More than 300 homologs were found in PanDaTox collection
for query gene Sked_05860 on replicon NC_013521
Organism: Sanguibacter keddieii DSM 10542



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013521  Sked_05860  methyl-accepting chemotaxis protein  100 
 
 
517 aa  1002    Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_1930  methyl-accepting chemotaxis sensory transducer  64.66 
 
 
517 aa  613  9.999999999999999e-175  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0153757  normal 
 
 
-
 
NC_013093  Amir_0376  methyl-accepting chemotaxis sensory transducer with GAF sensor  63.71 
 
 
520 aa  605  9.999999999999999e-173  Actinosynnema mirum DSM 43827  Bacteria  normal  0.984009  n/a   
 
 
-
 
NC_013093  Amir_2745  methyl-accepting chemotaxis sensory transducer with GAF sensor  62.33 
 
 
522 aa  572  1.0000000000000001e-162  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_4465  methyl-accepting chemotaxis sensory transducer  60.04 
 
 
532 aa  570  1e-161  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.857744  normal  0.045525 
 
 
-
 
NC_013174  Jden_2472  methyl-accepting chemotaxis sensory transducer with GAF sensor  50.51 
 
 
519 aa  431  1e-119  Jonesia denitrificans DSM 20603  Bacteria  normal  0.0704852  normal  0.0411737 
 
 
-
 
NC_014148  Plim_1909  chemotaxis sensory transducer  50.58 
 
 
965 aa  351  2e-95  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.11776  n/a   
 
 
-
 
NC_009664  Krad_4261  methyl-accepting chemotaxis sensory transducer  43.17 
 
 
525 aa  293  6e-78  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.545392  normal  0.505117 
 
 
-
 
NC_013757  Gobs_3394  methyl-accepting chemotaxis sensory transducer with GAF sensor  45.5 
 
 
516 aa  281  2e-74  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_008578  Acel_1751  methyl-accepting chemotaxis sensory transducer  55.41 
 
 
547 aa  139  8.999999999999999e-32  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_2984  chemotaxis sensory transducer  51.7 
 
 
545 aa  138  3.0000000000000003e-31  Nocardioides sp. JS614  Bacteria  normal  0.660626  n/a   
 
 
-
 
NC_013093  Amir_2323  methyl-accepting chemotaxis sensory transducer  50.68 
 
 
545 aa  130  6e-29  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_1672  methyl-accepting chemotaxis sensory transducer  47.33 
 
 
904 aa  130  6e-29  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.707022 
 
 
-
 
NC_008009  Acid345_1526  methyl-accepting chemotaxis sensory transducer  48.67 
 
 
858 aa  129  1.0000000000000001e-28  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.787952  normal  0.35844 
 
 
-
 
NC_013174  Jden_0673  methyl-accepting chemotaxis sensory transducer with Cache sensor  47.65 
 
 
533 aa  129  2.0000000000000002e-28  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.349323 
 
 
-
 
NC_013174  Jden_0359  methyl-accepting chemotaxis sensory transducer  43.65 
 
 
542 aa  128  3e-28  Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_1293  chemotaxis sensory transducer  49.4 
 
 
542 aa  127  4.0000000000000003e-28  Nocardioides sp. JS614  Bacteria  normal  0.320257  n/a   
 
 
-
 
NC_013093  Amir_0199  methyl-accepting chemotaxis sensory transducer  48.63 
 
 
532 aa  127  4.0000000000000003e-28  Actinosynnema mirum DSM 43827  Bacteria  normal  0.570256  n/a   
 
 
-
 
NC_013521  Sked_06110  methyl-accepting chemotaxis protein  49.66 
 
 
533 aa  127  5e-28  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.232988  normal 
 
 
-
 
NC_007406  Nwi_2996  methyl-accepting chemotaxis protein  47.37 
 
 
698 aa  126  1e-27  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_0109  methyl-accepting chemotaxis sensory transducer  51.37 
 
 
528 aa  126  1e-27  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.268294  n/a   
 
 
-
 
NC_007958  RPD_3904  chemotaxis sensory transducer  46.71 
 
 
566 aa  126  1e-27  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_4077  methyl-accepting chemotaxis sensory transducer  52.45 
 
 
545 aa  125  2e-27  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_008312  Tery_4229  methyl-accepting chemotaxis sensory transducer  48.99 
 
 
1150 aa  125  2e-27  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.591053 
 
 
-
 
NC_007778  RPB_1321  methyl-accepting chemotaxis sensory transducer  43.96 
 
 
730 aa  125  2e-27  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.0177086  normal  0.260794 
 
 
-
 
NC_008699  Noca_1974  chemotaxis sensory transducer  45.73 
 
 
535 aa  125  2e-27  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_3602  chemotaxis sensory transducer  44.06 
 
 
518 aa  125  3e-27  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_2843  putative histidine kinase, HAMP region  44.08 
 
 
682 aa  124  4e-27  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_1613  methyl-accepting chemotaxis sensory transducer  50.99 
 
 
523 aa  124  5e-27  Kineococcus radiotolerans SRS30216  Bacteria  decreased coverage  0.00385179  normal 
 
 
-
 
NC_011004  Rpal_5172  methyl-accepting chemotaxis sensory transducer  46.05 
 
 
656 aa  124  5e-27  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_5010  methyl-accepting chemotaxis sensory transducer  52.45 
 
 
538 aa  123  6e-27  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_0192  methyl-accepting chemotaxis sensory transducer  46.05 
 
 
688 aa  123  7e-27  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_2653  methyl-accepting chemotaxis sensory transducer  46.05 
 
 
691 aa  123  7e-27  Rhodopseudomonas palustris HaA2  Bacteria  decreased coverage  0.00184965  normal  0.0777916 
 
 
-
 
NC_013757  Gobs_5009  methyl-accepting chemotaxis sensory transducer  49.7 
 
 
537 aa  123  8e-27  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_1918  chemotaxis sensory transducer  46.05 
 
 
688 aa  123  9e-27  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.537222 
 
 
-
 
NC_009485  BBta_3951  hypothetical protein  44.74 
 
 
420 aa  123  9e-27  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.131979  normal  0.604734 
 
 
-
 
NC_009485  BBta_0885  putative methyl-accepting chemotaxis protein  46.05 
 
 
691 aa  122  9.999999999999999e-27  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.493714  normal 
 
 
-
 
NC_007778  RPB_3610  methyl-accepting chemotaxis sensory transducer  44.74 
 
 
563 aa  122  9.999999999999999e-27  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.735593  normal  0.400148 
 
 
-
 
NC_007958  RPD_0153  chemotaxis sensory transducer  48.03 
 
 
602 aa  123  9.999999999999999e-27  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_3107  chemotaxis sensory transducer  47.37 
 
 
674 aa  122  9.999999999999999e-27  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.0664997 
 
 
-
 
NC_007964  Nham_1080  methyl-accepting chemotaxis sensory transducer  48.03 
 
 
698 aa  122  9.999999999999999e-27  Nitrobacter hamburgensis X14  Bacteria  normal  0.0139762  n/a   
 
 
-
 
NC_013521  Sked_32360  methyl-accepting chemotaxis protein  50.65 
 
 
530 aa  122  1.9999999999999998e-26  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_2358  methyl-accepting chemotaxis sensory transducer  47.37 
 
 
673 aa  122  1.9999999999999998e-26  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.207811 
 
 
-
 
NC_007778  RPB_4286  methyl-accepting chemotaxis sensory transducer  41.58 
 
 
563 aa  122  1.9999999999999998e-26  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_32370  methyl-accepting chemotaxis protein  50.99 
 
 
531 aa  122  1.9999999999999998e-26  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_0065  chemotaxis sensory transducer  45.39 
 
 
688 aa  122  1.9999999999999998e-26  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.0714339 
 
 
-
 
NC_013521  Sked_30970  methyl-accepting chemotaxis protein  47.62 
 
 
562 aa  121  3e-26  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_0198  methyl-accepting chemotaxis sensory transducer  48.63 
 
 
715 aa  121  3e-26  Actinosynnema mirum DSM 43827  Bacteria  normal  0.419669  n/a   
 
 
-
 
NC_007643  Rru_A2546  chemotaxis sensory transducer  47.37 
 
 
690 aa  121  3e-26  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_0969  methyl-accepting chemotaxis sensory transducer  46.71 
 
 
562 aa  121  3e-26  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.956339  normal  0.570918 
 
 
-
 
NC_009664  Krad_0651  methyl-accepting chemotaxis sensory transducer  50.34 
 
 
535 aa  121  3e-26  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.406234  normal  0.0260089 
 
 
-
 
NC_009485  BBta_2905  putative methyl-accepting chemotaxis protein  46.71 
 
 
542 aa  120  3.9999999999999996e-26  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.234112  normal  0.211145 
 
 
-
 
NC_013093  Amir_1755  methyl-accepting chemotaxis sensory transducer  51.61 
 
 
538 aa  120  4.9999999999999996e-26  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_4269  putative methyl-accepting chemotaxis receptor/sensory transducer protein  46.05 
 
 
691 aa  120  4.9999999999999996e-26  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.35374 
 
 
-
 
NC_013174  Jden_0421  methyl-accepting chemotaxis sensory transducer  47.93 
 
 
623 aa  120  4.9999999999999996e-26  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.308823 
 
 
-
 
NC_011004  Rpal_2757  methyl-accepting chemotaxis sensory transducer  42.11 
 
 
561 aa  120  4.9999999999999996e-26  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0630329  n/a   
 
 
-
 
NC_009664  Krad_4271  methyl-accepting chemotaxis sensory transducer  46.71 
 
 
535 aa  120  4.9999999999999996e-26  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.79817  normal  0.653673 
 
 
-
 
NC_011004  Rpal_2025  methyl-accepting chemotaxis sensory transducer  44.74 
 
 
688 aa  120  6e-26  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0110809  n/a   
 
 
-
 
NC_013093  Amir_0375  methyl-accepting chemotaxis sensory transducer  60.71 
 
 
544 aa  120  6e-26  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_1857  chemotaxis sensory transducer  46.71 
 
 
563 aa  120  6e-26  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A2757  chemotaxis sensory transducer  46.05 
 
 
591 aa  120  7e-26  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_0924  methyl-accepting chemotaxis sensory transducer  45.64 
 
 
712 aa  120  7.999999999999999e-26  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.991242  n/a   
 
 
-
 
NC_007778  RPB_0914  methyl-accepting chemotaxis sensory transducer  45.39 
 
 
689 aa  120  7.999999999999999e-26  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.497103 
 
 
-
 
NC_013521  Sked_30940  methyl-accepting chemotaxis protein  48.95 
 
 
407 aa  119  9e-26  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.682285  normal 
 
 
-
 
NC_013757  Gobs_5008  methyl-accepting chemotaxis sensory transducer  48.5 
 
 
546 aa  119  9.999999999999999e-26  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_4464  methyl-accepting chemotaxis sensory transducer  46.31 
 
 
573 aa  119  9.999999999999999e-26  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.610641  normal  0.757777 
 
 
-
 
NC_013521  Sked_30960  methyl-accepting chemotaxis protein  49.3 
 
 
540 aa  119  9.999999999999999e-26  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_1871  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  45.39 
 
 
716 aa  119  9.999999999999999e-26  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_2901  methyl-accepting chemotaxis sensory transducer  45.39 
 
 
674 aa  119  9.999999999999999e-26  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.14772  normal  0.22504 
 
 
-
 
NC_009485  BBta_5110  hypothetical protein  44.08 
 
 
688 aa  119  9.999999999999999e-26  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.791751 
 
 
-
 
NC_011004  Rpal_4791  methyl-accepting chemotaxis sensory transducer  43.87 
 
 
434 aa  119  9.999999999999999e-26  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A0120  chemotaxis sensory transducer  47.37 
 
 
445 aa  119  1.9999999999999998e-25  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.118781  n/a   
 
 
-
 
NC_011004  Rpal_1830  methyl-accepting chemotaxis sensory transducer  46.05 
 
 
563 aa  118  1.9999999999999998e-25  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_5119  methyl-accepting chemotaxis sensory transducer  46.71 
 
 
563 aa  118  1.9999999999999998e-25  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_0635  methyl-accepting chemotaxis sensory transducer  51.32 
 
 
665 aa  118  1.9999999999999998e-25  Methylobacterium sp. 4-46  Bacteria  normal  0.540512  normal  0.0205008 
 
 
-
 
NC_009664  Krad_2095  methyl-accepting chemotaxis sensory transducer  47.74 
 
 
538 aa  118  1.9999999999999998e-25  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_30950  methyl-accepting chemotaxis protein  47.62 
 
 
540 aa  119  1.9999999999999998e-25  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.664181  normal 
 
 
-
 
NC_009485  BBta_6483  methyl-accepting chemotaxis protein  46.05 
 
 
565 aa  119  1.9999999999999998e-25  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.877741  normal 
 
 
-
 
NC_009485  BBta_2904  putative methyl-accepting chemotaxis protein  45.39 
 
 
568 aa  118  1.9999999999999998e-25  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.481458  normal  0.283558 
 
 
-
 
NC_007925  RPC_4809  methyl-accepting chemotaxis sensory transducer  45.39 
 
 
563 aa  118  1.9999999999999998e-25  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_0994  chemotaxis sensory transducer  38.42 
 
 
656 aa  118  1.9999999999999998e-25  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.357708  normal 
 
 
-
 
NC_009485  BBta_2908  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  45.39 
 
 
561 aa  118  3e-25  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.07018 
 
 
-
 
NC_007925  RPC_4406  methyl-accepting chemotaxis sensory transducer  45.39 
 
 
566 aa  118  3e-25  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.341232 
 
 
-
 
NC_013093  Amir_4184  methyl-accepting chemotaxis sensory transducer  49.32 
 
 
536 aa  117  3.9999999999999997e-25  Actinosynnema mirum DSM 43827  Bacteria  normal  0.483396  n/a   
 
 
-
 
NC_007925  RPC_3378  methyl-accepting chemotaxis sensory transducer  45.39 
 
 
563 aa  117  3.9999999999999997e-25  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.104618  normal 
 
 
-
 
NC_007958  RPD_0337  chemotaxis sensory transducer  46.71 
 
 
563 aa  117  3.9999999999999997e-25  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.760858  normal  0.789667 
 
 
-
 
NC_013174  Jden_1995  methyl-accepting chemotaxis sensory transducer  50.7 
 
 
394 aa  117  3.9999999999999997e-25  Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_3547  chemotaxis sensory transducer  45.39 
 
 
566 aa  117  3.9999999999999997e-25  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_1536  methyl-accepting chemotaxis protein  45.39 
 
 
716 aa  117  5e-25  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.566253  normal  0.284447 
 
 
-
 
NC_007925  RPC_4407  methyl-accepting chemotaxis sensory transducer  45.39 
 
 
566 aa  117  5e-25  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.365939 
 
 
-
 
NC_011004  Rpal_3598  methyl-accepting chemotaxis sensory transducer  45.64 
 
 
672 aa  117  5e-25  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_0026  methyl-accepting chemotaxis sensory transducer  45.39 
 
 
686 aa  117  6e-25  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_4449  methyl-accepting chemotaxis sensory transducer  47.34 
 
 
538 aa  117  6e-25  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.018308  normal 
 
 
-
 
NC_007958  RPD_0497  chemotaxis sensory transducer  45.39 
 
 
577 aa  117  6e-25  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_4561  methyl-accepting chemotaxis sensory transducer  44.97 
 
 
711 aa  117  6.9999999999999995e-25  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_3907  chemotaxis sensory transducer  43.42 
 
 
424 aa  117  6.9999999999999995e-25  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.827608 
 
 
-
 
NC_011004  Rpal_4941  methyl-accepting chemotaxis sensory transducer  44.74 
 
 
563 aa  116  7.999999999999999e-25  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.396774  n/a   
 
 
-
 
NC_013521  Sked_07600  methyl-accepting chemotaxis protein  48.37 
 
 
533 aa  116  7.999999999999999e-25  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.0696595 
 
 
-
 
NC_013521  Sked_27420  methyl-accepting chemotaxis protein  48.32 
 
 
540 aa  116  7.999999999999999e-25  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.141989  normal 
 
 
-
 
NC_007925  RPC_3379  methyl-accepting chemotaxis sensory transducer  44.44 
 
 
587 aa  116  7.999999999999999e-25  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.787169  normal 
 
 
-
 
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