Gene EcHS_A1427 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A1427 
Symbol 
ID5592083 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp1421540 
End bp1422382 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content53% 
IMG OID640920582 
Productputative sugar ABC transporter, permease protein 
Protein accessionYP_001458141 
Protein GI157160823 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones62 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAACAA ATAAACGCAC ACTCAGTCGC ATCGGTTTTT ACTGCGGGCT GGCGCTGTTT 
CTCATCATCA CGCTGTTTCC ATTTTTTGTG ATGCTGATGA CCTCGTTCAA GGGCGCGAAA
GAGGCGATCT CACTGCATCC TACGCTGCTG CCGCAGCAGT GGACGCTGGA GCATTACGTC
GACATTTTTA ACCCGATGAT TTTCCCGTTT GTCGACTACT TCCGTAACAG TCTGGTGGTG
TCTGTGGTTT CATCCGTGGT GGCGGTATTC CTCGGCATTC TTGGGGCTTA CGCGCTTTCC
CGCCTGCGCT TTAAAGGTCG GATGACCATC AACGCCAGCT TTTACACGGT GTATATGTTC
TCTGGCATTT TGCTGGTGGT GCCGCTTTTC AAAATCATCA CCGCGCTTGG CATTTACGAC
ACTGAGATGG CGCTGATCAT CACCATGGTG ACGCAAACTC TGCCCACCGC CGTGTTTATG
CTGAAAAGCT ACTTCGACAC CATCCCCGAT GAGATCGAAG AAGCGGCGAT GATGGATGGC
CTCAACCGTC TGCAAATTAT CTTCCGCATC ACCGTGCCGT TGGCGATGTC CGGGCTGATA
TCCGTGTTCG TCTACTGCTT TATGGTGGCG TGGAACGACT ATCTGTTTGC GTCGATTTTC
CTCTCCAGCG CCAGCAATTT CACCTTACCG GTGGGCCTGA ACGCGCTGTT CAGTACGCCA
GATTACATCT GGGGACGGAT GATGGCGGCC TCACTGGTGA CCGCATTGCC GGTGGTGATT
ATGTATGCGC TTTCGGAACG TTTTATTAAG AGTGGTTTGA CCGCCGGTGG CGTGAAGGGC
TAA
 
Protein sequence
MATNKRTLSR IGFYCGLALF LIITLFPFFV MLMTSFKGAK EAISLHPTLL PQQWTLEHYV 
DIFNPMIFPF VDYFRNSLVV SVVSSVVAVF LGILGAYALS RLRFKGRMTI NASFYTVYMF
SGILLVVPLF KIITALGIYD TEMALIITMV TQTLPTAVFM LKSYFDTIPD EIEEAAMMDG
LNRLQIIFRI TVPLAMSGLI SVFVYCFMVA WNDYLFASIF LSSASNFTLP VGLNALFSTP
DYIWGRMMAA SLVTALPVVI MYALSERFIK SGLTAGGVKG