Gene Cagg_2416 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2416 
Symbol 
ID7266139 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2934180 
End bp2935229 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content55% 
IMG OID643567242 
Productextracellular solute-binding protein family 1 
Protein accessionYP_002463725 
Protein GI219849292 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1840] ABC-type Fe3+ transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000133122 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0884701 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATCATG TGACTCGTAT CGGCGTGTTG ATCATCGCTG CGCTTATGAT CGCAGCATGT 
GGTAATCAGA CAGCATCTAC TCCGACGCAA GCACCGGCAG CACCTACTCC GACGCAAACA
CTGGCGAAAC TGGTCGTTTA TTCTGGCCGC AGTGAGAGCC TCGTCGGCCC CTTCTTTACC
CGATTCACCG AGGCTACCGG CATTCCGGTC GAAGTTCGTT ATGGTGATAC CGCCGAATTG
GCGGCGACGA TCCTTGAAGA GGGAGCCAAT AGCCCGGCCG ATCTCTTCTT TGCCCAAGAT
GCCGGCGCAT TGGGTGCATT AGCCGCAGCC GATGTGTTGA TCCCGCTCTC TACCGATATC
CTCAATCAGG TTGAAGCACG TTTCCGCTCG TCGGATGGTC GGTGGGTTGG GATTAGTGGT
CGCGCTCGTG TAGTCGTCTA CAACACCAAC AAGCTCACGG AGGCCGACCT GCCGCGTTCG
ATTACCGGTT TTGTCGATCC GCAATGGCGG GGGCGAGTTG GTTGGGCGCC GACCAACGGT
TCATTCCAAG CCTTTATTAC GGCAATGCGC GTACAGTTGG GAGAAGAGGC GACGCGCAAA
TGGTTAGAGG GGATGATTGC CAATGAGGTA AAGACGTATG AACGTAATGC GGCAATCGTG
CAGGCTGTAG CCGCCGGTGA GATTGATGTC GGGTTTGTGA ATCACTACTA CCTCTACCAA
TTGCAGCGTC AAGCGGGTGA TACACTGCCT GCCGCTAATT ACTATCCGGC TGATGGTGAT
GTAGGCGCGC TGATCAATAT TGCCGGTGTT GGCATTCTCA AGACGGCCAA GAACGTGGCT
GGAGCACAGC GGCTGATCGA GTATATGCTG TCAACCGACG GTCAACGTTA TTTTGCCGAA
CAGACCTTCG AGTATCCGCT GGCCGGTAAT GTACAACCCG ATCCACGATT AAAGCCCTTG
TCCGAGATCC AGACGCCTAA TATCGATTTG AATCAGTTGC GTGATTTGCA GGGTACGCTG
CAATTACTCC GCGAGGTGGG CGCTTTGTAA
 
Protein sequence
MNHVTRIGVL IIAALMIAAC GNQTASTPTQ APAAPTPTQT LAKLVVYSGR SESLVGPFFT 
RFTEATGIPV EVRYGDTAEL AATILEEGAN SPADLFFAQD AGALGALAAA DVLIPLSTDI
LNQVEARFRS SDGRWVGISG RARVVVYNTN KLTEADLPRS ITGFVDPQWR GRVGWAPTNG
SFQAFITAMR VQLGEEATRK WLEGMIANEV KTYERNAAIV QAVAAGEIDV GFVNHYYLYQ
LQRQAGDTLP AANYYPADGD VGALINIAGV GILKTAKNVA GAQRLIEYML STDGQRYFAE
QTFEYPLAGN VQPDPRLKPL SEIQTPNIDL NQLRDLQGTL QLLREVGAL