| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Anae109_0747 |
|---|
| Symbol | |
|---|
| ID | 5377280 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter sp. Fw109-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009675 |
|---|
| Strand | - |
|---|
| Start bp | 849508 |
|---|
| End bp | 850512 |
|---|
| Gene Length | 1005 bp |
|---|
| Protein Length | 334 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 79% |
|---|
| IMG OID | 640842257 |
|---|
| Product | type III secretion system apparatus protein YscQ/HrcQ |
|---|
| Protein accession | YP_001377944 |
|---|
| Protein GI | 153003619 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG1868] Flagellar motor switch protein |
|---|
| TIGRFAM ID | [TIGR02551] type III secretion system apparatus protein YscQ/HrcQ |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.12595 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 52 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCGTG GACTGTCCGG AGCCATGCCG CTTCCCTTCG AGCTCCCCCT CGTGTCCCGT
GGCCACGCCG AGCTGACCCG CGCCGCCCGC GCGCTCGGGG CGGAGGTCGC CTCCGCCGCC
GCCGGGTCGC TCGCCTCGGT CGTCGGGGCG GACGTCGCCA TCGTCGCCCG GCCTGTCGCG
GGCCGCGTGC TCCCCCGCGC CGGCGTCGCG CGCCTCTCCG TGGACCTGCC CGCGCTGCCA
GGCACCGCGA GCGTCGAGGT GGAGCCCGCG CTCGTCGTCG CGCTGGTCGA CCGGCTGGCC
GGCGGGAAGG GCGAGGCGCT CGGCGCGACC TCCCTCACGA GCGTGGAGTC CGCGGCGCTC
GAGCTCTTCG CCCTGGCGGC GCTCGACGGT GCCTGCCAGC TCGCGGCGGT CGAGGAGACG
CTCTCGCCGC GCCTCTGCCG CGCCACGCCC GAGCCTTCCG CGGCGCTCGC GGTCGAGCTC
ACCCTCACCG CCGGTGAGCT GTCGGGGCGG GCGCGGCTCC TCCTGCCCGC GGCGGCGGTG
CGGGCGCTGC GCGGCGCGCC GGCCTTCGAC GGCGACGCGG CGGGGATCGG GCTCGTCGCG
TCGGTCCGGG GCGGCGCCGC GGCCCTCCGG ACCGAGGAGC TCGAGGCGCT CGCGGCCGGC
GACGTGGTGG TGCTCGACGG CGGCGCCGGG CCGCGTGCGC TCGTGCTCCC AGGGGGCGCG
CGCCTGTCGG GCCGGCACGA GGACGGAACC TTTCACGTGG AGGAGATCGA GATGACCCAG
CGGATGGCGC AGCTTCCGGT CGTGCTCGAG GTCGAGCTCG CCCGGGTGGA GGTGACCCTC
GCCGAGCTCG CCCGGCTGGA GCCGGGCGGG ATCCTGCCCC TCGCCCTGGA CCGCCGCGGG
CTGGTCACGC TGCGCGCGGG CGAGCGCGCG GTGGCGCGCG GGGAGCTCGT GGACGTGGAC
GGCGCGGTCG GCGTCCGCAT CATCGACCTC GAGGTGACGC CGTGA
|
|---|
| Protein sequence | MRRGLSGAMP LPFELPLVSR GHAELTRAAR ALGAEVASAA AGSLASVVGA DVAIVARPVA
GRVLPRAGVA RLSVDLPALP GTASVEVEPA LVVALVDRLA GGKGEALGAT SLTSVESAAL
ELFALAALDG ACQLAAVEET LSPRLCRATP EPSAALAVEL TLTAGELSGR ARLLLPAAAV
RALRGAPAFD GDAAGIGLVA SVRGGAAALR TEELEALAAG DVVVLDGGAG PRALVLPGGA
RLSGRHEDGT FHVEEIEMTQ RMAQLPVVLE VELARVEVTL AELARLEPGG ILPLALDRRG
LVTLRAGERA VARGELVDVD GAVGVRIIDL EVTP
|
|---|
| |