More than 300 homologs were found in PanDaTox collection
for query gene Bcav_0128 on replicon NC_012669
Organism: Beutenbergia cavernae DSM 12333



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012669  Bcav_0128  binding-protein-dependent transport systems inner membrane component  100 
 
 
311 aa  605  9.999999999999999e-173  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.727774  normal 
 
 
-
 
NC_013526  Tter_1962  binding-protein-dependent transport systems inner membrane component  38.06 
 
 
319 aa  194  2e-48  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.636111  n/a   
 
 
-
 
NC_008578  Acel_0435  binding-protein-dependent transport systems inner membrane component  37.12 
 
 
313 aa  148  1.0000000000000001e-34  Acidothermus cellulolyticus 11B  Bacteria  normal  normal  0.607095 
 
 
-
 
NC_012669  Bcav_0146  binding-protein-dependent transport systems inner membrane component  34.95 
 
 
292 aa  142  8e-33  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0896196  normal 
 
 
-
 
NC_007963  Csal_2737  binding-protein-dependent transport systems inner membrane component  34.69 
 
 
292 aa  139  7e-32  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.161235  n/a   
 
 
-
 
NC_011886  Achl_3074  binding-protein-dependent transport systems inner membrane component  32.79 
 
 
314 aa  139  7e-32  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013739  Cwoe_4424  binding-protein-dependent transport systems inner membrane component  35.74 
 
 
310 aa  137  3.0000000000000003e-31  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.412484 
 
 
-
 
NC_008025  Dgeo_1168  binding-protein-dependent transport systems inner membrane component  33.09 
 
 
310 aa  136  6.0000000000000005e-31  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.155614  normal 
 
 
-
 
NC_013174  Jden_0512  binding-protein-dependent transport systems inner membrane component  30.23 
 
 
318 aa  135  7.000000000000001e-31  Jonesia denitrificans DSM 20603  Bacteria  hitchhiker  0.000000473727  hitchhiker  0.00124128 
 
 
-
 
NC_013172  Bfae_28370  carbohydrate ABC transporter membrane protein  32.74 
 
 
287 aa  135  8e-31  Brachybacterium faecium DSM 4810  Bacteria  normal  0.096742  n/a   
 
 
-
 
NC_009654  Mmwyl1_0605  binding-protein-dependent transport systems inner membrane component  33.46 
 
 
292 aa  134  1.9999999999999998e-30  Marinomonas sp. MWYL1  Bacteria  normal  hitchhiker  0.0000237389 
 
 
-
 
NC_007513  Syncc9902_1051  lactose transport system permease protein  32.62 
 
 
306 aa  133  3.9999999999999996e-30  Synechococcus sp. CC9902  Bacteria  normal  0.390377  n/a   
 
 
-
 
NC_014165  Tbis_2414  binding-protein-dependent transporter inner membrane component  31.91 
 
 
294 aa  132  6.999999999999999e-30  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_004311  BRA0656  glycerol-3-phosphate ABC transporter, permease protein  33.7 
 
 
293 aa  132  7.999999999999999e-30  Brucella suis 1330  Bacteria  normal  0.552753  n/a   
 
 
-
 
NC_009504  BOV_A0618  glycerol-3-phosphate ABC transporter, permease protein  33.7 
 
 
293 aa  132  7.999999999999999e-30  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_010622  Bphy_2350  binding-protein-dependent transport systems inner membrane component  31.03 
 
 
317 aa  132  1.0000000000000001e-29  Burkholderia phymatum STM815  Bacteria  normal  normal  0.143445 
 
 
-
 
NC_011884  Cyan7425_0944  binding-protein-dependent transport systems inner membrane component  34.02 
 
 
290 aa  131  1.0000000000000001e-29  Cyanothece sp. PCC 7425  Bacteria  normal  0.120711  normal  0.307929 
 
 
-
 
NC_009668  Oant_3751  binding-protein-dependent transport systems inner membrane component  34.33 
 
 
293 aa  131  1.0000000000000001e-29  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.412019  n/a   
 
 
-
 
NC_012848  Rleg_4872  binding-protein-dependent transport systems inner membrane component  30.52 
 
 
310 aa  130  2.0000000000000002e-29  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.181942  normal  0.51159 
 
 
-
 
NC_013411  GYMC61_3365  binding-protein-dependent transport systems inner membrane component  33.71 
 
 
292 aa  130  3e-29  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013501  Rmar_0359  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
300 aa  130  3e-29  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_3567  binding-protein-dependent transport systems inner membrane component  31.29 
 
 
309 aa  130  3e-29  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_006368  lpp1696  hypothetical protein  29.79 
 
 
292 aa  129  5.0000000000000004e-29  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_014213  Mesil_3421  binding-protein-dependent transport systems inner membrane component  32.89 
 
 
307 aa  129  6e-29  Meiothermus silvanus DSM 9946  Bacteria  normal  0.556907  normal 
 
 
-
 
NC_014213  Mesil_3227  extracellular solute-binding protein family 1  32.89 
 
 
307 aa  129  6e-29  Meiothermus silvanus DSM 9946  Bacteria  decreased coverage  0.00159401  normal  0.987884 
 
 
-
 
NC_006369  lpl1695  hypothetical protein  29.43 
 
 
292 aa  128  1.0000000000000001e-28  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_013526  Tter_2292  binding-protein-dependent transport systems inner membrane component  31.65 
 
 
306 aa  128  1.0000000000000001e-28  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_0898  binding-protein-dependent transport systems inner membrane component  31.39 
 
 
319 aa  128  1.0000000000000001e-28  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.14469  n/a   
 
 
-
 
NC_010552  BamMC406_5488  binding-protein-dependent transport systems inner membrane component  30.41 
 
 
319 aa  127  2.0000000000000002e-28  Burkholderia ambifaria MC40-6  Bacteria  normal  0.80176  hitchhiker  0.000205378 
 
 
-
 
NC_012669  Bcav_1297  binding-protein-dependent transport systems inner membrane component  31.39 
 
 
279 aa  127  2.0000000000000002e-28  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.983189  normal 
 
 
-
 
NC_013093  Amir_4610  binding-protein-dependent transport systems inner membrane component  32.28 
 
 
311 aa  127  2.0000000000000002e-28  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_010515  Bcenmc03_4576  binding-protein-dependent transport systems inner membrane component  31.06 
 
 
314 aa  127  2.0000000000000002e-28  Burkholderia cenocepacia MC0-3  Bacteria  normal  hitchhiker  0.00748515 
 
 
-
 
NC_008262  CPR_0905  transmembrane permease MsmF  28.92 
 
 
289 aa  127  2.0000000000000002e-28  Clostridium perfringens SM101  Bacteria  normal  0.0122469  n/a   
 
 
-
 
NC_013739  Cwoe_4453  binding-protein-dependent transport systems inner membrane component  31.38 
 
 
319 aa  127  2.0000000000000002e-28  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_008543  Bcen2424_5659  binding-protein-dependent transport systems inner membrane component  31.4 
 
 
313 aa  127  3e-28  Burkholderia cenocepacia HI2424  Bacteria  normal  0.308138  normal  0.32687 
 
 
-
 
NC_008782  Ajs_0861  binding-protein-dependent transport systems inner membrane component  31.14 
 
 
293 aa  127  3e-28  Acidovorax sp. JS42  Bacteria  normal  normal  0.533828 
 
 
-
 
NC_012669  Bcav_0311  binding-protein-dependent transport systems inner membrane component  29.9 
 
 
321 aa  127  3e-28  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_009429  Rsph17025_3284  maltose-binding periplasmic protein  32.6 
 
 
293 aa  126  4.0000000000000003e-28  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.0588261  normal 
 
 
-
 
NC_012669  Bcav_2817  binding-protein-dependent transport systems inner membrane component  32.43 
 
 
310 aa  126  4.0000000000000003e-28  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.822068  normal 
 
 
-
 
NC_010003  Pmob_0524  binding-protein-dependent transport systems inner membrane component  31.49 
 
 
303 aa  127  4.0000000000000003e-28  Petrotoga mobilis SJ95  Bacteria  normal  0.693678  n/a   
 
 
-
 
NC_010002  Daci_5466  binding-protein-dependent transport systems inner membrane component  31.6 
 
 
293 aa  126  5e-28  Delftia acidovorans SPH-1  Bacteria  normal  0.0543502  normal 
 
 
-
 
NC_012669  Bcav_2264  binding-protein-dependent transport systems inner membrane component  32.32 
 
 
307 aa  126  5e-28  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.277747  normal 
 
 
-
 
NC_013521  Sked_05430  carbohydrate ABC transporter membrane protein  30.92 
 
 
321 aa  126  5e-28  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.0550121  normal 
 
 
-
 
NC_012669  Bcav_0941  binding-protein-dependent transport systems inner membrane component  32.37 
 
 
313 aa  126  5e-28  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.737632 
 
 
-
 
NC_011992  Dtpsy_0790  binding-protein-dependent transport systems inner membrane component  30.8 
 
 
293 aa  126  5e-28  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_2365  sugar ABC transporter, permease protein  32.74 
 
 
288 aa  126  5e-28  Streptosporangium roseum DSM 43021  Bacteria  normal  0.216835  normal 
 
 
-
 
NC_013526  Tter_2000  binding-protein-dependent transport systems inner membrane component  29.54 
 
 
319 aa  126  5e-28  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_22990  binding-protein-dependent transport systems inner membrane component  31.42 
 
 
286 aa  126  5e-28  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.00000108841  n/a   
 
 
-
 
NC_009939  Dgeo_2918  ABC-type sugar transport system, permease component  32.2 
 
 
305 aa  126  5e-28  Deinococcus geothermalis DSM 11300  Bacteria  n/a    n/a   
 
 
-
 
NC_007948  Bpro_0856  binding-protein-dependent transport systems inner membrane component  32.18 
 
 
293 aa  126  6e-28  Polaromonas sp. JS666  Bacteria  normal  normal  0.565462 
 
 
-
 
NC_009664  Krad_0590  binding-protein-dependent transport systems inner membrane component  33.45 
 
 
322 aa  126  6e-28  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0414899  normal  0.0385996 
 
 
-
 
NC_008061  Bcen_5200  binding-protein-dependent transport systems inner membrane component  31.06 
 
 
313 aa  125  7e-28  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_20620  binding-protein-dependent transport systems inner membrane component  27.7 
 
 
299 aa  125  7e-28  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_03080  permease component of ABC-type sugar transporter  31.21 
 
 
322 aa  125  9e-28  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.151535  normal 
 
 
-
 
NC_013526  Tter_2527  binding-protein-dependent transport systems inner membrane component  34.87 
 
 
309 aa  125  1e-27  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.849073  n/a   
 
 
-
 
NC_012793  GWCH70_1390  binding-protein-dependent transport systems inner membrane component  30.21 
 
 
308 aa  125  1e-27  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_4568  binding-protein-dependent transport systems inner membrane component  31.15 
 
 
352 aa  125  1e-27  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_007434  BURPS1710b_3725  binding-protein-dependent transporter inner membrane protein  31.82 
 
 
322 aa  124  2e-27  Burkholderia pseudomallei 1710b  Bacteria  normal  0.119738  n/a   
 
 
-
 
NC_007516  Syncc9605_1449  lactose transport system permease protein  30.85 
 
 
290 aa  124  2e-27  Synechococcus sp. CC9605  Bacteria  normal  normal  0.0650773 
 
 
-
 
NC_008709  Ping_2094  sn-glycerol-3-phosphate transport system, binding protein inner membrane component  30.31 
 
 
293 aa  124  2e-27  Psychromonas ingrahamii 37  Bacteria  normal  0.236232  normal  0.396031 
 
 
-
 
NC_010682  Rpic_1093  binding-protein-dependent transport systems inner membrane component  30.53 
 
 
293 aa  124  2e-27  Ralstonia pickettii 12J  Bacteria  normal  0.0106698  normal 
 
 
-
 
NC_012856  Rpic12D_1186  binding-protein-dependent transport systems inner membrane component  30.31 
 
 
293 aa  124  2e-27  Ralstonia pickettii 12D  Bacteria  normal  0.0963268  normal 
 
 
-
 
NC_013411  GYMC61_1728  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
299 aa  124  2e-27  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011988  Avi_5738  ABC transporter membrane spanning protein (sugar)  33.07 
 
 
302 aa  124  2e-27  Agrobacterium vitis S4  Bacteria  normal  0.0678785  n/a   
 
 
-
 
NC_009784  VIBHAR_06397  hypothetical protein  29.89 
 
 
293 aa  124  2e-27  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013172  Bfae_29330  permease component of ABC-type sugar transporter  30.79 
 
 
321 aa  123  3e-27  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I3020  glycerol-3-phosphate ABC transporter, permease protein  31.15 
 
 
319 aa  123  3e-27  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_20510  binding-protein-dependent transport systems inner membrane component  32.7 
 
 
290 aa  124  3e-27  Halothermothrix orenii H 168  Bacteria  normal  0.0790749  n/a   
 
 
-
 
NC_008391  Bamb_4933  binding-protein-dependent transport systems inner membrane component  30.43 
 
 
314 aa  124  3e-27  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.103484 
 
 
-
 
NC_009074  BURPS668_3696  sn-glycerol-3-phosphate transport system permease protein ugpA  31.82 
 
 
322 aa  124  3e-27  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009565  TBFG_12339  sugar-transport integral membrane protein ABC transporter uspA  30.96 
 
 
290 aa  123  3e-27  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_003295  RSc1265  SN-glycerol-3-phosphate transmembrane ABC transporter protein  30.31 
 
 
293 aa  123  5e-27  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_0185  binding-protein-dependent transport systems inner membrane component  30.74 
 
 
315 aa  123  5e-27  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_011370  Rleg2_6091  binding-protein-dependent transport systems inner membrane component  32.65 
 
 
292 aa  122  5e-27  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_009952  Dshi_2015  sn-glycerol-3-phosphate transport system permease protein  32.53 
 
 
293 aa  123  5e-27  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.960254  normal  0.0166365 
 
 
-
 
NC_012669  Bcav_2875  binding-protein-dependent transport systems inner membrane component  34.44 
 
 
318 aa  122  6e-27  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.847542  normal  0.0272583 
 
 
-
 
NC_011981  Avi_7347  ABC transporter membrane spanning protein (sugar)  30.77 
 
 
320 aa  122  6e-27  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_010816  BLD_1486  MalF-type ABC sugar transport systems permease component  32.14 
 
 
309 aa  122  6e-27  Bifidobacterium longum DJO10A  Bacteria  normal  0.0456684  n/a   
 
 
-
 
NC_010483  TRQ2_1695  binding-protein-dependent transport systems inner membrane component  30.18 
 
 
288 aa  122  7e-27  Thermotoga sp. RQ2  Bacteria  normal  0.967188  n/a   
 
 
-
 
NC_013526  Tter_2208  binding-protein-dependent transport systems inner membrane component  33 
 
 
306 aa  122  7e-27  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.739705  n/a   
 
 
-
 
NC_007413  Ava_0563  binding-protein dependent transport system inner membrane protein  34.14 
 
 
294 aa  122  8e-27  Anabaena variabilis ATCC 29413  Bacteria  normal  0.22835  normal  0.0558608 
 
 
-
 
NC_008048  Sala_1022  binding-protein-dependent transport systems inner membrane component  32.99 
 
 
294 aa  122  8e-27  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_1647  binding-protein-dependent transport systems inner membrane component  34.23 
 
 
294 aa  122  8e-27  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.123391 
 
 
-
 
NC_010184  BcerKBAB4_0481  binding-protein-dependent transport systems inner membrane component  31.19 
 
 
310 aa  122  9e-27  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_3651  binding-protein-dependent transport systems inner membrane component  32.77 
 
 
301 aa  122  9e-27  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0332234  normal 
 
 
-
 
NC_013595  Sros_6194  binding-protein-dependent transport systems inner membrane component  30.69 
 
 
303 aa  122  9e-27  Streptosporangium roseum DSM 43021  Bacteria  normal  0.209211  normal  0.916696 
 
 
-
 
NC_014158  Tpau_1637  binding-protein-dependent transport systems inner membrane component  32.13 
 
 
303 aa  122  9.999999999999999e-27  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.0695484  n/a   
 
 
-
 
NC_013525  Tter_0830  binding-protein-dependent transport systems inner membrane component  30.69 
 
 
309 aa  122  9.999999999999999e-27  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_012880  Dd703_0068  binding-protein-dependent transport systems inner membrane component  29.96 
 
 
315 aa  121  9.999999999999999e-27  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_1286  binding-protein-dependent transport systems inner membrane component  31.14 
 
 
293 aa  121  9.999999999999999e-27  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_3588  binding-protein-dependent transport systems inner membrane component  33.94 
 
 
338 aa  122  9.999999999999999e-27  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.786552  normal 
 
 
-
 
NC_008785  BMASAVP1_A3210  glycerol-3-phosphate ABC transporter, permease protein  33.09 
 
 
294 aa  122  9.999999999999999e-27  Burkholderia mallei SAVP1  Bacteria  normal  0.0692597  n/a   
 
 
-
 
NC_008836  BMA10229_A1761  glycerol-3-phosphate ABC transporter, permease protein  33.09 
 
 
294 aa  122  9.999999999999999e-27  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009050  Rsph17029_4021  binding-protein-dependent transport systems inner membrane component  31.79 
 
 
293 aa  121  9.999999999999999e-27  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_009076  BURPS1106A_3754  sn-glycerol-3-phosphate transport system permease protein ugpA  33.09 
 
 
294 aa  122  9.999999999999999e-27  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_2793  glycerol-3-phosphate ABC transporter, permease protein  33.09 
 
 
294 aa  122  9.999999999999999e-27  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_011661  Dtur_0174  binding-protein-dependent transport systems inner membrane component  30.27 
 
 
290 aa  121  9.999999999999999e-27  Dictyoglomus turgidum DSM 6724  Bacteria  normal  0.417375  n/a   
 
 
-
 
NC_011831  Cagg_2266  binding-protein-dependent transport systems inner membrane component  35.43 
 
 
296 aa  121  1.9999999999999998e-26  Chloroflexus aggregans DSM 9485  Bacteria  normal  hitchhiker  0.0000392628 
 
 
-
 
NC_012793  GWCH70_1464  binding-protein-dependent transport systems inner membrane component  31.23 
 
 
292 aa  121  1.9999999999999998e-26  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_0406  binding-protein-dependent transport systems inner membrane component  32.18 
 
 
293 aa  120  1.9999999999999998e-26  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
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