Gene BMAA1537 details

Gene Information

• Locus tag: BMAA1537
• Symbol: bsaV
• ID: 3086542
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia mallei ATCC 23344
• Kingdom: Bacteria
• Replicon accession: NC_006349
• Strand: -
• Start bp: 1665459
• End bp: 1666442
• Gene Length: 984 bp
• Protein Length: 327 aa
• Translation table: 11
• GC content: 74%
• IMG OID: 637565421
• Product: type III secretion system protein BsaV
• Protein accession: YP_106127
• Protein GI: 53716455
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG1886] Flagellar motor switch/type III secretory pathway protein
• TIGRFAM ID: [TIGR02551] type III secretion system apparatus protein YscQ/HrcQ

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.402706
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCGCGC GCTATACGTT GTTCAGGCGC GTCGCGCCCG CGGAATTGCC GCTGTACCGC 
CGTGCGCGGG CGCTGCGCGC GGCGGGCGAG CACGCCGCGC TGCGCACGAT CGCGCCGCCG 
CGCGGCTATG CGGCGCTGCG CGCGACGTGG CGGGGCGTCG AGCACGACGG TTGGGTCGAC 
CTCGACGATC TGATGCGCCG CCGCTACCCG GCGCTCGGCG CGCTCGCGTG GCGCGCGCTC 
GACAGGCGCT ACGCGCTCGA TTTGCTGAGC GGGCGGGACG CGGCGGCCGA GCTGCCCGCG 
CCGCCCGGCG GCTGGGCGCA TGTGCGGCTC GTCGATCTCG TCGAGCGCGC GCTGCCCGCC 
GAGCCGCTGC TGTGTTTCGA CACCCCGGGC CGCGCGCGTG CGCTGTTCCG CGCGTTCCCG 
GACGAAGCGC CCGCGGCGCG CACCGTGGCC GACATCGGCG GCGTGCCGCT CACGATGCGC 
TTCGCGATCG GCACCGCGCG CCTGCCGCTC GCGCTGTTGC CCGCCGTCGC GCCGGGCGAC 
GTGCTGCTCG TATGCGCGCC GCGCAACGTG GTCCGCATCG GGGCGCGCGC ACTGTGTGAA 
TTTTGCTGCG AAGGAGAAAA CATCATGCTG AACGAACCCC TGGCCGACTC CGCGATCGAC 
GCCCTGCACG ACGCATCGCA CGACGCATCG CACGACACAT CGCACGACGA ACCGACGGCG 
GCGCACGCGC CGCCGGCTTT CGACATCGAT GCGCTGCCCG TCACGCTGGA GTTCGTGCTG 
CACGACGAAC GCGTGACGGT CGAGCAGCTC GCGGGCTGCC ACCTGGGCAT GGTGCTGCCG 
CTGCGCGGTG CGCCGGGCGA GGTGACGATC CGCGCGAACG GCCGGCCGTT CGGCCGCGGC 
GAGCTGATCC AGGTCGGCGA GCAGCTCGCG GTCGAGGTGA AGGCGCTCTG GCGCGCGAAG 
CCGGCGGCGT GCGATGGCGA ATAA 

 

Protein sequence

MSARYTLFRR VAPAELPLYR RARALRAAGE HAALRTIAPP RGYAALRATW RGVEHDGWVD 
LDDLMRRRYP ALGALAWRAL DRRYALDLLS GRDAAAELPA PPGGWAHVRL VDLVERALPA 
EPLLCFDTPG RARALFRAFP DEAPAARTVA DIGGVPLTMR FAIGTARLPL ALLPAVAPGD 
VLLVCAPRNV VRIGARALCE FCCEGENIML NEPLADSAID ALHDASHDAS HDTSHDEPTA 
AHAPPAFDID ALPVTLEFVL HDERVTVEQL AGCHLGMVLP LRGAPGEVTI RANGRPFGRG 
ELIQVGEQLA VEVKALWRAK PAACDGE