker  0.0073947  decreased coverage  0.0012825 
 
 
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NC_010552  BamMC406_4736  type III secretion system apparatus protein YscQ/HrcQ  28.91 
 
 		 381 aa  62.4  0.00000001  Burkholderia ambifaria MC40-6  Bacteria  normal  0.458134  normal  0.482732 
 
 
-
 
NC_008391  Bamb_4214  type III secretion system apparatus protein YscQ/HrcQ  28.91 
 
 		 381 aa  62  0.00000002  Burkholderia ambifaria AMMD  Bacteria  normal  1  normal  0.964929 
 
 
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NC_012912  Dd1591_1886  type III secretion system apparatus protein YscQ/HrcQ  27.39 
 
 		 387 aa  57  0.0000006  Dickeya zeae Ech1591  Bacteria  normal  1  n/a   
 
 
-
 
NC_009783  VIBHAR_01727  type III secretion system protein  22.22 
 
 		 322 aa  53.5  0.000007  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
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NC_007760  Adeh_0705  surface presentation of antigens (SPOA) protein  38.71 
 
 		 324 aa  50.1  0.00008  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.148267  n/a   
 
 
-
 
NC_013456  VEA_003363  type III secretion inner membrane protein YscQ  23.19 
 
 		 322 aa  49.3  0.0001  Vibrio sp. Ex25  Bacteria  normal  1  n/a   
 
 
-
 
NC_011145  AnaeK_0740  type III secretion system apparatus protein YscQ/HrcQ  43.94 
 
 		 324 aa  48.5  0.0002  Anaeromyxobacter sp. K  Bacteria  normal  0.0456239  n/a   
 
 
-
 
NC_011891  A2cp1_0741  type III secretion system apparatus protein YscQ/HrcQ  42.42 
 
 		 324 aa  48.5  0.0002  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.1614  n/a   
 
 
-
 
NC_010157  YpAngola_B0044  type III secretion system protein  38.36 
 
 		 307 aa  48.9  0.0002  Yersinia pestis Angola  Bacteria  hitchhiker  0.000000000000156559  normal  1 
 
 
-
 
NC_009075  BURPS668_A2279  type III secretion system apparatus protein YscQ/HrcQ  39.19 
 
 		 424 aa  47.4  0.0004  Burkholderia pseudomallei 668  Bacteria  normal  1  n/a   
 
 
-
 
NC_009079  BMA10247_A0636  type III secretion inner membrane protein SctQ  39.19 
 
 		 645 aa  47.4  0.0005  Burkholderia mallei NCTC 10247  Bacteria  normal  1  n/a   
 
 
-
 
NC_008835  BMA10229_1956  type III secretion inner membrane protein SctQ  39.19 
 
 		 645 aa  47.4  0.0005  Burkholderia mallei NCTC 10229  Bacteria  normal  1  n/a   
 
 
-
 
NC_006349  BMAA1629  type III secretion inner membrane protein SctQ  39.19 
 
 		 645 aa  47.4  0.0005  Burkholderia mallei ATCC 23344  Bacteria  normal  1  n/a   
 
 
-
 
NC_009078  BURPS1106A_A2080  type III secretion system apparatus protein YscQ/HrcQ  36.9 
 
 		 323 aa  47  0.0006  Burkholderia pseudomallei 1106a  Bacteria  normal  0.355086  n/a   
 
 
-
 
NC_007435  BURPS1710b_A0578  type III secretion system apparatus protein YscQ/HrcQ  36.9 
 
 		 319 aa  47  0.0006  Burkholderia pseudomallei 1710b  Bacteria  normal  0.194369  n/a   
 
 
-
 
NC_009075  BURPS668_A2168  type III secretion system apparatus protein YscQ/HrcQ  36.9 
 
 		 323 aa  47  0.0007  Burkholderia pseudomallei 668  Bacteria  normal  0.712652  n/a   
 
 
-
 
NC_009675  Anae109_0747  type III secretion system apparatus protein YscQ/HrcQ  43.55 
 
 		 334 aa  45.1  0.002  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.12595  normal  1 
 
 
-
 
NC_009079  BMA10247_A0747  type III secretion system protein BsaV  36.9 
 
 		 335 aa  44.7  0.003  Burkholderia mallei NCTC 10247  Bacteria  normal  1  n/a   
 
 
-
 
NC_006349  BMAA1537  type III secretion system protein BsaV  36.9 
 
 		 327 aa  44.7  0.003  Burkholderia mallei ATCC 23344  Bacteria  normal  0.402706  n/a   
 
 
-
 
NC_008835  BMA10229_2067  type III secretion system protein BsaV  36.9 
 
 		 335 aa  44.7  0.003  Burkholderia mallei NCTC 10229  Bacteria  normal  0.0878838  n/a   
 
 
-
 
NC_007650  BTH_II0835  type III secretion system protein BsaV  36 
 
 		 320 aa  44.7  0.003  Burkholderia thailandensis E264  Bacteria  normal  0.0264948  n/a   
 
 
-
 
NC_010717  PXO_03405  type III secretion apparatus protein, YscQ/HrcQ family  32.93 
 
 		 273 aa  43.5  0.007  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  1  n/a   
 
 
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