Gene Rmet_0008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_0008 
Symbol 
ID4036792 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp12151 
End bp13038 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content61% 
IMG OID637975380 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_582163 
Protein GI94308953 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones52 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGCGA TATCGACATC CGGAGGCTGG AAGCTGGCGT GGCTCGGGTC GCGCTGGCCC 
GCACGCTGCG CGTGGGTAGC GGTGTTCGCC ACGTTGGCGA CTTTTGCCGT GTTCTGCGCC
TTTCCGTTCT ACTGGATGCT GATCACCACG TTCAAGGATG TGCACGACCT GATCAACACG
GCCAACAATC CGTTCGTGTT CAATCTGCCA CCCACGACGG AGAACCTGCG GGTGCTGTTC
CAGGAAACCG CATTCCTGCG ATGGCTGCTC AACACGCTGC TGGTGGGCGT TTTCGTGGTC
ATCATCACGC TCGTGCTCGC GGTACCGGCG GGCTACAGCC TGGCGCGACT ATCGGGACCC
CGAGGGCGGC AACTCGCCAT CGCCATCTTC CTGACTTATC TGATTCCGCC CACGATCCTG
TTCATTCCGT TCTCCCGCAT CGTCGGCGCG CTGGGCCTGC AGGACTCGCT CTGGTCGCTC
GTGCTCGTGT ACCCGAGCTT TACCGTGCCG TTCTGCACCT GGCTGATGAT GGGCTTCTTC
AAGGCGGTGC CCCGGGACAT CGAGGAAGCC GCGATGATGG ATGGCATGAG CCGCTTTGGC
GCGTTCCTGA AAGTCATCGT GCCGCTATCG TCAGCGGGCA TTCTCACCGT GATCATCTTC
ACGCTGACGC TGGTGATGCA GGAGTTCGTC TACGCGCTGA CGTTCATCAC GAGTTCCTCG
CAGTACACGG TCAGCGTGGG CGTGCCCACT TTCCTTGTGC GCGGCGACGT CTATTTCTGG
GGCTCGCTGA TGGGTGCATG CCTGATCGTC AGCGTGCCGG TAGCGCTGCT GTACAACGTG
TTCCTCGATC GCTTTGTCAC CGCTTTCACC GTGGGCGCGA TAAAGTAG
 
Protein sequence
MEAISTSGGW KLAWLGSRWP ARCAWVAVFA TLATFAVFCA FPFYWMLITT FKDVHDLINT 
ANNPFVFNLP PTTENLRVLF QETAFLRWLL NTLLVGVFVV IITLVLAVPA GYSLARLSGP
RGRQLAIAIF LTYLIPPTIL FIPFSRIVGA LGLQDSLWSL VLVYPSFTVP FCTWLMMGFF
KAVPRDIEEA AMMDGMSRFG AFLKVIVPLS SAGILTVIIF TLTLVMQEFV YALTFITSSS
QYTVSVGVPT FLVRGDVYFW GSLMGACLIV SVPVALLYNV FLDRFVTAFT VGAIK