| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_2438 |
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| Symbol | |
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| ID | 7174372 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | + |
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| Start bp | 3072806 |
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| End bp | 3074035 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 643540968 |
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| Product | type III secretion system apparatus protein YscQ/HrcQ |
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| Protein accession | YP_002436847 |
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| Protein GI | 218887526 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1886] Flagellar motor switch/type III secretory pathway protein |
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| TIGRFAM ID | [TIGR02551] type III secretion system apparatus protein YscQ/HrcQ |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 87 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCTGAAC ACCTGCACCA ATCCGAGGCC GCCGCGCCAC AACCCTTTGC GGCCCACCCG
CTGGCGCCGG GCGCGGCGCG GCTGCTCAAC GTGCTGTGCA CCCGCAGCCA GCCGTGGCCG
GTCACCGTGG GGCTGGCCGC CTGCCGCCTT TCCGTGCCGG TGCTGCCGCC GGAAGCCCCC
GCGCCGGAGT ACGGCCTGCG GGTACGCTGC GGCGCCCATG TCTGGAGGCT GGACGTGGGG
CCGGGGCTGC CGCTGGGGCT GCACCCGGCA CTGGCGCAGG CCGATGCCGA CGCCGCCCTG
CCAGAAGAAG TGCAGCTGGC GGTGGTGGAA TTGCTGGCCG CGCCGCTGGC GGAGGCGCTG
GGGCGCTTTC TCGGCACGTC GGTGACGTGT GAAGCCCTTG CCGGCGGCCT TGACGGCGAG
GCAGCGCAAC CTGCCGGGGA TCTGCCCTGC CGGGTGGGCC TGCTGCTGGA GGTGCCCGGC
GATGACGGCG GGCACACGCC CGTGCCCCTG ACCCTGCATC TTTCCGACGC CGCGTCGGCC
ATGCTGGCCG AACAGTGCCT GCGCCTGCCG CAGCGGCACG AGGCGCGCGG TCACCTGCCG
GTTGACGTCG TGGTGGAGGC CGGGCGCATG TGTCTTGCCG CCGCAGAACT GGCCGACCTT
GCCCCCGGCG ACATCCTGCT GCCCGACGAC TATCCGGCCC ACCGGGGCCG CCTGACCCTT
GCCGTTACGG ACCCCGCAGG TCCGGCCCAG GCCCCGAGCC CGGCCCCGAC CCTGACCGTG
CCGTGCGCCG TGGCCGATGG CCGGGCCACC GTGCTGGACA TCGTGCGCAA CGACGCAACC
CCCATGGAGA CCACCATGTC TGATACCACG CCCACCCCAC AGCCCGACGG CACCCCGGCG
GCGGATGCCG CGCCCGCGGC GGAAGGTTCC GCAGCGGCAG CCGGAGCGCC AGCAGCGGAA
GGGACCTCTG CGGCAGCCGC ATCGTCCATC GACGTGAACG CCCTTGGCGT GACCGTGGTG
TTCGAACTGG AGCGCCGTCC CATGACCGTG GGCGACCTTG CCGCGCTGGC CCCCGGCTAC
ACCTTTGCCC TGGGGGCCGA CCCGCTGGGC CCGGTCACCC TGACCGTGGG TGGCAGGGCC
GTGGGCACGG GCCGCCTGGT GGACCTTGGC GGCACGCTGG GCGTGCAGGT GCTGCGCATG
GGCCAGGCTG GGGAGGGTGA CAGGCCGTGA
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| Protein sequence | MAEHLHQSEA AAPQPFAAHP LAPGAARLLN VLCTRSQPWP VTVGLAACRL SVPVLPPEAP
APEYGLRVRC GAHVWRLDVG PGLPLGLHPA LAQADADAAL PEEVQLAVVE LLAAPLAEAL
GRFLGTSVTC EALAGGLDGE AAQPAGDLPC RVGLLLEVPG DDGGHTPVPL TLHLSDAASA
MLAEQCLRLP QRHEARGHLP VDVVVEAGRM CLAAAELADL APGDILLPDD YPAHRGRLTL
AVTDPAGPAQ APSPAPTLTV PCAVADGRAT VLDIVRNDAT PMETTMSDTT PTPQPDGTPA
ADAAPAAEGS AAAAGAPAAE GTSAAAASSI DVNALGVTVV FELERRPMTV GDLAALAPGY
TFALGADPLG PVTLTVGGRA VGTGRLVDLG GTLGVQVLRM GQAGEGDRP
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