Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_0008 |
Symbol | |
ID | 4036792 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | - |
Start bp | 12151 |
End bp | 13038 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637975380 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_582163 |
Protein GI | 94308953 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0395] ABC-type sugar transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 52 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAGCGA TATCGACATC CGGAGGCTGG AAGCTGGCGT GGCTCGGGTC GCGCTGGCCC GCACGCTGCG CGTGGGTAGC GGTGTTCGCC ACGTTGGCGA CTTTTGCCGT GTTCTGCGCC TTTCCGTTCT ACTGGATGCT GATCACCACG TTCAAGGATG TGCACGACCT GATCAACACG GCCAACAATC CGTTCGTGTT CAATCTGCCA CCCACGACGG AGAACCTGCG GGTGCTGTTC CAGGAAACCG CATTCCTGCG ATGGCTGCTC AACACGCTGC TGGTGGGCGT TTTCGTGGTC ATCATCACGC TCGTGCTCGC GGTACCGGCG GGCTACAGCC TGGCGCGACT ATCGGGACCC CGAGGGCGGC AACTCGCCAT CGCCATCTTC CTGACTTATC TGATTCCGCC CACGATCCTG TTCATTCCGT TCTCCCGCAT CGTCGGCGCG CTGGGCCTGC AGGACTCGCT CTGGTCGCTC GTGCTCGTGT ACCCGAGCTT TACCGTGCCG TTCTGCACCT GGCTGATGAT GGGCTTCTTC AAGGCGGTGC CCCGGGACAT CGAGGAAGCC GCGATGATGG ATGGCATGAG CCGCTTTGGC GCGTTCCTGA AAGTCATCGT GCCGCTATCG TCAGCGGGCA TTCTCACCGT GATCATCTTC ACGCTGACGC TGGTGATGCA GGAGTTCGTC TACGCGCTGA CGTTCATCAC GAGTTCCTCG CAGTACACGG TCAGCGTGGG CGTGCCCACT TTCCTTGTGC GCGGCGACGT CTATTTCTGG GGCTCGCTGA TGGGTGCATG CCTGATCGTC AGCGTGCCGG TAGCGCTGCT GTACAACGTG TTCCTCGATC GCTTTGTCAC CGCTTTCACC GTGGGCGCGA TAAAGTAG
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Protein sequence | MEAISTSGGW KLAWLGSRWP ARCAWVAVFA TLATFAVFCA FPFYWMLITT FKDVHDLINT ANNPFVFNLP PTTENLRVLF QETAFLRWLL NTLLVGVFVV IITLVLAVPA GYSLARLSGP RGRQLAIAIF LTYLIPPTIL FIPFSRIVGA LGLQDSLWSL VLVYPSFTVP FCTWLMMGFF KAVPRDIEEA AMMDGMSRFG AFLKVIVPLS SAGILTVIIF TLTLVMQEFV YALTFITSSS QYTVSVGVPT FLVRGDVYFW GSLMGACLIV SVPVALLYNV FLDRFVTAFT VGAIK
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