Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_4317 |
Symbol | |
ID | 6163100 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 4829200 |
End bp | 4830231 |
Gene Length | 1032 bp |
Protein Length | 343 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641667094 |
Product | extracellular solute-binding protein |
Protein accession | YP_001793333 |
Protein GI | 171060984 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1840] ABC-type Fe3+ transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.362014 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACCC ATTCGATGCT CGCCGCCGCC ACGCTGCTCG GCGCCCTGCT GGCGCCGCTT TCTGCTGCCG CACAGGGTGA GCTGGTGGTG TATTGCACCG TGCAGGAAGA GTGGTGCCGG CCGATGGTCG CCGCCTTCGA GAAGAGCACT GGCATCAAGG TCTCGATGAC ACGCAAGAGC TCGGGCGAGT TCTATGCCCA GCTCAAGGCC GAGGCCGCCA ACCCGCGCGG CGACATCTGG TGGGGCGGCA CCGGCGACCC GCACATGCAG GCCGCCGAAG AAGGCCTGAC CGAGCCCTAC AAGTCGCCCA AGCTGGCCGA ACTGCAGGAC TGGGCGGTGC GCCAGGCCGA GCAGTCGAAG TACCGCACGG TGGGCATCTA CGCCGGCGCC CTCGGCTACA GCTACAACAC CGACGAGCTG AAGAAACGGG GTCTGCCCGA ACCCAAGTGC TGGGCCGACC TCACCACGCC CGCGTTCAAG GACGAGGTGC AGGTGGCGAA CCCGAACTCG TCGGGCACCT CGTACACCAT GCTCGCCACG CTGGTGCAGA TCATGGGCGA GGCCAAGGCC TTCGACTACC TGAAGGCGCT GCACAAGAAC GTCAACCAGT ACACCAAGAG CGGCGCCGCA CCGGCGCGCG CTGCGGCCAC CGGCGAGAGC CTGGTCGGCA TCACCTTCCA GCACGACGCG GTGATCCAGG CGCTGGGCGG CGCGCCGGTC AAGATCGTCT CGCCCTGCGA AGGCACCGGC TACGAGATCG GCAGCATGAG CATCGTCAAG GGCGCCAAGA ACATGGCCAA CGCCAAGCTC TGGTACGACT GGGCGCTGTC GGTCGAAGGC CAGGCGATCG GCGCGGCCAA CAAGGTGAGC TACCAGGTGC CGTCCAACAA GGCCGCGCCG GTGCCCGCCG CCGCGCCCAA GCTGGCCGAT ATCAAGCTGA TCAACTACGA CTTCGCCAAG TACGGCTCGT CAGCCGAACG CAAGCGCCTG CTGGGCAAGT GGGACGCTGA AGTCTCGACG CTGCCCAAGT GA
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Protein sequence | MKTHSMLAAA TLLGALLAPL SAAAQGELVV YCTVQEEWCR PMVAAFEKST GIKVSMTRKS SGEFYAQLKA EAANPRGDIW WGGTGDPHMQ AAEEGLTEPY KSPKLAELQD WAVRQAEQSK YRTVGIYAGA LGYSYNTDEL KKRGLPEPKC WADLTTPAFK DEVQVANPNS SGTSYTMLAT LVQIMGEAKA FDYLKALHKN VNQYTKSGAA PARAAATGES LVGITFQHDA VIQALGGAPV KIVSPCEGTG YEIGSMSIVK GAKNMANAKL WYDWALSVEG QAIGAANKVS YQVPSNKAAP VPAAAPKLAD IKLINYDFAK YGSSAERKRL LGKWDAEVST LPK
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