Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_2294 |
Symbol | |
ID | 5209261 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 2833134 |
End bp | 2834279 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640595899 |
Product | extracellular solute-binding protein |
Protein accession | YP_001276623 |
Protein GI | 148656418 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1840] ABC-type Fe3+ transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCGTC TACCAGGACC ACTGGTCGCA CGTCTGATGA CGCTGATCAT CAGCGTCACA CTGATCGCAG CATGCGGCGG GCAACCTGCC GCGACTCCGC CAACCGCCGC ACCCGCCGAA CCCACGGCTG CACCAACGAC CGCACCCACC GAACCCACAG CGGCGCCGAC TGCACCAACG GCTGCACCCA CCGAACCCGC AGCAATGCCA AAGGGTGAGG TGGTCGTCTA TACGACGCGC GCCGAAGCGT TGTTCAAACC GGTCATCGAA GCGTTCAATG CTGCCTACCC TGATATCAAG GTCACCGTTC TGAACGGAAG CAATAGCGAA CTGGCTGCGC GTATTCTTGA GGAACGCGCC AATCCGAAAG CGGATGTGCT GATCAACTCG GATATTCTTA CGATGGAGAA CCTGGCTGCT GAAGGCGTGT TTGCGCCGAA TAACTCGCCA GCAGTGATGG CTGTTCCGGC TGATTATCGC GCTGATGATG GCAGCTGGGT CGCGTTGACG CTCCGCGCGC GTGTCATCAT GTACAATACA GACCTGGTTT CACCCGAAGA ATTGCCGAAA AAGATGGTCG ATCTCGCCGA TCCGAAATGG AAGGACGTGA TCGGCTCAGC CAACAGCACC AACGGCGCAA TGATGGCGCA ACTGGTCATC ATGCGCAATC AACTCGGCGA GCCGGCGACC GAAGCCTTCA TTCAGGGGTT GCTTGAGAAC AACGCGCAGT TCTTCGGCGG GCATACCGAT GTGCGTAAAG CGGTTGGCGC CGGCGAACTG AAACTCGGGC TGGTCAACCA TTACTACTAC CATCTCTCGA AGGCGGAAGG GGCGCCGGTT GGCGTCATCT ACCCTGATCA GGAAGATGGC GGATTGGGAT TGATGGTCAA TTCGACTAAT GCCGGTATCA TCAAGGGCGG ACCAAACCCG GAAATGGCAC GCATCTTCGT CGATTTCATG CTTTCGCCTG CCGGGCAGAA GATCTATGCT GAGCGGAACT ATGAGTACCC GATTGTGCCA GGTGTGCCGC TGGCAGAAGG AGTCGCGCCG CTCGATTCGT TCAGGTTGAA CCCTTTCCCG CTCAAAACAC TGCGGGATGA ACTGGAACCA ACCAGGGCGC TCGTCCAGAA GGTCGGTATG CCGTAA
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Protein sequence | MDRLPGPLVA RLMTLIISVT LIAACGGQPA ATPPTAAPAE PTAAPTTAPT EPTAAPTAPT AAPTEPAAMP KGEVVVYTTR AEALFKPVIE AFNAAYPDIK VTVLNGSNSE LAARILEERA NPKADVLINS DILTMENLAA EGVFAPNNSP AVMAVPADYR ADDGSWVALT LRARVIMYNT DLVSPEELPK KMVDLADPKW KDVIGSANST NGAMMAQLVI MRNQLGEPAT EAFIQGLLEN NAQFFGGHTD VRKAVGAGEL KLGLVNHYYY HLSKAEGAPV GVIYPDQEDG GLGLMVNSTN AGIIKGGPNP EMARIFVDFM LSPAGQKIYA ERNYEYPIVP GVPLAEGVAP LDSFRLNPFP LKTLRDELEP TRALVQKVGM P
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