More than 300 homologs were found in PanDaTox collection
for query gene Bfae_03360 on replicon NC_013172
Organism: Brachybacterium faecium DSM 4810



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013172  Bfae_03360  ABC-type nitrate/sulfonate/bicarbonate transport system, permease component  100 
 
 
278 aa  540  1e-153  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013124  Afer_0666  binding-protein-dependent transport systems inner membrane component  49.19 
 
 
271 aa  189  2.9999999999999997e-47  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  n/a   
 
 
-
 
NC_007348  Reut_B5801  binding-protein dependent transport system inner membrane protein  39.47 
 
 
290 aa  188  1e-46  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_0846  binding-protein-dependent transport systems inner membrane component  39.68 
 
 
255 aa  179  4.999999999999999e-44  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.185051 
 
 
-
 
NC_009656  PSPA7_1679  ABC transporter permease  35.47 
 
 
274 aa  136  3.0000000000000003e-31  Pseudomonas aeruginosa PA7  Bacteria  normal  0.451747  n/a   
 
 
-
 
NC_009485  BBta_2566  ABC transporter, membrane subunit  32.28 
 
 
252 aa  136  5e-31  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.345232 
 
 
-
 
NC_009504  BOV_A0406  putative taurine ABC transporter, permease protein  32.92 
 
 
272 aa  135  6.0000000000000005e-31  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_004311  BRA0467  taurine ABC transporter, permease protein, putative  32.92 
 
 
272 aa  135  6.0000000000000005e-31  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_19510  ABC transporter permease  35.47 
 
 
274 aa  135  6.0000000000000005e-31  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_1422  binding-protein-dependent transport systems inner membrane component  31.97 
 
 
273 aa  135  8e-31  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_1261  binding-protein-dependent transport systems inner membrane component  31.97 
 
 
273 aa  135  8e-31  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.306936 
 
 
-
 
NC_011658  BCAH187_A3058  taurine ABC transporter, permease protein  28.9 
 
 
274 aa  135  9e-31  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_009668  Oant_3592  binding-protein-dependent transport systems inner membrane component  34.06 
 
 
273 aa  135  9.999999999999999e-31  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_2515  binding-protein dependent transport system inner membrane protein  33.33 
 
 
282 aa  130  2.0000000000000002e-29  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.313862  normal 
 
 
-
 
NC_007492  Pfl01_3295  binding-protein dependent transport system inner membrane protein  34.4 
 
 
279 aa  129  4.0000000000000003e-29  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_3478  binding-protein-dependent transport systems inner membrane component  31.22 
 
 
291 aa  129  5.0000000000000004e-29  Gordonia bronchialis DSM 43247  Bacteria  normal  0.466071  n/a   
 
 
-
 
NC_013517  Sterm_0483  binding-protein-dependent transport systems inner membrane component  29.22 
 
 
275 aa  128  9.000000000000001e-29  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_1211  binding-protein-dependent transport systems inner membrane component  30.86 
 
 
273 aa  127  2.0000000000000002e-28  Methylobacterium populi BJ001  Bacteria  normal  0.132759  normal  0.452833 
 
 
-
 
NC_002947  PP_0239  binding-protein-dependent transport systems inner membrane component  30.86 
 
 
265 aa  127  3e-28  Pseudomonas putida KT2440  Bacteria  normal  hitchhiker  0.00756787 
 
 
-
 
NC_007953  Bxe_C0735  nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein  30.77 
 
 
273 aa  127  3e-28  Burkholderia xenovorans LB400  Bacteria  normal  0.714635  normal 
 
 
-
 
NC_010501  PputW619_4973  binding-protein-dependent transport systems inner membrane component  31.28 
 
 
265 aa  127  3e-28  Pseudomonas putida W619  Bacteria  normal  0.0722896  normal  0.022026 
 
 
-
 
NC_009485  BBta_7502  ABC transporter permease  32.05 
 
 
256 aa  126  4.0000000000000003e-28  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.50681 
 
 
-
 
NC_009512  Pput_0254  binding-protein-dependent transport systems inner membrane component  30.86 
 
 
265 aa  126  4.0000000000000003e-28  Pseudomonas putida F1  Bacteria  normal  0.293544  normal  0.0445843 
 
 
-
 
NC_011887  Mnod_7932  binding-protein-dependent transport systems inner membrane component  30.68 
 
 
283 aa  126  4.0000000000000003e-28  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_2787  ABC transporter, permease protein  33.46 
 
 
282 aa  125  5e-28  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.0328614  n/a   
 
 
-
 
NC_006274  BCZK2748  sulfonate/taurine ABC transporter permease  29.49 
 
 
274 aa  126  5e-28  Bacillus cereus E33L  Bacteria  normal  0.947189  n/a   
 
 
-
 
NC_013421  Pecwa_0030  binding-protein-dependent transport systems inner membrane component  31.22 
 
 
264 aa  125  7e-28  Pectobacterium wasabiae WPP163  Bacteria  normal  0.050552  n/a   
 
 
-
 
NC_009485  BBta_6360  putative sulfonate ABC transporter, permease protein  31.52 
 
 
267 aa  125  8.000000000000001e-28  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.821284  normal 
 
 
-
 
NC_009832  Spro_1736  binding-protein-dependent transport systems inner membrane component  31.38 
 
 
264 aa  125  9e-28  Serratia proteamaculans 568  Bacteria  normal  0.440066  normal  0.144233 
 
 
-
 
NC_003909  BCE_3060  taurine ABC transporter, permease protein  29.46 
 
 
274 aa  125  1e-27  Bacillus cereus ATCC 10987  Bacteria  normal  0.0244271  n/a   
 
 
-
 
NC_011832  Mpal_1145  binding-protein-dependent transport systems inner membrane component  31.8 
 
 
279 aa  124  1e-27  Methanosphaerula palustris E1-9c  Archaea  normal  0.208956  normal 
 
 
-
 
NC_009439  Pmen_4330  binding-protein-dependent transport systems inner membrane component  34.22 
 
 
276 aa  125  1e-27  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.936191 
 
 
-
 
NC_009720  Xaut_4051  binding-protein-dependent transport systems inner membrane component  30.83 
 
 
273 aa  124  1e-27  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.395379 
 
 
-
 
NC_010322  PputGB1_0263  binding-protein-dependent transport systems inner membrane component  30.86 
 
 
265 aa  125  1e-27  Pseudomonas putida GB-1  Bacteria  normal  0.791848  normal 
 
 
-
 
NC_013510  Tcur_0464  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
273 aa  125  1e-27  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_014211  Ndas_4937  binding-protein-dependent transport systems inner membrane component  31.62 
 
 
287 aa  124  2e-27  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0773955  normal 
 
 
-
 
NC_007298  Daro_2152  binding-protein dependent transport system inner membrane protein  31.7 
 
 
271 aa  124  2e-27  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.529987 
 
 
-
 
NC_011981  Avi_7197  ABC transporter membrane spanning protein (aliphatic sulphonate)  32.62 
 
 
272 aa  124  2e-27  Agrobacterium vitis S4  Bacteria  normal  0.0116141  n/a   
 
 
-
 
NC_009253  Dred_1575  binding-protein-dependent transport systems inner membrane component  29.58 
 
 
254 aa  124  2e-27  Desulfotomaculum reducens MI-1  Bacteria  normal  0.0747147  n/a   
 
 
-
 
NC_012917  PC1_0024  binding-protein-dependent transport systems inner membrane component  30.8 
 
 
264 aa  123  3e-27  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_5412  binding-protein dependent transport system inner membrane protein  30.96 
 
 
260 aa  123  3e-27  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.210037  hitchhiker  0.00191971 
 
 
-
 
NC_009483  Gura_3884  binding-protein-dependent transport systems inner membrane component  29.32 
 
 
258 aa  123  3e-27  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_1899  binding-protein-dependent transport systems inner membrane component  33.18 
 
 
275 aa  123  3e-27  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_009050  Rsph17029_3612  binding-protein-dependent transport systems inner membrane component  33.46 
 
 
276 aa  123  3e-27  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_007953  Bxe_C0981  nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein  31.82 
 
 
279 aa  123  4e-27  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_8275  ABC-type transporter, permease protein  32.37 
 
 
272 aa  122  5e-27  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.144641 
 
 
-
 
NC_007952  Bxe_B2638  ABC sulfonate transporter, inner membrane subunit  31.82 
 
 
279 aa  122  7e-27  Burkholderia xenovorans LB400  Bacteria  normal  0.0950643  hitchhiker  0.0000361652 
 
 
-
 
NC_008463  PA14_19570  ABC transporter permease  30.54 
 
 
262 aa  122  8e-27  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_1692  putative ABC transporter membrane protein  32.64 
 
 
281 aa  121  9.999999999999999e-27  Thermobifida fusca YX  Bacteria  hitchhiker  0.00465779  n/a   
 
 
-
 
NC_010511  M446_5130  binding-protein-dependent transport systems inner membrane component  31.95 
 
 
272 aa  121  9.999999999999999e-27  Methylobacterium sp. 4-46  Bacteria  normal  0.612608  normal  0.0470724 
 
 
-
 
NC_009675  Anae109_3869  binding-protein-dependent transport systems inner membrane component  29.85 
 
 
274 aa  121  9.999999999999999e-27  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_006348  BMA1238  aliphatic sulfonate ABC transporter, permease protein  31.78 
 
 
273 aa  120  1.9999999999999998e-26  Burkholderia mallei ATCC 23344  Bacteria  normal  0.466833  n/a   
 
 
-
 
NC_007434  BURPS1710b_1990  aliphatic sulfonates ABC transporter, permease protein  31.78 
 
 
273 aa  120  1.9999999999999998e-26  Burkholderia pseudomallei 1710b  Bacteria  normal  0.088895  n/a   
 
 
-
 
NC_007492  Pfl01_0254  binding-protein dependent transport system inner membrane protein  31.12 
 
 
279 aa  120  1.9999999999999998e-26  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.57663 
 
 
-
 
NC_010508  Bcenmc03_1539  binding-protein-dependent transport systems inner membrane component  31.22 
 
 
270 aa  120  1.9999999999999998e-26  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.0890555  normal 
 
 
-
 
NC_007974  Rmet_4332  ABC transporter permease  30.08 
 
 
298 aa  120  1.9999999999999998e-26  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_008060  Bcen_1083  binding-protein-dependent transport systems inner membrane component  31.22 
 
 
270 aa  120  1.9999999999999998e-26  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_1563  binding-protein-dependent transport systems inner membrane component  31.22 
 
 
270 aa  120  1.9999999999999998e-26  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_4306  binding-protein-dependent transport systems inner membrane component  33.05 
 
 
278 aa  120  1.9999999999999998e-26  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0649738  hitchhiker  0.00238236 
 
 
-
 
NC_008785  BMASAVP1_A1724  aliphatic sulfonate ABC transporter, permease protein  31.78 
 
 
273 aa  120  1.9999999999999998e-26  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A0381  aliphatic sulfonate ABC transporter, permease protein  31.78 
 
 
273 aa  120  1.9999999999999998e-26  Burkholderia mallei NCTC 10229  Bacteria  normal  0.410212  n/a   
 
 
-
 
NC_010725  Mpop_0411  binding-protein-dependent transport systems inner membrane component  31.3 
 
 
279 aa  120  1.9999999999999998e-26  Methylobacterium populi BJ001  Bacteria  normal  0.760866  normal 
 
 
-
 
NC_009080  BMA10247_0780  aliphatic sulfonate ABC transporter, permease protein  31.78 
 
 
273 aa  120  1.9999999999999998e-26  Burkholderia mallei NCTC 10247  Bacteria  normal  0.175921  n/a   
 
 
-
 
NC_009656  PSPA7_1684  ABC transporter permease  30.86 
 
 
262 aa  120  3e-26  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_4641  binding-protein-dependent transport systems inner membrane component  31.74 
 
 
277 aa  120  3e-26  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.750363  n/a   
 
 
-
 
NC_010465  YPK_0423  binding-protein-dependent transport systems inner membrane component  31.22 
 
 
264 aa  120  3e-26  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_1673  binding-protein-dependent transport systems inner membrane component  31.33 
 
 
263 aa  120  3e-26  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_0355  putative ABC aliphatic sulfonates transporter, permease subunit  31.22 
 
 
264 aa  120  3e-26  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_1837  aliphatic sulfonates ABC transporter, permease protein  31.78 
 
 
269 aa  120  3e-26  Burkholderia pseudomallei 1106a  Bacteria  normal  0.669476  n/a   
 
 
-
 
NC_009485  BBta_3299  putative sulfonate ABC transporter, permease protein  31.69 
 
 
286 aa  119  3.9999999999999996e-26  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.201269  normal  0.262094 
 
 
-
 
NC_008043  TM1040_3034  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
269 aa  119  3.9999999999999996e-26  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_008390  Bamb_1464  binding-protein-dependent transport systems inner membrane component  31.22 
 
 
270 aa  119  4.9999999999999996e-26  Burkholderia ambifaria AMMD  Bacteria  normal  0.0183453  n/a   
 
 
-
 
NC_009074  BURPS668_1822  aliphatic sulfonates ABC transporter, permease protein  32.2 
 
 
269 aa  119  4.9999999999999996e-26  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_007510  Bcep18194_A4705  nitrate/sulfonate/bicarbonate ABC transporter periplasmic ligand-binding protein  31.22 
 
 
270 aa  119  6e-26  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_007947  Mfla_1557  binding-protein-dependent transport systems inner membrane component  30.13 
 
 
272 aa  119  6e-26  Methylobacillus flagellatus KT  Bacteria  decreased coverage  0.00127239  hitchhiker  0.00240392 
 
 
-
 
NC_002947  PP_0208  nitrate ABC transporter, permease protein, putative  33.48 
 
 
260 aa  119  7e-26  Pseudomonas putida KT2440  Bacteria  normal  normal  0.473726 
 
 
-
 
NC_010622  Bphy_1648  binding-protein-dependent transport systems inner membrane component  29.54 
 
 
283 aa  119  7e-26  Burkholderia phymatum STM815  Bacteria  normal  0.189471  normal  0.0804385 
 
 
-
 
NC_012880  Dd703_1642  binding-protein-dependent transport systems inner membrane component  31.3 
 
 
263 aa  119  7.999999999999999e-26  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_2479  binding-protein-dependent transport systems inner membrane component  33.47 
 
 
258 aa  118  9.999999999999999e-26  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_1369  ABC transporter membrane protein  31.03 
 
 
272 aa  118  9.999999999999999e-26  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0458182 
 
 
-
 
NC_014165  Tbis_1380  binding-protein-dependent transporter inner membrane component  31.38 
 
 
277 aa  118  9.999999999999999e-26  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.153307 
 
 
-
 
NC_009436  Ent638_1453  alkanesulfonate transporter permease subunit  29.96 
 
 
263 aa  118  9.999999999999999e-26  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_010084  Bmul_1669  binding-protein-dependent transport systems inner membrane component  30.8 
 
 
273 aa  117  1.9999999999999998e-25  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.5369  normal  0.169212 
 
 
-
 
NC_011666  Msil_0772  binding-protein-dependent transport systems inner membrane component  31.22 
 
 
302 aa  117  1.9999999999999998e-25  Methylocella silvestris BL2  Bacteria  n/a    normal  0.0528102 
 
 
-
 
NC_010551  BamMC406_1485  binding-protein-dependent transport systems inner membrane component  30.8 
 
 
270 aa  117  1.9999999999999998e-25  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_011666  Msil_0768  binding-protein-dependent transport systems inner membrane component  30.8 
 
 
286 aa  117  3e-25  Methylocella silvestris BL2  Bacteria  n/a    normal  0.113876 
 
 
-
 
NC_007778  RPB_1488  binding-protein dependent transport system inner membrane protein  31.73 
 
 
280 aa  116  3e-25  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.106569  normal  0.790334 
 
 
-
 
NC_013946  Mrub_1393  binding-protein-dependent transport systems inner membrane component  32.27 
 
 
254 aa  116  3e-25  Meiothermus ruber DSM 1279  Bacteria  normal  0.302994  normal  0.157809 
 
 
-
 
NC_008786  Veis_0765  binding-protein-dependent transport systems inner membrane component  33.48 
 
 
281 aa  117  3e-25  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_4875  binding-protein dependent transport system inner membrane protein  30.96 
 
 
265 aa  116  3.9999999999999997e-25  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.746085  normal 
 
 
-
 
NC_008541  Arth_3035  binding-protein-dependent transport systems inner membrane component  31.54 
 
 
298 aa  116  5e-25  Arthrobacter sp. FB24  Bacteria  normal  0.30367  n/a   
 
 
-
 
NC_008688  Pden_5005  binding-protein-dependent transport systems inner membrane component  30.38 
 
 
289 aa  116  5e-25  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_3008  binding-protein-dependent transport systems inner membrane component  28.77 
 
 
280 aa  115  6e-25  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_3875  binding-protein-dependent transport systems inner membrane component  31.47 
 
 
289 aa  115  6e-25  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_1473  binding-protein dependent transport system inner membrane protein  28.06 
 
 
306 aa  115  8.999999999999998e-25  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.0411979  normal 
 
 
-
 
NC_009012  Cthe_2803  binding-protein-dependent transport systems inner membrane component  30.7 
 
 
259 aa  115  8.999999999999998e-25  Clostridium thermocellum ATCC 27405  Bacteria  hitchhiker  0.00122675  n/a   
 
 
-
 
NC_011981  Avi_7221  ABC transporter membrane spanning protein (nitrate/sulfonates)  30.91 
 
 
282 aa  114  1.0000000000000001e-24  Agrobacterium vitis S4  Bacteria  normal  0.735165  n/a   
 
 
-
 
NC_009972  Haur_2787  binding-protein-dependent transport systems inner membrane component  29.62 
 
 
272 aa  115  1.0000000000000001e-24  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.334714  n/a   
 
 
-
 
NC_008825  Mpe_A0926  nitrate ABC transporter, permease protein, putative  31.85 
 
 
274 aa  115  1.0000000000000001e-24  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_012560  Avin_44530  Binding-protein-dependent transport systems inner membrane component  34.33 
 
 
259 aa  115  1.0000000000000001e-24  Azotobacter vinelandii DJ  Bacteria  normal  0.0634098  n/a   
 
 
-
 
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