| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_2313 |
|---|
| Symbol | |
|---|
| ID | 6066886 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli ATCC 8739 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010468 |
|---|
| Strand | - |
|---|
| Start bp | 2551699 |
|---|
| End bp | 2552541 |
|---|
| Gene Length | 843 bp |
|---|
| Protein Length | 280 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 641601716 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_001725275 |
|---|
| Protein GI | 170020321 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0395] ABC-type sugar transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.676844 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAACAA ATAAACGCAC ACTCAGTCGC ATCGGTTTTT ACTGCGGGCT GGCGCTGTTT
CTCATCATCA CGCTGTTTCC ATTTTTTGTG ATGCTGATGA CCTCGTTCAA GGGCGCGAAA
GAGGCGATCT CACTGCATCC TACGCTGCTG CCGCAGCAGT GGACGCTGGA GCATTACGTC
GACATTTTTA ACCCGATGAT TTTCCCGTTT GTCGACTACT TCCGTAACAG TCTGGTGGTG
TCTGTGGTTT CATCCGTGGT GGCGGTATTC CTCGGCATTC TTGGGGCTTA CGCGCTTTCC
CGCCTGCGCT TTAAAGGTCG GATGACCATC AACGCCAGCT TTTACACGGT GTATATGTTC
TCTGGCATTT TGCTGGTGGT GCCGCTTTTC AAAATCATCA CCGCGCTTGG CATTTACGAC
ACTGAGATGG CGCTGATCAT CACCATGGTG ACGCAAACTC TGCCCACCGC CGTGTTTATG
CTGAAAAGCT ACTTCGACAC CATCCCCGAT GAGATCGAAG AAGCGGCGAT GATGGATGGC
CTCAACCGTC TGCAAATTAT CTTCCGCATC ACCGTGCCGT TGGCGATGTC CGGGCTGATA
TCCGTGTTCG TCTACTGCTT TATGGTGGCG TGGAACGACT ATCTGTTTGC GTCGATTTTC
CTCTCCAGCG CCAGCAATTT CACCTTACCG GTGGGCCTGA ACGCGCTGTT CAGTACGCCA
GATTACATCT GGGGACGGAT GATGGCGGCC TCACTGGTGA CCGCATTGCC GGTGGTGATT
ATGTATGCGC TTTCGGAACG TTTTATTAAG AGTGGTTTGA CCGCCGGTGG CGTGAAGGGC
TAA
|
|---|
| Protein sequence | MATNKRTLSR IGFYCGLALF LIITLFPFFV MLMTSFKGAK EAISLHPTLL PQQWTLEHYV
DIFNPMIFPF VDYFRNSLVV SVVSSVVAVF LGILGAYALS RLRFKGRMTI NASFYTVYMF
SGILLVVPLF KIITALGIYD TEMALIITMV TQTLPTAVFM LKSYFDTIPD EIEEAAMMDG
LNRLQIIFRI TVPLAMSGLI SVFVYCFMVA WNDYLFASIF LSSASNFTLP VGLNALFSTP
DYIWGRMMAA SLVTALPVVI MYALSERFIK SGLTAGGVKG
|
|---|
| |