| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_0128 |
|---|
| Symbol | |
|---|
| ID | 7859293 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | + |
|---|
| Start bp | 133761 |
|---|
| End bp | 134696 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 643864205 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_002880155 |
|---|
| Protein GI | 229818629 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.727774 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGAATCC TCGCAGTGCG CGAGGGCGGG GACGTCGCCG CCGTGACGTC CCCCCCGAGC
GAACGCCAGA GCAGGCTCGC TCGGCGCGGA CGGATGATCG GGCTCGCCGC CGTGCTCCCG
GCGTTCCTCG TGGTCGTCGG GTTCATGATC TACCCGGTGC TGTTCGCGTT GTACATCTCG
TTCAACGACT CGAACGGCTT GCGGTTCGAC TGGGTCGGGC TGGCCAACTA CCTGGACATC
CTGGCCGACC CGCAGGTCCA CCAGATCTTC ATCACGAACC TCAAGTTCCT GATCTCGGTT
CCGCTCGTGA TCTTCGCCGC GCTCGTGGTG TCGATCCTGC TGTTCGAGCG CATCCGCGGC
TGGCGGGCGT TCCGCGTGCT CTTCTTCCTG CCGAACGTCC TGTCCGCCGC CGTCATCGGC
ATCATGTTCA AGTCGGTGTT CGGGTACAAC GGTCCGTTCA TGGCGGCGCT CGAGGCGCTC
GGCGGTGAGC GCATCGACCC GTTCGTCGAC GGGAACCTCG CGATCGCCGT CATCGTGCTG
GCCCTCGTCT GGTCCGGGTT CGGCTACCAG AGCCTGCTCC TGCTCAGCGG GCTGACGGCG
ATCGACCCCG CGGTGTTCGA GGCCGCGGCG CTCGACGGCG CGGGGTGGTG GACCCGGTTG
TGGCACATCA CGCTGCCGAA CATCCGGCGC GTGCTCGGCT TCGTGTTCAT CATCAACGTG
CTCTACACGT TCTCGTCGCT GTTCGGCTTC GTCTTCGTGA TGACAGCCGG CGGCCCCGGG
TTCGAGACGA CGACGCTGGA CTACCTGGTC TATCTGCGGG CGTTCTCGAC GTCGAACCTC
GGCTCCGGCG CCGCCCTCGC CGTCCTGCTC TTCATGTTCA TCGGGCTCCT GACGCTCGTG
CAGGCGCGGT TCTTCAAGCT CTCGGAGGAC GACTGA
|
|---|
| Protein sequence | MGILAVREGG DVAAVTSPPS ERQSRLARRG RMIGLAAVLP AFLVVVGFMI YPVLFALYIS
FNDSNGLRFD WVGLANYLDI LADPQVHQIF ITNLKFLISV PLVIFAALVV SILLFERIRG
WRAFRVLFFL PNVLSAAVIG IMFKSVFGYN GPFMAALEAL GGERIDPFVD GNLAIAVIVL
ALVWSGFGYQ SLLLLSGLTA IDPAVFEAAA LDGAGWWTRL WHITLPNIRR VLGFVFIINV
LYTFSSLFGF VFVMTAGGPG FETTTLDYLV YLRAFSTSNL GSGAALAVLL FMFIGLLTLV
QARFFKLSED D
|
|---|
| |