| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_1588 |
|---|
| Symbol | |
|---|
| ID | 4809579 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | - |
|---|
| Start bp | 1919023 |
|---|
| End bp | 1920129 |
|---|
| Gene Length | 1107 bp |
|---|
| Protein Length | 368 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 640107006 |
|---|
| Product | extracellular solute-binding protein |
|---|
| Protein accession | YP_001038007 |
|---|
| Protein GI | 125974097 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1840] ABC-type Fe3+ transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 49 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATTA AAAAAAGTTG GTTGGCACTT ATATTAGCAG CCCTAATGGC AATTTCTGTG
ACTGCATGTT CGGGTTCAAA GACAGAAACG ACTAAACAAG ACCCAACAAC TAAAAATCAA
GAAACAAACA ACAACAATAA TAATAACAAC AATAATAACG AAGAGAATGT ATTAGTAGTA
TATACGGCAA GAAGTGAAGA ATTAAATAAA GCTGTGATTT CAGAGTTTGA AAAAGAAACC
GGAATCAAAG TTGAATTGGT AACAGCAGGT ACAGGAGAAT TGCTTAAGCG TGTAGAGTCA
GAAAAAGACA ACCCATTGGG TGATATTTTA TGGGCAGCAG ACCGTACCAT GCTTGCTGCA
TCTGAGGATT TGTTCATGGA ATATGTATCC AAGGAAGACG GAAATATGAT GGAAGGATTC
CAGAACACAA CCGGATATTT TTCGCCGGCA TTTGCAGATC CAGCGGTATT TATTGTCAAT
ACTGACTTAA AAGGTGATAT AAAAATCGAA GGGTTTGAAG ATTTATTGAA TCCTAAACTG
AAAGGAAAGA TTGCTTTTGG AGATCCTGTC AACTCCAGTT CGGCATTCCA GTCTTTAGTT
GCAATGCTGT ATGCTATGGG CGAAAACAAT GACCCAATGT CCGATAAAGC ATGGGAGTTT
GTAGATCAAT TCTTAAAGAA CCTTGACGGC AAAATGGCTA ACAGCTCCAG TCAGGTATAT
AAAGGTGTGG CAGAAGGTGA ATATATTGTA GGACTTACCT GGGAAGACCC GGCTGCTAAA
TATGTAAAAG AGGGAGCTAA CGTTGAGGTT GTATTCCCTA AAGAAGGAAC CATTTTCCCG
GGTGAATCTG TGCAGATTAT AAAGAATTGC AAGCATCCGG AAAATGCAAA GAAATTTGTA
GATTTCATGC TGTCTGAAGA GGTTCAGAAC AGAGTGGGCT CCGAATTGAC AGTTCGTCCT
CTCAGAAAAG GTGCAAAATT GGCAGATTAT ATGACCCCTC AGTCCGAAAT TAAGTTATTC
AGTAACTATG ATGAAGGATG GGTTGCTGCA AACAAATTGG CAATTACAAA CAAGTTTAGC
GAGCACCTGG AATCATCTAT GGACTAA
|
|---|
| Protein sequence | MKIKKSWLAL ILAALMAISV TACSGSKTET TKQDPTTKNQ ETNNNNNNNN NNNEENVLVV
YTARSEELNK AVISEFEKET GIKVELVTAG TGELLKRVES EKDNPLGDIL WAADRTMLAA
SEDLFMEYVS KEDGNMMEGF QNTTGYFSPA FADPAVFIVN TDLKGDIKIE GFEDLLNPKL
KGKIAFGDPV NSSSAFQSLV AMLYAMGENN DPMSDKAWEF VDQFLKNLDG KMANSSSQVY
KGVAEGEYIV GLTWEDPAAK YVKEGANVEV VFPKEGTIFP GESVQIIKNC KHPENAKKFV
DFMLSEEVQN RVGSELTVRP LRKGAKLADY MTPQSEIKLF SNYDEGWVAA NKLAITNKFS
EHLESSMD
|
|---|
| |