More than 300 homologs were found in PanDaTox collection
for query gene Xaut_0498 on replicon NC_009720
Organism: Xanthobacter autotrophicus Py2



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009720  Xaut_0498  binding-protein-dependent transport systems inner membrane component  100 
 
 
219 aa  440  1e-123  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_009620  Smed_4330  binding-protein-dependent transport systems inner membrane component  88.2 
 
 
299 aa  293  2e-78  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.0255144 
 
 
-
 
NC_011366  Rleg2_5715  binding-protein-dependent transport systems inner membrane component  87.58 
 
 
311 aa  291  4e-78  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.578248 
 
 
-
 
NC_012848  Rleg_5335  binding-protein-dependent transport systems inner membrane component  87.58 
 
 
299 aa  291  4e-78  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.494114 
 
 
-
 
NC_007948  Bpro_1260  binding-protein-dependent transport systems inner membrane component  80.75 
 
 
291 aa  273  1.0000000000000001e-72  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_2890  binding-protein-dependent transport systems inner membrane component  70.86 
 
 
312 aa  257  9e-68  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.908761  normal  0.323454 
 
 
-
 
NC_007925  RPC_3644  binding-protein-dependent transport systems inner membrane component  67.98 
 
 
306 aa  256  1e-67  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.433095 
 
 
-
 
NC_011894  Mnod_1415  binding-protein-dependent transport systems inner membrane component  70.06 
 
 
292 aa  255  3e-67  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_3320  binding-protein-dependent transport systems inner membrane component  70.29 
 
 
306 aa  255  4e-67  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.516891  normal 
 
 
-
 
NC_010511  M446_0820  binding-protein-dependent transport systems inner membrane component  70.29 
 
 
291 aa  254  5e-67  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_3958  binding-protein-dependent transport systems inner membrane component  69.71 
 
 
308 aa  254  6e-67  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.809225  n/a   
 
 
-
 
NC_007778  RPB_2099  binding-protein dependent transport system inner membrane protein  69.71 
 
 
307 aa  254  8e-67  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.642563  decreased coverage  0.0000998416 
 
 
-
 
NC_009485  BBta_3556  putative ABC transporter permease protein  73.29 
 
 
302 aa  254  1.0000000000000001e-66  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_011891  A2cp1_3316  binding-protein-dependent transport systems inner membrane component  53.11 
 
 
281 aa  182  3e-45  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_3122  ABC sugar transporter, inner membrane subunit  55.9 
 
 
281 aa  181  6e-45  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_3230  binding-protein-dependent transport systems inner membrane component  53.11 
 
 
281 aa  181  7e-45  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_1664  binding-protein-dependent transport systems inner membrane component  55.28 
 
 
281 aa  178  5.999999999999999e-44  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.150444  normal 
 
 
-
 
NC_007964  Nham_1209  binding-protein-dependent transport systems inner membrane component  50 
 
 
284 aa  177  1e-43  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_007973  Rmet_0008  binding-protein-dependent transport systems inner membrane component  48.86 
 
 
295 aa  168  6e-41  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_4119  ABC transporter permease protein  46.71 
 
 
303 aa  162  5.0000000000000005e-39  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0396939  normal  0.542053 
 
 
-
 
NC_007778  RPB_2548  binding-protein dependent transport system inner membrane protein  44.91 
 
 
304 aa  160  2e-38  Rhodopseudomonas palustris HaA2  Bacteria  decreased coverage  0.00362276  normal 
 
 
-
 
NC_007958  RPD_2908  binding-protein-dependent transport systems inner membrane component  45.51 
 
 
303 aa  159  2e-38  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.265009  normal  0.0499964 
 
 
-
 
NC_011368  Rleg2_5474  binding-protein-dependent transport systems inner membrane component  43.83 
 
 
280 aa  142  4e-33  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.9066  normal  0.435889 
 
 
-
 
NC_012848  Rleg_5211  binding-protein-dependent transport systems inner membrane component  43.83 
 
 
281 aa  142  4e-33  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.610418 
 
 
-
 
NC_013521  Sked_02950  carbohydrate ABC transporter membrane protein  39.11 
 
 
297 aa  141  8e-33  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_008243  Meso_4515  binding-protein-dependent transport systems inner membrane component  44.1 
 
 
275 aa  136  3.0000000000000003e-31  Chelativorans sp. BNC1  Bacteria  normal  0.275064  n/a   
 
 
-
 
NC_008786  Veis_1881  binding-protein-dependent transport systems inner membrane component  39.77 
 
 
277 aa  135  5e-31  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.31192  normal  0.345507 
 
 
-
 
NC_008699  Noca_1418  binding-protein-dependent transport systems inner membrane component  41.71 
 
 
276 aa  132  6e-30  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_00800  binding-protein-dependent transport systems inner membrane component  41.14 
 
 
280 aa  130  2.0000000000000002e-29  Halothermothrix orenii H 168  Bacteria  normal  0.303025  n/a   
 
 
-
 
NC_008699  Noca_0871  binding-protein-dependent transport systems inner membrane component  44.1 
 
 
284 aa  129  4.0000000000000003e-29  Nocardioides sp. JS614  Bacteria  normal  0.288507  n/a   
 
 
-
 
NC_010320  Teth514_0395  binding-protein-dependent transport systems inner membrane component  37.99 
 
 
277 aa  126  2.0000000000000002e-28  Thermoanaerobacter sp. X514  Bacteria  normal  0.230637  n/a   
 
 
-
 
NC_013946  Mrub_2088  binding-protein-dependent transport systems inner membrane component  39.3 
 
 
282 aa  126  2.0000000000000002e-28  Meiothermus ruber DSM 1279  Bacteria  hitchhiker  0.00655693  normal  0.897951 
 
 
-
 
NC_004311  BRA0306  sugar ABC transporter, permease protein  39.89 
 
 
275 aa  125  5e-28  Brucella suis 1330  Bacteria  normal  0.147324  n/a   
 
 
-
 
NC_009668  Oant_2942  binding-protein-dependent transport systems inner membrane component  39.89 
 
 
275 aa  125  6e-28  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.667129  n/a   
 
 
-
 
NC_009436  Ent638_2162  binding-protein-dependent transport systems inner membrane component  37.99 
 
 
280 aa  125  7e-28  Enterobacter sp. 638  Bacteria  normal  normal  0.250115 
 
 
-
 
NC_011353  ECH74115_1957  putative sugar ABC transporter, permease protein  38.55 
 
 
280 aa  124  8.000000000000001e-28  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.605299  normal  0.820662 
 
 
-
 
NC_010498  EcSMS35_1810  putative sugar ABC transporter, permease protein  38.55 
 
 
280 aa  124  8.000000000000001e-28  Escherichia coli SMS-3-5  Bacteria  normal  0.817708  normal 
 
 
-
 
CP001509  ECD_01289  predicted sugar transporter subunit: membrane component of ABC superfamily  38.55 
 
 
280 aa  124  1e-27  Escherichia coli BL21(DE3)  Bacteria  normal  0.553016  n/a   
 
 
-
 
CP001637  EcDH1_2334  binding-protein-dependent transport systems inner membrane component  38.55 
 
 
280 aa  124  1e-27  Escherichia coli DH1  Bacteria  normal  0.240108  n/a   
 
 
-
 
NC_009800  EcHS_A1427  putative sugar ABC transporter, permease protein  38.55 
 
 
280 aa  124  1e-27  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_012892  B21_01300  hypothetical protein  38.55 
 
 
280 aa  124  1e-27  Escherichia coli BL21  Bacteria  normal  0.534807  n/a   
 
 
-
 
NC_010468  EcolC_2313  binding-protein-dependent transport systems inner membrane component  38.55 
 
 
280 aa  124  1e-27  Escherichia coli ATCC 8739  Bacteria  normal  0.676844  normal 
 
 
-
 
NC_009801  EcE24377A_1522  putative sugar ABC transporter, permease protein  38.55 
 
 
280 aa  124  1e-27  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_009620  Smed_4398  binding-protein-dependent transport systems inner membrane component  44.91 
 
 
292 aa  124  2e-27  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.445244 
 
 
-
 
NC_011899  Hore_19870  binding-protein-dependent transport systems inner membrane component  37.5 
 
 
285 aa  122  3e-27  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_0448  binding-protein-dependent transport systems inner membrane component  39.34 
 
 
277 aa  122  5e-27  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013202  Hmuk_0942  binding-protein-dependent transport systems inner membrane component  36.93 
 
 
280 aa  122  5e-27  Halomicrobium mukohataei DSM 12286  Archaea  normal  normal  0.41482 
 
 
-
 
NC_013172  Bfae_25430  carbohydrate ABC transporter membrane protein  41.18 
 
 
275 aa  121  6e-27  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0542318  n/a   
 
 
-
 
NC_004578  PSPTO_0887  sugar ABC transporter, permease protein  40.68 
 
 
280 aa  121  7e-27  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.453961  n/a   
 
 
-
 
NC_007005  Psyr_0760  binding-protein dependent transport system inner membrane protein  40.68 
 
 
280 aa  121  7e-27  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0312496  normal  0.789995 
 
 
-
 
NC_011145  AnaeK_4265  binding-protein-dependent transport systems inner membrane component  41.61 
 
 
293 aa  121  7e-27  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_012858  Rleg_6792  binding-protein-dependent transport systems inner membrane component  37.5 
 
 
285 aa  121  7e-27  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_009832  Spro_2524  binding-protein-dependent transport systems inner membrane component  42.18 
 
 
281 aa  121  8e-27  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_012848  Rleg_4865  binding-protein-dependent transport systems inner membrane component  40.37 
 
 
296 aa  121  8e-27  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.174421 
 
 
-
 
NC_011891  A2cp1_4287  binding-protein-dependent transport systems inner membrane component  41.61 
 
 
293 aa  121  8e-27  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_1682  binding-protein-dependent transport systems inner membrane component  37.74 
 
 
275 aa  120  9.999999999999999e-27  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.299262  normal 
 
 
-
 
NC_013739  Cwoe_5095  binding-protein-dependent transport systems inner membrane component  41.42 
 
 
273 aa  120  9.999999999999999e-27  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.336394 
 
 
-
 
NC_014210  Ndas_3334  binding-protein-dependent transport systems inner membrane component  39.41 
 
 
299 aa  120  9.999999999999999e-27  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2701  binding-protein-dependent transport systems inner membrane component  42.58 
 
 
275 aa  121  9.999999999999999e-27  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.0563997  n/a   
 
 
-
 
NC_013411  GYMC61_2957  binding-protein-dependent transport systems inner membrane component  38.89 
 
 
275 aa  121  9.999999999999999e-27  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_007952  Bxe_B0078  ABC sugar transporter, inner membrane subunit  39.13 
 
 
293 aa  120  1.9999999999999998e-26  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_0023  binding-protein-dependent transport systems inner membrane component  43.54 
 
 
277 aa  120  1.9999999999999998e-26  Marinomonas sp. MWYL1  Bacteria  normal  0.275556  normal  0.424969 
 
 
-
 
NC_011369  Rleg2_3667  binding-protein-dependent transport systems inner membrane component  40.37 
 
 
296 aa  120  1.9999999999999998e-26  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_010003  Pmob_0029  binding-protein-dependent transport systems inner membrane component  41.22 
 
 
283 aa  119  3e-26  Petrotoga mobilis SJ95  Bacteria  unclonable  0.0000000511748  n/a   
 
 
-
 
NC_007760  Adeh_4134  ABC sugar transporter, inner membrane subunit  40.99 
 
 
295 aa  119  3.9999999999999996e-26  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_0972  binding-protein-dependent transport systems inner membrane component  37.02 
 
 
278 aa  119  3.9999999999999996e-26  Thermotoga sp. RQ2  Bacteria  hitchhiker  0.00136246  n/a   
 
 
-
 
NC_009486  Tpet_0956  binding-protein-dependent transport systems inner membrane component  37.02 
 
 
278 aa  119  3.9999999999999996e-26  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_008254  Meso_2303  binding-protein-dependent transport systems inner membrane component  36.42 
 
 
275 aa  119  4.9999999999999996e-26  Chelativorans sp. BNC1  Bacteria  normal  0.313337  n/a   
 
 
-
 
NC_012853  Rleg_5696  binding-protein-dependent transport systems inner membrane component  38.33 
 
 
283 aa  117  9.999999999999999e-26  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.697019  normal  0.0828938 
 
 
-
 
NC_008687  Pden_4440  binding-protein-dependent transport systems inner membrane component  37.08 
 
 
277 aa  117  9.999999999999999e-26  Paracoccus denitrificans PD1222  Bacteria  normal  0.062682  normal 
 
 
-
 
NC_008698  Tpen_1617  binding-protein-dependent transport systems inner membrane component  39.2 
 
 
291 aa  117  9.999999999999999e-26  Thermofilum pendens Hrk 5  Archaea  normal  0.333529  n/a   
 
 
-
 
NC_014165  Tbis_1103  binding-protein-dependent transporter inner membrane component  40.59 
 
 
283 aa  117  9.999999999999999e-26  Thermobispora bispora DSM 43833  Bacteria  normal  0.216355  normal  0.105298 
 
 
-
 
NC_013595  Sros_2192  putative sugar ABC transporter, permease protein  38.64 
 
 
283 aa  117  1.9999999999999998e-25  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_2542  binding-protein-dependent transport systems inner membrane component  38.67 
 
 
275 aa  117  1.9999999999999998e-25  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.607728  normal 
 
 
-
 
NC_009338  Mflv_3853  binding-protein-dependent transport systems inner membrane component  38.67 
 
 
275 aa  116  1.9999999999999998e-25  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.0623628 
 
 
-
 
NC_013595  Sros_7723  binding-protein-dependent transport systems inner membrane component  36.76 
 
 
279 aa  116  3e-25  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_007802  Jann_4088  binding-protein-dependent transport systems inner membrane component  33.16 
 
 
275 aa  115  3.9999999999999997e-25  Jannaschia sp. CCS1  Bacteria  normal  normal  0.350213 
 
 
-
 
NC_011899  Hore_04600  binding-protein-dependent transport systems inner membrane component  38.75 
 
 
277 aa  115  3.9999999999999997e-25  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_0399  binding-protein-dependent transport systems inner membrane component  39.33 
 
 
286 aa  115  3.9999999999999997e-25  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009636  Smed_0188  binding-protein-dependent transport systems inner membrane component  40.62 
 
 
277 aa  115  3.9999999999999997e-25  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_007494  RSP_3672  ABC sugar transporter, inner membrane subunit  38.75 
 
 
277 aa  115  5e-25  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.191343  n/a   
 
 
-
 
NC_011899  Hore_19780  binding-protein-dependent transport systems inner membrane component  35.33 
 
 
253 aa  115  5e-25  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_009050  Rsph17029_3407  binding-protein-dependent transport systems inner membrane component  38.75 
 
 
277 aa  115  5e-25  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.353789  normal  0.790416 
 
 
-
 
NC_007802  Jann_3555  binding-protein-dependent transport systems inner membrane component  36.57 
 
 
279 aa  115  6e-25  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_0067  binding-protein-dependent transport systems inner membrane component  37.27 
 
 
282 aa  115  6e-25  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_010623  Bphy_4059  binding-protein-dependent transport systems inner membrane component  36.46 
 
 
281 aa  115  6e-25  Burkholderia phymatum STM815  Bacteria  normal  0.965906  normal  0.767737 
 
 
-
 
NC_008578  Acel_0554  binding-protein-dependent transport systems inner membrane component  36.36 
 
 
296 aa  115  6e-25  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_008025  Dgeo_0589  binding-protein-dependent transport systems inner membrane component  37.64 
 
 
283 aa  115  6.9999999999999995e-25  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.288724  normal 
 
 
-
 
NC_009718  Fnod_0448  binding-protein-dependent transport systems inner membrane component  36.46 
 
 
281 aa  114  1.0000000000000001e-24  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_004310  BR0237  sugar ABC transporter, permease protein  37.5 
 
 
291 aa  113  2.0000000000000002e-24  Brucella suis 1330  Bacteria  normal  0.963709  n/a   
 
 
-
 
NC_009952  Dshi_3142  sugar ABC transporter  34.09 
 
 
275 aa  113  2.0000000000000002e-24  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.367291  normal 
 
 
-
 
NC_013131  Caci_2624  binding-protein-dependent transport systems inner membrane component  39.44 
 
 
282 aa  114  2.0000000000000002e-24  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.313327  normal 
 
 
-
 
NC_009505  BOV_0230  sugar ABC transporter, permease protein  37.5 
 
 
291 aa  113  2.0000000000000002e-24  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_009616  Tmel_1818  binding-protein-dependent transport systems inner membrane component  35.39 
 
 
279 aa  113  2.0000000000000002e-24  Thermosipho melanesiensis BI429  Bacteria  normal  0.675174  n/a   
 
 
-
 
NC_009620  Smed_3589  binding-protein-dependent transport systems inner membrane component  34.09 
 
 
276 aa  114  2.0000000000000002e-24  Sinorhizobium medicae WSM419  Bacteria  normal  0.577285  normal 
 
 
-
 
NC_008043  TM1040_3397  binding-protein-dependent transport systems inner membrane component  38.64 
 
 
287 aa  113  3e-24  Ruegeria sp. TM1040  Bacteria  normal  0.141396  normal  0.659935 
 
 
-
 
NC_008346  Swol_0403  putative integral membrane transport protein  32.96 
 
 
279 aa  112  3e-24  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_20450  binding-protein-dependent transport systems inner membrane component  36.02 
 
 
277 aa  113  3e-24  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.00000244229  n/a   
 
 
-
 
NC_009636  Smed_2144  binding-protein-dependent transport systems inner membrane component  33.71 
 
 
288 aa  112  4.0000000000000004e-24  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_009667  Oant_0311  binding-protein-dependent transport systems inner membrane component  39.13 
 
 
292 aa  112  5e-24  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.466995  n/a   
 
 
-
 
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