More than 300 homologs were found in PanDaTox collection
for query gene Sked_05490 on replicon NC_013521
Organism: Sanguibacter keddieii DSM 10542



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013521  Sked_05490  methyl-accepting chemotaxis protein  100 
 
 
314 aa  593  1e-168  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_2232  methyl-accepting chemotaxis sensory transducer  36.36 
 
 
307 aa  171  2e-41  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.383652 
 
 
-
 
NC_009664  Krad_3404  methyl-accepting chemotaxis sensory transducer  37.74 
 
 
317 aa  157  2e-37  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.507139  normal  0.337422 
 
 
-
 
NC_007778  RPB_1072  methyl-accepting chemotaxis sensory transducer  31.15 
 
 
411 aa  111  2.0000000000000002e-23  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_010730  SYO3AOP1_0921  methyl-accepting chemotaxis sensory transducer  29.77 
 
 
483 aa  110  3e-23  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  n/a   
 
 
-
 
NC_012039  Cla_0962  MCP-domain signal transduction protein  28.4 
 
 
458 aa  108  1e-22  Campylobacter lari RM2100  Bacteria  normal  n/a   
 
 
-
 
NC_007575  Suden_0043  methyl-accepting chemotaxis sensory transducer  31.34 
 
 
421 aa  105  1e-21  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_1394  chemotaxis sensory transducer  32.4 
 
 
444 aa  103  5e-21  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_013512  Sdel_0157  chemotaxis sensory transducer  29.84 
 
 
447 aa  102  1e-20  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  0.0930636  n/a   
 
 
-
 
NC_007925  RPC_4661  methyl-accepting chemotaxis sensory transducer  32.43 
 
 
440 aa  100  4e-20  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.224598 
 
 
-
 
NC_011004  Rpal_4791  methyl-accepting chemotaxis sensory transducer  32.06 
 
 
434 aa  100  4e-20  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009707  JJD26997_0539  methyl-accepting chemotaxis protein  26.28 
 
 
459 aa  99  9e-20  Campylobacter jejuni subsp. doylei 269.97  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_1313  methyl-accepting chemotaxis sensory transducer  30.03 
 
 
434 aa  99  1e-19  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.204182 
 
 
-
 
NC_003912  CJE1324  methyl-accepting chemotaxis protein  26.52 
 
 
459 aa  97.4  2e-19  Campylobacter jejuni RM1221  Bacteria  normal  n/a   
 
 
-
 
NC_008787  CJJ81176_1205  methyl-accepting chemotaxis protein  26.52 
 
 
459 aa  97.8  2e-19  Campylobacter jejuni subsp. jejuni 81-176  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_1414  methyl-accepting chemotaxis sensory transducer  32.03 
 
 
440 aa  96.3  6e-19  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.0801097  normal 
 
 
-
 
NC_009802  CCC13826_1234  methyl-accepting chemotaxis protein  30.59 
 
 
418 aa  96.3  7e-19  Campylobacter concisus 13826  Bacteria  normal  n/a   
 
 
-
 
NC_007575  Suden_0981  methyl-accepting chemotaxis sensory transducer  25.93 
 
 
635 aa  95.1  1e-18  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  0.779847  n/a   
 
 
-
 
NC_011004  Rpal_4682  methyl-accepting chemotaxis sensory transducer  31.21 
 
 
441 aa  95.1  1e-18  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A3465  methyl-accepting chemotaxis sensory transducer  29.62 
 
 
419 aa  95.1  1e-18  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.61828  n/a   
 
 
-
 
NC_011004  Rpal_4974  methyl-accepting chemotaxis sensory transducer  33.45 
 
 
440 aa  94.7  2e-18  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.178259  n/a   
 
 
-
 
NC_009715  CCV52592_1961  putative DNA-binding response regulator  29.11 
 
 
421 aa  94  3e-18  Campylobacter curvus 525.92  Bacteria  normal  n/a   
 
 
-
 
NC_014148  Plim_1909  chemotaxis sensory transducer  43.57 
 
 
965 aa  93.6  4e-18  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.11776  n/a   
 
 
-
 
NC_011004  Rpal_4976  methyl-accepting chemotaxis sensory transducer  31.62 
 
 
440 aa  92.8  6e-18  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.350417  n/a   
 
 
-
 
NC_008009  Acid345_1526  methyl-accepting chemotaxis sensory transducer  39.1 
 
 
858 aa  93.2  6e-18  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.787952  normal  0.35844 
 
 
-
 
NC_009664  Krad_1930  methyl-accepting chemotaxis sensory transducer  56.12 
 
 
517 aa  91.3  2e-17  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0153757  normal 
 
 
-
 
NC_011769  DvMF_0948  methyl-accepting chemotaxis sensory transducer  50.93 
 
 
587 aa  90.5  3e-17  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.352371 
 
 
-
 
NC_008787  CJJ81176_0473  methyl-accepting chemotaxis protein  37.86 
 
 
365 aa  89.7  5e-17  Campylobacter jejuni subsp. jejuni 81-176  Bacteria  normal  0.614165  n/a   
 
 
-
 
NC_007298  Daro_2834  histidine kinase, HAMP region: chemotaxis sensory transducer  45.24 
 
 
671 aa  89.4  8e-17  Dechloromonas aromatica RCB  Bacteria  normal  0.188903  normal 
 
 
-
 
NC_007643  Rru_A0568  chemotaxis sensory transducer  50 
 
 
662 aa  89.4  8e-17  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_2843  putative histidine kinase, HAMP region  36.72 
 
 
682 aa  89  9e-17  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007604  Synpcc7942_0858  methyl-accepting chemotaxis sensory transducer with phytochrome sensor  40 
 
 
1406 aa  89  9e-17  Synechococcus elongatus PCC 7942  Bacteria  normal  0.0185965  normal  0.079214 
 
 
-
 
NC_013174  Jden_1995  methyl-accepting chemotaxis sensory transducer  40.25 
 
 
394 aa  88.6  1e-16  Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_05860  methyl-accepting chemotaxis protein  40.7 
 
 
517 aa  88.6  1e-16  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A3665  chemotaxis sensory transducer  44.63 
 
 
567 aa  88.2  1e-16  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_1672  methyl-accepting chemotaxis sensory transducer  44.26 
 
 
904 aa  88.6  1e-16  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.707022 
 
 
-
 
NC_011769  DvMF_1869  methyl-accepting chemotaxis sensory transducer with Cache sensor  43.85 
 
 
607 aa  88.6  1e-16  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_003912  CJE0498  methyl-accepting chemotaxis protein  37.14 
 
 
365 aa  88.2  2e-16  Campylobacter jejuni RM1221  Bacteria  normal  0.654005  n/a   
 
 
-
 
NC_013512  Sdel_0367  chemotaxis sensory transducer  26.23 
 
 
483 aa  87.8  2e-16  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  0.124323  n/a   
 
 
-
 
NC_010003  Pmob_0837  methyl-accepting chemotaxis sensory transducer  32.73 
 
 
667 aa  87.8  2e-16  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_2084  methyl-accepting chemotaxis sensory transducer  30.23 
 
 
597 aa  88.2  2e-16  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_1624  methyl-accepting chemotaxis sensory transducer  39.61 
 
 
626 aa  87.4  3e-16  Rhodothermus marinus DSM 4252  Bacteria  normal  0.835429  n/a   
 
 
-
 
NC_010003  Pmob_0137  methyl-accepting chemotaxis sensory transducer  38.21 
 
 
748 aa  87.4  3e-16  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_3293  methyl-accepting chemotaxis sensory transducer  37.57 
 
 
720 aa  87.4  3e-16  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.601  n/a   
 
 
-
 
NC_011898  Ccel_3234  methyl-accepting chemotaxis sensory transducer  36.88 
 
 
678 aa  87  3e-16  Clostridium cellulolyticum H10  Bacteria  normal  0.0897525  n/a   
 
 
-
 
NC_007643  Rru_A2078  chemotaxis sensory transducer  38.41 
 
 
561 aa  87.4  3e-16  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.960991  n/a   
 
 
-
 
NC_012039  Cla_1032  MCP-domain signal transduction protein  43.09 
 
 
375 aa  87.4  3e-16  Campylobacter lari RM2100  Bacteria  normal  0.60166  n/a   
 
 
-
 
NC_013521  Sked_05890  methyl-accepting chemotaxis protein  47.15 
 
 
538 aa  87.4  3e-16  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.383381 
 
 
-
 
NC_010718  Nther_2186  methyl-accepting chemotaxis sensory transducer  30.98 
 
 
576 aa  86.7  4e-16  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  hitchhiker  0.00886832 
 
 
-
 
NC_010003  Pmob_0509  methyl-accepting chemotaxis sensory transducer  38.21 
 
 
666 aa  86.7  4e-16  Petrotoga mobilis SJ95  Bacteria  hitchhiker  0.0000844427  n/a   
 
 
-
 
NC_010003  Pmob_0496  methyl-accepting chemotaxis sensory transducer  32.96 
 
 
670 aa  87  4e-16  Petrotoga mobilis SJ95  Bacteria  normal  0.474098  n/a   
 
 
-
 
NC_008599  CFF8240_1223  methyl-accepting chemotaxis protein  27.59 
 
 
381 aa  87  4e-16  Campylobacter fetus subsp. fetus 82-40  Bacteria  normal  n/a   
 
 
-
 
NC_010003  Pmob_0228  methyl-accepting chemotaxis sensory transducer  35.1 
 
 
667 aa  86.7  5e-16  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_2585  methyl-accepting chemotaxis sensory transducer  39.76 
 
 
552 aa  86.7  5e-16  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_1425  methyl-accepting chemotaxis sensory transducer  46.67 
 
 
787 aa  86.7  5e-16  Cyanothece sp. PCC 7425  Bacteria  normal  0.68627  normal  0.569737 
 
 
-
 
NC_011884  Cyan7425_3745  methyl-accepting chemotaxis sensory transducer  59.46 
 
 
852 aa  86.7  5e-16  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_6993  putative methyl-accepting chemotaxis receptor/sensory transducer  35.76 
 
 
697 aa  86.3  6e-16  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A2076  chemotaxis sensory transducer  37.68 
 
 
561 aa  86.3  6e-16  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.723039  n/a   
 
 
-
 
NC_011898  Ccel_2874  methyl-accepting chemotaxis sensory transducer  33.5 
 
 
771 aa  86.3  6e-16  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_1025  methyl-accepting chemotaxis sensory transducer  40.31 
 
 
681 aa  86.3  6e-16  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_009802  CCC13826_1521  methyl-accepting chemotaxis protein  37.97 
 
 
360 aa  85.9  8e-16  Campylobacter concisus 13826  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_0752  methyl-accepting chemotaxis sensory transducer  38.36 
 
 
716 aa  85.9  9e-16  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.713683  normal 
 
 
-
 
NC_010172  Mext_0809  chemotaxis sensory transducer  38.36 
 
 
717 aa  85.5  9e-16  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_013502  Rmar_2870  methyl-accepting chemotaxis sensory transducer  39.73 
 
 
636 aa  85.5  9e-16  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU0400  methyl-accepting chemotaxis protein  44.44 
 
 
549 aa  85.1  0.000000000000001  Geobacter sulfurreducens PCA  Bacteria  normal  0.431065  n/a   
 
 
-
 
NC_009485  BBta_4269  putative methyl-accepting chemotaxis receptor/sensory transducer protein  39.29 
 
 
691 aa  85.1  0.000000000000001  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.35374 
 
 
-
 
NC_009616  Tmel_1776  methyl-accepting chemotaxis sensory transducer  40.27 
 
 
664 aa  85.5  0.000000000000001  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A2484  chemotaxis sensory transducer  56.47 
 
 
563 aa  85.1  0.000000000000001  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.1562  n/a   
 
 
-
 
NC_009616  Tmel_1120  methyl-accepting chemotaxis sensory transducer  40.27 
 
 
664 aa  85.5  0.000000000000001  Thermosipho melanesiensis BI429  Bacteria  hitchhiker  0.00177625  n/a   
 
 
-
 
NC_009483  Gura_2845  methyl-accepting chemotaxis sensory transducer  44.44 
 
 
549 aa  85.1  0.000000000000001  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.000000597879  n/a   
 
 
-
 
NC_010003  Pmob_1607  methyl-accepting chemotaxis sensory transducer  38.21 
 
 
668 aa  85.5  0.000000000000001  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_0840  chemotaxis sensory transducer  36.72 
 
 
712 aa  85.5  0.000000000000001  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.174635 
 
 
-
 
NC_007958  RPD_0994  chemotaxis sensory transducer  38.73 
 
 
656 aa  85.1  0.000000000000001  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.357708  normal 
 
 
-
 
NC_008578  Acel_1751  methyl-accepting chemotaxis sensory transducer  41.84 
 
 
547 aa  85.1  0.000000000000001  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_008607  Ppro_3805  methyl-accepting chemotaxis sensory transducer  48.51 
 
 
422 aa  85.1  0.000000000000001  Pelobacter propionicus DSM 2379  Bacteria  hitchhiker  0.000721713  n/a   
 
 
-
 
NC_011004  Rpal_5144  methyl-accepting chemotaxis sensory transducer  38.35 
 
 
686 aa  85.5  0.000000000000001  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_1974  chemotaxis sensory transducer  46.43 
 
 
535 aa  85.1  0.000000000000001  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013922  Nmag_2639  methyl-accepting chemotaxis sensory transducer  34.34 
 
 
864 aa  84.3  0.000000000000002  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_007517  Gmet_0712  methyl-accepting chemotaxis sensory transducer  45.76 
 
 
550 aa  84.7  0.000000000000002  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_011769  DvMF_0303  methyl-accepting chemotaxis sensory transducer  51.58 
 
 
591 aa  84.3  0.000000000000002  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.319647 
 
 
-
 
NC_009654  Mmwyl1_0686  methyl-accepting chemotaxis sensory transducer  39.01 
 
 
551 aa  84.3  0.000000000000002  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A1293  methyl-accepting chemotaxis sensory transducer  50.52 
 
 
562 aa  84.3  0.000000000000002  Rhodospirillum rubrum ATCC 11170  Bacteria  decreased coverage  0.00511002  n/a   
 
 
-
 
NC_007778  RPB_0914  methyl-accepting chemotaxis sensory transducer  42.64 
 
 
689 aa  84.7  0.000000000000002  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.497103 
 
 
-
 
NC_011138  MADE_03785  methyl-accepting chemotaxis protein  30.9 
 
 
360 aa  84.7  0.000000000000002  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_4286  methyl-accepting chemotaxis sensory transducer  39.29 
 
 
563 aa  84.7  0.000000000000002  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_4561  methyl-accepting chemotaxis sensory transducer  46.43 
 
 
711 aa  84.7  0.000000000000002  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_009524  PsycPRwf_2156  methyl-accepting chemotaxis sensory transducer  50.62 
 
 
575 aa  85.1  0.000000000000002  Psychrobacter sp. PRwf-1  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_4118  methyl-accepting chemotaxis sensory transducer  34.81 
 
 
567 aa  84.7  0.000000000000002  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_5010  methyl-accepting chemotaxis sensory transducer  43.55 
 
 
538 aa  84.7  0.000000000000002  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_0109  methyl-accepting chemotaxis sensory transducer  42.86 
 
 
528 aa  84.3  0.000000000000002  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.268294  n/a   
 
 
-
 
NC_012918  GM21_3453  methyl-accepting chemotaxis sensory transducer  47.06 
 
 
532 aa  84.7  0.000000000000002  Geobacter sp. M21  Bacteria  n/a    normal  0.0235494 
 
 
-
 
NC_012918  GM21_3709  methyl-accepting chemotaxis sensory transducer with Cache sensor  48 
 
 
546 aa  84.3  0.000000000000002  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_007204  Psyc_1815  putative chemotaxis sensory transducer  57.53 
 
 
475 aa  84.3  0.000000000000003  Psychrobacter arcticus 273-4  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_3958  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  38.98 
 
 
433 aa  84  0.000000000000003  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_012793  GWCH70_3316  methyl-accepting chemotaxis sensory transducer  39.19 
 
 
431 aa  84.3  0.000000000000003  Geobacillus sp. WCH70  Bacteria  normal  0.613067  n/a   
 
 
-
 
NC_013757  Gobs_5009  methyl-accepting chemotaxis sensory transducer  44.35 
 
 
537 aa  84  0.000000000000003  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_6950  putative methyl-accepting chemotaxis receptor/sensory transducer  35.29 
 
 
661 aa  84  0.000000000000003  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_2154  methyl-accepting chemotaxis sensory transducer  37.25 
 
 
572 aa  84  0.000000000000003  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_2907  putative methyl-accepting chemotaxis protein  40 
 
 
556 aa  84  0.000000000000003  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.835875  normal  0.0729634 
 
 
-
 
NC_013093  Amir_4184  methyl-accepting chemotaxis sensory transducer  37.7 
 
 
536 aa  84  0.000000000000003  Actinosynnema mirum DSM 43827  Bacteria  normal  0.483396  n/a   
 
 
-
 
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