Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_0223 |
Symbol | |
ID | 4203219 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 273017 |
End bp | 274036 |
Gene Length | 1020 bp |
Protein Length | 339 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 638081107 |
Product | putative iron compound ABC transporter, iron compound-binding protein |
Protein accession | YP_694686 |
Protein GI | 110801336 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1840] ABC-type Fe3+ transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAAAT TTTTAAATAA AAAAATCACC ATAATATTAA CTATTATAAT TCTACTATTA ATAGCCAAAT TACATATTAT AAAAAAAGAA AAGGCTTTAA GTACATCTAA CATGAACCAT ATAGTTGTTT ATGGCTCTCT TAGAGAGGAA GAGGGTAAAT ATCTTCTTGA AAAATTTAAA AATAAATATG ATTGTACTTA TGAATATATA AAGCTTCCAA CGGAAGAAGC TGTGCAAAGA ATATTAGACA CCAGGGATAA TCCTCAAGGA GATATCTTTA TTGGGGGAAG CTGTGATGGA TATGAAATTT TGAAAAAGTA TGATGCCTTA GAAGAATATA ACTCTCCCTG GGCTAATAAT ATTCCTGCAA AATACAAGGA TTTAAGAGGA TATTGGACTG GTTTTCAAAT AACTCCACTA TCAATAGGAA TAAATAAATC TCTATGGCAA ACACATTTTG GAGGTTCTGT TCCCTACCCT AAGAAAATTG AGGACTTATT AAACCCAGAA TTTAAGGATA AAATAATACT TCCTAATCCT CAAACCTCTG GTACAGGATA TACCTTAATG GCATCACTTT ACCAGGAGCT AGGGAAAGAA AAGTTTGAAA CATTTATAGC TAAGCTTAAT GACAATGTAT CCTCTTCAAC CATAAGTGGA TTTAACTCAA TTCAAAGGGT TGCCTCTGGC GAATATCTTA TAACGGTTAA CTTTCTAAGT GACCAATTAA TAGCTAATAG ATCTTCAGAC AATATAATTA GCATAGTCCC TGAAAATGCT GGTTGGAATG TAGACTCTAT AGCTTTAATC AAAAATTCTA AACATGAAAA AATAGCTAAA AGCTTTATAG ACTTTGTATT ATCAAAGGAA ACCTCAAGTG ACTTATCAAA GTTCTCTAAG GCTATTTCTA CTAAGAACTT TGACACAAAT CAATTTAAAA TATATGATAA ATATAATTTC TATCTCGCTG CTGAAGATAG GGAAAAAATA ATGCAAATAC TCTATAAAAA TAAAGAGTAA
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Protein sequence | MKKFLNKKIT IILTIIILLL IAKLHIIKKE KALSTSNMNH IVVYGSLREE EGKYLLEKFK NKYDCTYEYI KLPTEEAVQR ILDTRDNPQG DIFIGGSCDG YEILKKYDAL EEYNSPWANN IPAKYKDLRG YWTGFQITPL SIGINKSLWQ THFGGSVPYP KKIEDLLNPE FKDKIILPNP QTSGTGYTLM ASLYQELGKE KFETFIAKLN DNVSSSTISG FNSIQRVASG EYLITVNFLS DQLIANRSSD NIISIVPENA GWNVDSIALI KNSKHEKIAK SFIDFVLSKE TSSDLSKFSK AISTKNFDTN QFKIYDKYNF YLAAEDREKI MQILYKNKE
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