202 homologs were found in PanDaTox collection
for query gene SERP2404 on replicon NC_002976
Organism: Staphylococcus epidermidis RP62A



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_002976  SERP2404  iron compound ABC transporter, iron compound-binding protein, putative  100 
 
 
324 aa  668    Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_009487  SaurJH9_0209  ABC-type Fe3+ transport system periplasmic component-like protein  74.69 
 
 
322 aa  486  1e-136  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_009632  SaurJH1_0215  hypothetical protein  74.69 
 
 
322 aa  486  1e-136  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_004116  SAG1945  iron ABC transporter, iron-binding protein  28.43 
 
 
345 aa  142  9.999999999999999e-33  Streptococcus agalactiae 2603V/R  Bacteria  normal  n/a   
 
 
-
 
NC_014150  Bmur_0923  extracellular solute-binding protein family 1  27.36 
 
 
347 aa  139  4.999999999999999e-32  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_1588  extracellular solute-binding protein  27.72 
 
 
368 aa  139  8.999999999999999e-32  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_2139  extracellular solute-binding protein  29.32 
 
 
347 aa  133  3e-30  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_014150  Bmur_0924  extracellular solute-binding protein family 1  26.98 
 
 
334 aa  127  3e-28  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_3891  extracellular solute-binding protein  26.41 
 
 
327 aa  104  2e-21  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_008688  Pden_4911  extracellular solute-binding protein  23.93 
 
 
333 aa  95.5  1e-18  Paracoccus denitrificans PD1222  Bacteria  normal  0.224202  normal  0.316622 
 
 
-
 
NC_010002  Daci_1282  2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component  24.39 
 
 
347 aa  75.9  0.0000000000009  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_013515  Smon_0283  extracellular solute-binding protein family 1  24.2 
 
 
342 aa  72.8  0.000000000007  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_008346  Swol_2476  ABC-type iron(III)-binding periplasmic protein precursor  25 
 
 
364 aa  72  0.00000000001  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  decreased coverage  0.00000339151  n/a   
 
 
-
 
NC_012857  Rpic12D_4607  2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component  24.91 
 
 
341 aa  71.2  0.00000000002  Ralstonia pickettii 12D  Bacteria  normal  0.980284  normal 
 
 
-
 
NC_007348  Reut_B5874  extracellular solute-binding protein  21.86 
 
 
341 aa  71.2  0.00000000002  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010678  Rpic_4473  2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component  24.91 
 
 
341 aa  71.2  0.00000000002  Ralstonia pickettii 12J  Bacteria  normal  normal  0.144148 
 
 
-
 
NC_009436  Ent638_0833  extracellular solute-binding protein  23.2 
 
 
343 aa  70.9  0.00000000003  Enterobacter sp. 638  Bacteria  normal  normal  0.752683 
 
 
-
 
NC_008786  Veis_0970  extracellular solute-binding protein  23.29 
 
 
340 aa  69.3  0.00000000009  Verminephrobacter eiseniae EF01-2  Bacteria  decreased coverage  0.00000273849  normal 
 
 
-
 
NC_011353  ECH74115_0435  extracellular solute-binding protein, family 1  24.74 
 
 
343 aa  68.6  0.0000000001  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_012852  Rleg_6060  extracellular solute-binding protein family 1  21.28 
 
 
340 aa  67.4  0.0000000003  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_003909  BCE_1812  ABC transporter, substrate-binding protein, putative  22.57 
 
 
341 aa  67.4  0.0000000003  Bacillus cereus ATCC 10987  Bacteria  normal  0.98446  n/a   
 
 
-
 
NC_011658  BCAH187_A1866  putative ABC transporter, substrate-binding protein  22.57 
 
 
341 aa  67.4  0.0000000003  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_007348  Reut_B5525  extracellular solute-binding protein  23.6 
 
 
340 aa  67  0.0000000005  Ralstonia eutropha JMP134  Bacteria  normal  0.655164  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1611  extracellular solute-binding protein  23.08 
 
 
341 aa  66.2  0.0000000006  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.257155  n/a   
 
 
-
 
NC_013421  Pecwa_1772  extracellular solute-binding protein family 1  21.84 
 
 
344 aa  66.6  0.0000000006  Pectobacterium wasabiae WPP163  Bacteria  normal  0.320595  n/a   
 
 
-
 
NC_011369  Rleg2_1761  extracellular solute-binding protein family 1  22.44 
 
 
341 aa  66.2  0.0000000008  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.893641  normal  0.0475771 
 
 
-
 
NC_006274  BCZK1563  ABC transporter, substrate-binding protein  22.57 
 
 
341 aa  65.9  0.0000000009  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007510  Bcep18194_A6494  ABC Fe3+ siderophore transporter, periplasmic ligand binding protein  22.14 
 
 
351 aa  65.9  0.0000000009  Burkholderia sp. 383  Bacteria  decreased coverage  0.000128013  normal  0.750448 
 
 
-
 
NC_007492  Pfl01_5367  extracellular solute-binding protein  24.34 
 
 
341 aa  65.1  0.000000002  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_011772  BCG9842_B3590  putative ABC transporter, substrate-binding protein  21.73 
 
 
341 aa  64.3  0.000000002  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_010084  Bmul_3135  2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component  22.47 
 
 
351 aa  65.1  0.000000002  Burkholderia multivorans ATCC 17616  Bacteria  normal  hitchhiker  0.0000124491 
 
 
-
 
NC_010508  Bcenmc03_3159  2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component  22.14 
 
 
351 aa  64.7  0.000000002  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.451295  normal  0.0280644 
 
 
-
 
NC_013172  Bfae_04830  ABC-type Fe3+ transport system, periplasmic component  22.85 
 
 
359 aa  64.3  0.000000003  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A1753  putative ABC transporter, substrate-binding protein  21.54 
 
 
341 aa  63.9  0.000000003  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_1436  iron compound ABC transporter, iron compound-binding protein, putative  22.34 
 
 
346 aa  63.9  0.000000004  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS1235  iron compound ABC transporter iron compound-binding protein  22.34 
 
 
358 aa  63.5  0.000000004  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_1212  iron ABC transporter solute-binding protein  22.34 
 
 
358 aa  63.5  0.000000004  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_1411  putative iron compound ABC transporter, iron compound-binding protein  22.34 
 
 
358 aa  63.5  0.000000004  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_006274  BCZK1214  iron ABC transporter solute-binding protein  22.34 
 
 
358 aa  63.5  0.000000004  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_1337  iron compound ABC transporter iron compound-binding protein  22.34 
 
 
358 aa  63.5  0.000000004  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_008309  HS_0643  Fe3+ ABC transporter, iron-binding protein  23.05 
 
 
346 aa  63.5  0.000000004  Haemophilus somnus 129PT  Bacteria  hitchhiker  0.000121089  n/a   
 
 
-
 
NC_011772  BCG9842_B3970  putative iron compound ABC transporter, iron compound-binding protein  22.57 
 
 
358 aa  63.5  0.000000004  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_5008  extracellular solute-binding protein  23.49 
 
 
341 aa  63.9  0.000000004  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_5135  ABC transporter, periplasmic binding protein  22.85 
 
 
341 aa  63.5  0.000000005  Pseudomonas putida KT2440  Bacteria  normal  0.659918  normal 
 
 
-
 
NC_011658  BCAH187_A1476  putative iron compound ABC transporter, iron compound-binding protein  22.34 
 
 
358 aa  63.5  0.000000005  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_5188  2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component  23.49 
 
 
341 aa  63.2  0.000000006  Pseudomonas putida GB-1  Bacteria  normal  0.491174  normal 
 
 
-
 
NC_012917  PC1_1366  extracellular solute-binding protein family 1  21.96 
 
 
344 aa  63.2  0.000000006  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.755106  n/a   
 
 
-
 
NC_011725  BCB4264_A1374  putative iron compound ABC transporter, iron compound-binding protein  23.05 
 
 
358 aa  63.2  0.000000006  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_4317  extracellular solute-binding protein  23.31 
 
 
343 aa  62.8  0.000000007  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.362014 
 
 
-
 
NC_014212  Mesil_1991  extracellular solute-binding protein family 1  23.33 
 
 
342 aa  62.8  0.000000007  Meiothermus silvanus DSM 9946  Bacteria  decreased coverage  0.000248153  normal 
 
 
-
 
NC_009636  Smed_3281  extracellular solute-binding protein  21.61 
 
 
343 aa  62.8  0.000000007  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_009674  Bcer98_1048  extracellular solute-binding protein  23.03 
 
 
356 aa  62.8  0.000000008  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_4977  extracellular solute-binding protein family 1  22.03 
 
 
347 aa  62  0.00000001  Variovorax paradoxus S110  Bacteria  normal  0.187207  n/a   
 
 
-
 
NC_010501  PputW619_0330  2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component  23.49 
 
 
341 aa  62  0.00000001  Pseudomonas putida W619  Bacteria  normal  normal  0.631264 
 
 
-
 
NC_011773  BCAH820_1786  putative ABC transporter, substrate-binding protein  22.57 
 
 
341 aa  62  0.00000001  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_005957  BT9727_1572  ABC transporter, substrate-binding protein  22.57 
 
 
341 aa  62  0.00000001  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_4694  extracellular solute-binding protein  22.14 
 
 
349 aa  62.4  0.00000001  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_010184  BcerKBAB4_1237  extracellular metal-binding protein  22.34 
 
 
358 aa  62.4  0.00000001  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_004311  BRA0720  ABC transporter, periplasmic substrate-binding protein  20.07 
 
 
341 aa  61.6  0.00000002  Brucella suis 1330  Bacteria  normal  0.631762  n/a   
 
 
-
 
NC_007802  Jann_1363  extracellular solute-binding protein  21.11 
 
 
340 aa  61.2  0.00000002  Jannaschia sp. CCS1  Bacteria  normal  0.634696  normal 
 
 
-
 
NC_009456  VC0395_0625  iron(III) ABC transporter, periplasmic iron-compound-binding protein  22.38 
 
 
344 aa  61.2  0.00000002  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009504  BOV_A0676  ABC transporter, periplasmic substrate-binding protein  20.07 
 
 
341 aa  61.6  0.00000002  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS1611  ABC transporter substrate-binding protein  22.57 
 
 
341 aa  60.5  0.00000004  Bacillus anthracis str. Sterne  Bacteria  normal  0.791321  n/a   
 
 
-
 
NC_007530  GBAA_1735  ABC transporter substrate-binding protein  22.57 
 
 
341 aa  60.5  0.00000004  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.313912  n/a   
 
 
-
 
NC_012852  Rleg_6061  extracellular solute-binding protein family 1  20.79 
 
 
342 aa  60.5  0.00000004  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_3844  extracellular solute-binding protein  24.07 
 
 
347 aa  60.5  0.00000004  Marinomonas sp. MWYL1  Bacteria  normal  0.367273  hitchhiker  0.0000000311792 
 
 
-
 
NC_013204  Elen_2031  ABC-type transporter, periplasmic component  23.78 
 
 
331 aa  60.1  0.00000005  Eggerthella lenta DSM 2243  Bacteria  normal  0.702659  hitchhiker  0.000664756 
 
 
-
 
NC_011369  Rleg2_1762  extracellular solute-binding protein family 1  21.49 
 
 
340 aa  59.7  0.00000006  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.66245  normal  0.133818 
 
 
-
 
NC_011831  Cagg_2416  extracellular solute-binding protein family 1  21.36 
 
 
349 aa  59.7  0.00000007  Chloroflexus aggregans DSM 9485  Bacteria  decreased coverage  0.0000133122  normal  0.0884701 
 
 
-
 
NC_013171  Apre_0051  extracellular solute-binding protein family 1  20.62 
 
 
378 aa  58.9  0.0000001  Anaerococcus prevotii DSM 20548  Bacteria  normal  0.115612  n/a   
 
 
-
 
NC_009953  Sare_1431  extracellular solute-binding protein  21.95 
 
 
355 aa  58.5  0.0000002  Salinispora arenicola CNS-205  Bacteria  normal  0.452816  hitchhiker  0.000555172 
 
 
-
 
NC_009767  Rcas_3171  extracellular solute-binding protein  22.26 
 
 
382 aa  57.8  0.0000003  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_008262  CPR_0223  hypothetical protein  24.4 
 
 
339 aa  57.4  0.0000003  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_6601  extracellular solute-binding protein family 1  24.54 
 
 
356 aa  57.8  0.0000003  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.252568 
 
 
-
 
NC_008309  HS_0641  Fe3+ ABC transporter, iron-binding protein  20.16 
 
 
343 aa  56.6  0.0000006  Haemophilus somnus 129PT  Bacteria  normal  0.147653  n/a   
 
 
-
 
NC_008554  Sfum_2899  extracellular solute-binding protein  23.11 
 
 
345 aa  56.6  0.0000006  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  decreased coverage  0.00994055 
 
 
-
 
NC_009523  RoseRS_2294  extracellular solute-binding protein  21.45 
 
 
381 aa  56.6  0.0000006  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_5871  extracellular solute-binding protein family 1  24.46 
 
 
342 aa  56.2  0.0000006  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0432658  n/a   
 
 
-
 
NC_009620  Smed_3752  extracellular solute-binding protein  22.54 
 
 
342 aa  55.8  0.0000009  Sinorhizobium medicae WSM419  Bacteria  normal  0.236177  normal 
 
 
-
 
NC_007519  Dde_3673  polyamine ABC transporter, periplasmic polyamine-binding protein  24.14 
 
 
348 aa  55.8  0.000001  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_008261  CPF_0223  putative iron compound ABC transporter, iron compound-binding protein  23.3 
 
 
339 aa  55.5  0.000001  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_1545  extracellular solute-binding protein family 1  23.83 
 
 
339 aa  55.5  0.000001  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.061269  n/a   
 
 
-
 
NC_009620  Smed_4877  extracellular solute-binding protein  26.32 
 
 
340 aa  54.7  0.000002  Sinorhizobium medicae WSM419  Bacteria  normal  0.713524  normal  0.38801 
 
 
-
 
NC_012880  Dd703_2485  extracellular solute-binding protein family 1  18.66 
 
 
343 aa  54.3  0.000003  Dickeya dadantii Ech703  Bacteria  normal  0.390798  n/a   
 
 
-
 
NC_013170  Ccur_04090  ABC-type Fe3+ transport system, periplasmic component  20.77 
 
 
367 aa  54.3  0.000003  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal  0.510256 
 
 
-
 
NC_009637  MmarC7_1107  extracellular solute-binding protein  21.21 
 
 
343 aa  54.3  0.000003  Methanococcus maripaludis C7  Archaea  normal  0.695758  normal 
 
 
-
 
NC_013421  Pecwa_2917  extracellular solute-binding protein family 1  22.9 
 
 
339 aa  53.5  0.000004  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_009635  Maeo_0333  extracellular solute-binding protein  23.53 
 
 
344 aa  53.5  0.000004  Methanococcus aeolicus Nankai-3  Archaea  normal  0.853179  n/a   
 
 
-
 
NC_009674  Bcer98_3791  ABC transporter, substrate-binding protein  21.17 
 
 
344 aa  53.1  0.000006  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_008686  Pden_1078  extracellular solute-binding protein  24.34 
 
 
322 aa  53.1  0.000006  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_009636  Smed_1948  extracellular solute-binding protein  21.23 
 
 
326 aa  53.1  0.000006  Sinorhizobium medicae WSM419  Bacteria  normal  0.113804  normal  0.383853 
 
 
-
 
NC_009135  MmarC5_1570  extracellular solute-binding protein  22.37 
 
 
350 aa  52.8  0.000007  Methanococcus maripaludis C5  Archaea  normal  0.840173  n/a   
 
 
-
 
NC_003912  CJE0168  iron ABC transporter, periplasmic iron-binding protein  21.47 
 
 
334 aa  52  0.00001  Campylobacter jejuni RM1221  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_0844  extracellular solute-binding protein  22.95 
 
 
335 aa  52  0.00001  Shewanella pealeana ATCC 700345  Bacteria  normal  0.680673  n/a   
 
 
-
 
NC_009832  Spro_3115  extracellular solute-binding protein  21.59 
 
 
342 aa  52  0.00001  Serratia proteamaculans 568  Bacteria  normal  0.0701659  normal 
 
 
-
 
NC_013757  Gobs_3650  extracellular solute-binding protein family 1  23.97 
 
 
343 aa  52.4  0.00001  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.0546711  n/a   
 
 
-
 
NC_003909  BCE_5376  putative lipoprotein  21.11 
 
 
344 aa  51.6  0.00002  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_1722  extracellular solute-binding protein  22.83 
 
 
379 aa  51.6  0.00002  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.0000849376  n/a   
 
 
-
 
NC_011658  BCAH187_A5430  putative lipoprotein  20.74 
 
 
344 aa  51.6  0.00002  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_008787  CJJ81176_0211  iron ABC transporter, periplasmic iron-binding protein  21.79 
 
 
334 aa  51.6  0.00002  Campylobacter jejuni subsp. jejuni 81-176  Bacteria  normal  n/a   
 
 
-
 
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