Gene Hmuk_0942 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_0942 
Symbol 
ID8410458 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp904263 
End bp905105 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content62% 
IMG OID645019277 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003176778 
Protein GI257387005 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.41482 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGCCG GCCAGGAGCG CAGCCAGCTC CGCAAAGTCC GTCTCTACGG CGTGTTGATC 
GCGCTGCTGG GGATCATGAT GTTCCCCTTC TACGCGATGT TCTCCAGTAC GTTCAAGCAG
GAGTCGGAGA TCTTCTCCAG TCCGGCGACG CTGTTCCCCT CGGAAGCGTC CGTCCAGTCC
TACATCGAGG TCTGGGGCCA GACCGACGTG TTGCTGTGGG TCGGTAACAG CTTCCTCATC
TCGCTGGGGA CCGTCGCGCT GACGCTGCTG CTGGCGATCC CGGCGGCGTA CTCCTGTGCG
CGAAACGACT TCGTCGGCAA GCGGTCGTTC CTGCTTGCCG TCCTCGTCGT GCAGATGTTC
GCGCCGGTGG TGCTGATCGT CGGCCTGTTC GACGTCATCA CCCAGTTCGG GATCTACAAC
ACGTACCTCG CGGTGATCAT CCCGGCGGCC GCGTTCACGC TGCCGTTCAA CGTCTGGATG
CTGTATGGCT ACTTCCAGAC GATTCCCGAA TCACTGGAGG AATCGGCCCG GATCGACGGG
GCCAGCCAGC GACAGATCCT CACCAAGATC GTGCTCCCGC TGACCAAGCC CGCGCTGGTC
GCGAGCATCA CTTACACGTT CCTCTACGCG TGGAACCGAC TGCTGTTCGT GCTCACCTTC
CTCACCGACG CGGGGAAGTA CAACATCCCA CGCGGGGTGT TCTCGATGGT CGGGGCACTC
CAGACCGACT GGCGGATGAT GCTGACCGTC TCCGTGATCG GCATCCTGCC GCTGTTGGTC
CTGTTTGCCT TCCTCGAAGA GTACATCGTC GCGGGCATGA CTGCCGGCGC GGTCAAGGAG
TAA
 
Protein sequence
MMAGQERSQL RKVRLYGVLI ALLGIMMFPF YAMFSSTFKQ ESEIFSSPAT LFPSEASVQS 
YIEVWGQTDV LLWVGNSFLI SLGTVALTLL LAIPAAYSCA RNDFVGKRSF LLAVLVVQMF
APVVLIVGLF DVITQFGIYN TYLAVIIPAA AFTLPFNVWM LYGYFQTIPE SLEESARIDG
ASQRQILTKI VLPLTKPALV ASITYTFLYA WNRLLFVLTF LTDAGKYNIP RGVFSMVGAL
QTDWRMMLTV SVIGILPLLV LFAFLEEYIV AGMTAGAVKE