| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_1722 |
|---|
| Symbol | |
|---|
| ID | 5733609 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | - |
|---|
| Start bp | 2004947 |
|---|
| End bp | 2006086 |
|---|
| Gene Length | 1140 bp |
|---|
| Protein Length | 379 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641278864 |
|---|
| Product | extracellular solute-binding protein |
|---|
| Protein accession | YP_001544493 |
|---|
| Protein GI | 159898246 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1840] ABC-type Fe3+ transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0000849376 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAACTTG TGCGTTCTTT GATGCTGTTG CTCTGTCTGA GCATTGTGAT TGCAGCCTGT
GGTGGGGAAG CAACTCCAAC GGCTGTAACA GCACCAACCA CCGCTGCAGC AACCCCAACG
ACCGCTAGCG CAGCCGAAGC TACTGCTACC GTCGAAGTGA CTGCTATTGC TGAGGTTTCG
CCAACCGTGC CAACCACCAC CACCACTGAG CCAGCTGGCG GCAGTTTGGT TGTATATTCA
GGGCGTTCAG AAAGCTTAGT TGCTCCCTTG TTGGAGCTTT TTACCCAAGA AACTGGGATT
GCCGTCGAAG TACGCTATGG CGATACTGCC GAGATGGCCG CGCAAATTCT TGAAGAAGGC
GATAATAGCC CAGCCGATGT CTTCTTCGGC CAAGATGCTG GTGCATTAGG CGCATTGAGC
GATCGCTTTG TGCAACTTGA TCGGTCATTG TTGAACTTGG TTGATCCACG TTTTGTTTCA
AGCGAAGGCA CATGGGTTGG TGCTTCGGGT CGCGCTCGGG TTTTGGTTTA TAACACCGAT
GTCTTGACCA GCACCGATTT GCCAGCTTCG ATTCTTGATT TGACCAAACC AGAGTGGAAA
GGTCGGGTCG CTTGGGCTCC AACCAATGGT TCATTGCAAG CCTTTGTCAC CGCATTGCGG
GTAAGCCAAG GTGAAGATAT GGCCAAACAA TGGCTCGAAG GCATGATCGC CAACGACGTT
AAAGTCTATG AATCGAACTC AGCGATTGTC AAAGCCGTTG CGAGTGGCGA AGTTGATACC
GGCTTGGTCA ATCACTACTA CTTGTTTGCC TTGAAAAAAG AGCAACCAGA TGCCAAGGCT
GCTAACCACT ACTTCGGCAA TGGCGATATT GGCTCGTTGG TGAATGTTGC TGGCGTGGGT
GTGCTCAAAA CTGCCAAGAA TCCTGAAGCC GCTCAAACCT TTGCTAATTA TTTGTTGAGC
GACGGTGCCC AACTCTATTT CGCCGATAAA ACCAATGAAT ATCCCTTGGT AGCTGGAATT
ATTACCAACC CAGCAATCAA GCCATTGGGC GAAATTATTA CCCCAAACAT CGATTTGAGC
AATTTGAAAG ATTTGCAAGG AACCTTAGAA TTGTTGCAAG ATGTTGGGGC GATCCAATAA
|
|---|
| Protein sequence | MKLVRSLMLL LCLSIVIAAC GGEATPTAVT APTTAAATPT TASAAEATAT VEVTAIAEVS
PTVPTTTTTE PAGGSLVVYS GRSESLVAPL LELFTQETGI AVEVRYGDTA EMAAQILEEG
DNSPADVFFG QDAGALGALS DRFVQLDRSL LNLVDPRFVS SEGTWVGASG RARVLVYNTD
VLTSTDLPAS ILDLTKPEWK GRVAWAPTNG SLQAFVTALR VSQGEDMAKQ WLEGMIANDV
KVYESNSAIV KAVASGEVDT GLVNHYYLFA LKKEQPDAKA ANHYFGNGDI GSLVNVAGVG
VLKTAKNPEA AQTFANYLLS DGAQLYFADK TNEYPLVAGI ITNPAIKPLG EIITPNIDLS
NLKDLQGTLE LLQDVGAIQ
|
|---|
| |