More than 300 homologs were found in PanDaTox collection
for query gene Swol_2476 on replicon NC_008346
Organism: Syntrophomonas wolfei subsp. wolfei str. Goettingen



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008346  Swol_2476  ABC-type iron(III)-binding periplasmic protein precursor  100 
 
 
364 aa  740    Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  decreased coverage  0.00000339151  n/a   
 
 
-
 
NC_009637  MmarC7_1107  extracellular solute-binding protein  36.61 
 
 
343 aa  227  2e-58  Methanococcus maripaludis C7  Archaea  normal  0.695758  normal 
 
 
-
 
NC_009135  MmarC5_1570  extracellular solute-binding protein  37.54 
 
 
350 aa  227  3e-58  Methanococcus maripaludis C5  Archaea  normal  0.840173  n/a   
 
 
-
 
NC_013171  Apre_0051  extracellular solute-binding protein family 1  35.22 
 
 
378 aa  222  8e-57  Anaerococcus prevotii DSM 20548  Bacteria  normal  0.115612  n/a   
 
 
-
 
NC_008346  Swol_2479  ABC transporter, periplasmic substrate-binding protein  36.81 
 
 
347 aa  221  9.999999999999999e-57  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_009635  Maeo_0333  extracellular solute-binding protein  34.47 
 
 
344 aa  216  4e-55  Methanococcus aeolicus Nankai-3  Archaea  normal  0.853179  n/a   
 
 
-
 
NC_002967  TDE0386  ABC transporter, periplasmic substrate-binding protein  38.54 
 
 
338 aa  208  1e-52  Treponema denticola ATCC 35405  Bacteria  decreased coverage  0.00000551212  n/a   
 
 
-
 
NC_013170  Ccur_04090  ABC-type Fe3+ transport system, periplasmic component  33.33 
 
 
367 aa  191  2e-47  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal  0.510256 
 
 
-
 
NC_013515  Smon_0283  extracellular solute-binding protein family 1  29.72 
 
 
342 aa  158  1e-37  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_011772  BCG9842_B3970  putative iron compound ABC transporter, iron compound-binding protein  32.24 
 
 
358 aa  155  9e-37  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_2993  extracellular solute-binding protein family 1  30.65 
 
 
350 aa  155  1e-36  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1237  extracellular metal-binding protein  31.97 
 
 
358 aa  154  2.9999999999999998e-36  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS1235  iron compound ABC transporter iron compound-binding protein  31.69 
 
 
358 aa  153  4e-36  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_1212  iron ABC transporter solute-binding protein  31.69 
 
 
358 aa  153  4e-36  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK1214  iron ABC transporter solute-binding protein  31.69 
 
 
358 aa  153  4e-36  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A1476  putative iron compound ABC transporter, iron compound-binding protein  31.69 
 
 
358 aa  153  4e-36  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_1411  putative iron compound ABC transporter, iron compound-binding protein  31.69 
 
 
358 aa  153  4e-36  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_007530  GBAA_1337  iron compound ABC transporter iron compound-binding protein  31.69 
 
 
358 aa  153  4e-36  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_004311  BRA0720  ABC transporter, periplasmic substrate-binding protein  32.8 
 
 
341 aa  152  8.999999999999999e-36  Brucella suis 1330  Bacteria  normal  0.631762  n/a   
 
 
-
 
NC_009504  BOV_A0676  ABC transporter, periplasmic substrate-binding protein  32.8 
 
 
341 aa  152  1e-35  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A1374  putative iron compound ABC transporter, iron compound-binding protein  31.69 
 
 
358 aa  151  2e-35  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_1436  iron compound ABC transporter, iron compound-binding protein, putative  31.92 
 
 
346 aa  150  5e-35  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_3115  extracellular solute-binding protein  32 
 
 
342 aa  148  1.0000000000000001e-34  Serratia proteamaculans 568  Bacteria  normal  0.0701659  normal 
 
 
-
 
NC_009620  Smed_3752  extracellular solute-binding protein  31.43 
 
 
342 aa  146  7.0000000000000006e-34  Sinorhizobium medicae WSM419  Bacteria  normal  0.236177  normal 
 
 
-
 
NC_008786  Veis_0970  extracellular solute-binding protein  34.11 
 
 
340 aa  140  4.999999999999999e-32  Verminephrobacter eiseniae EF01-2  Bacteria  decreased coverage  0.00000273849  normal 
 
 
-
 
NC_011369  Rleg2_1761  extracellular solute-binding protein family 1  31.21 
 
 
341 aa  137  3.0000000000000003e-31  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.893641  normal  0.0475771 
 
 
-
 
NC_009456  VC0395_0625  iron(III) ABC transporter, periplasmic iron-compound-binding protein  30.38 
 
 
344 aa  137  4e-31  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_1097  extracellular solute-binding protein family 1  31.56 
 
 
337 aa  130  2.0000000000000002e-29  Variovorax paradoxus S110  Bacteria  normal  0.0890714  n/a   
 
 
-
 
NC_013421  Pecwa_1772  extracellular solute-binding protein family 1  31.4 
 
 
344 aa  130  3e-29  Pectobacterium wasabiae WPP163  Bacteria  normal  0.320595  n/a   
 
 
-
 
NC_012852  Rleg_6061  extracellular solute-binding protein family 1  30 
 
 
342 aa  130  3e-29  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_009674  Bcer98_1048  extracellular solute-binding protein  30.22 
 
 
356 aa  130  3e-29  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_4317  extracellular solute-binding protein  31.02 
 
 
343 aa  129  1.0000000000000001e-28  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.362014 
 
 
-
 
NC_010084  Bmul_3135  2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component  31.8 
 
 
351 aa  128  1.0000000000000001e-28  Burkholderia multivorans ATCC 17616  Bacteria  normal  hitchhiker  0.0000124491 
 
 
-
 
NC_007348  Reut_B5874  extracellular solute-binding protein  31.31 
 
 
341 aa  126  5e-28  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_008309  HS_0643  Fe3+ ABC transporter, iron-binding protein  28.77 
 
 
346 aa  125  8.000000000000001e-28  Haemophilus somnus 129PT  Bacteria  hitchhiker  0.000121089  n/a   
 
 
-
 
NC_008688  Pden_4649  extracellular solute-binding protein  28.23 
 
 
335 aa  126  8.000000000000001e-28  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_009620  Smed_4877  extracellular solute-binding protein  30.98 
 
 
340 aa  125  1e-27  Sinorhizobium medicae WSM419  Bacteria  normal  0.713524  normal  0.38801 
 
 
-
 
NC_011353  ECH74115_0435  extracellular solute-binding protein, family 1  29.57 
 
 
343 aa  125  1e-27  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_013421  Pecwa_2917  extracellular solute-binding protein family 1  31.25 
 
 
339 aa  125  1e-27  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_0833  extracellular solute-binding protein  29.69 
 
 
343 aa  125  1e-27  Enterobacter sp. 638  Bacteria  normal  normal  0.752683 
 
 
-
 
NC_008309  HS_0641  Fe3+ ABC transporter, iron-binding protein  30.2 
 
 
343 aa  125  1e-27  Haemophilus somnus 129PT  Bacteria  normal  0.147653  n/a   
 
 
-
 
NC_012917  PC1_1366  extracellular solute-binding protein family 1  30.38 
 
 
344 aa  125  1e-27  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.755106  n/a   
 
 
-
 
NC_012917  PC1_1545  extracellular solute-binding protein family 1  31.25 
 
 
339 aa  125  1e-27  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.061269  n/a   
 
 
-
 
NC_010508  Bcenmc03_3159  2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component  30.49 
 
 
351 aa  124  3e-27  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.451295  normal  0.0280644 
 
 
-
 
NC_009636  Smed_3281  extracellular solute-binding protein  30.59 
 
 
343 aa  123  4e-27  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_4977  extracellular solute-binding protein family 1  27.42 
 
 
347 aa  123  5e-27  Variovorax paradoxus S110  Bacteria  normal  0.187207  n/a   
 
 
-
 
NC_007510  Bcep18194_A6494  ABC Fe3+ siderophore transporter, periplasmic ligand binding protein  30.16 
 
 
351 aa  122  8e-27  Burkholderia sp. 383  Bacteria  decreased coverage  0.000128013  normal  0.750448 
 
 
-
 
NC_012880  Dd703_2485  extracellular solute-binding protein family 1  30.27 
 
 
343 aa  122  9.999999999999999e-27  Dickeya dadantii Ech703  Bacteria  normal  0.390798  n/a   
 
 
-
 
NC_009718  Fnod_1638  iron ABC transporter substrate-binding protein  28.91 
 
 
266 aa  120  3e-26  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_012852  Rleg_6060  extracellular solute-binding protein family 1  28.99 
 
 
340 aa  120  3.9999999999999996e-26  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_2899  extracellular solute-binding protein  34.67 
 
 
345 aa  120  3.9999999999999996e-26  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  decreased coverage  0.00994055 
 
 
-
 
NC_010002  Daci_1282  2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component  30.23 
 
 
347 aa  119  9.999999999999999e-26  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_011369  Rleg2_1762  extracellular solute-binding protein family 1  28.57 
 
 
340 aa  116  5e-25  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.66245  normal  0.133818 
 
 
-
 
NC_009512  Pput_5008  extracellular solute-binding protein  33.19 
 
 
341 aa  115  8.999999999999998e-25  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_0330  2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component  33.18 
 
 
341 aa  115  8.999999999999998e-25  Pseudomonas putida W619  Bacteria  normal  normal  0.631264 
 
 
-
 
NC_007492  Pfl01_5367  extracellular solute-binding protein  32.23 
 
 
341 aa  115  1.0000000000000001e-24  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_007802  Jann_1363  extracellular solute-binding protein  28.24 
 
 
340 aa  115  1.0000000000000001e-24  Jannaschia sp. CCS1  Bacteria  normal  0.634696  normal 
 
 
-
 
NC_007348  Reut_B5525  extracellular solute-binding protein  31.67 
 
 
340 aa  114  2.0000000000000002e-24  Ralstonia eutropha JMP134  Bacteria  normal  0.655164  n/a   
 
 
-
 
NC_002947  PP_5135  ABC transporter, periplasmic binding protein  32.74 
 
 
341 aa  114  3e-24  Pseudomonas putida KT2440  Bacteria  normal  0.659918  normal 
 
 
-
 
NC_010322  PputGB1_5188  2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component  32.3 
 
 
341 aa  112  8.000000000000001e-24  Pseudomonas putida GB-1  Bacteria  normal  0.491174  normal 
 
 
-
 
NC_007948  Bpro_4694  extracellular solute-binding protein  36.74 
 
 
349 aa  112  8.000000000000001e-24  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_009674  Bcer98_3791  ABC transporter, substrate-binding protein  30.77 
 
 
344 aa  111  2.0000000000000002e-23  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_010678  Rpic_4473  2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component  28.48 
 
 
341 aa  111  2.0000000000000002e-23  Ralstonia pickettii 12J  Bacteria  normal  normal  0.144148 
 
 
-
 
NC_012857  Rpic12D_4607  2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component  28.48 
 
 
341 aa  111  2.0000000000000002e-23  Ralstonia pickettii 12D  Bacteria  normal  0.980284  normal 
 
 
-
 
NC_011369  Rleg2_2481  extracellular solute-binding protein family 1  29.86 
 
 
330 aa  109  7.000000000000001e-23  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.37214  normal  0.635435 
 
 
-
 
NC_013457  VEA_000766  ABC transporter, periplasmic substrate-binding protein  30.33 
 
 
336 aa  108  1e-22  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_2736  extracellular solute-binding protein family 1  29.14 
 
 
325 aa  108  1e-22  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.288744  normal 
 
 
-
 
NC_014212  Mesil_1991  extracellular solute-binding protein family 1  26.62 
 
 
342 aa  108  2e-22  Meiothermus silvanus DSM 9946  Bacteria  decreased coverage  0.000248153  normal 
 
 
-
 
NC_011894  Mnod_5871  extracellular solute-binding protein family 1  29.2 
 
 
342 aa  107  3e-22  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0432658  n/a   
 
 
-
 
NC_009012  Cthe_1588  extracellular solute-binding protein  27.92 
 
 
368 aa  107  4e-22  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_008709  Ping_2746  ABC transporter periplasmic substrate-binding protein  32.77 
 
 
335 aa  106  5e-22  Psychromonas ingrahamii 37  Bacteria  normal  0.553799  normal 
 
 
-
 
NC_009784  VIBHAR_04877  ABC-type Fe3+ transport system periplasmic component  30.33 
 
 
336 aa  106  5e-22  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009636  Smed_1948  extracellular solute-binding protein  27.08 
 
 
326 aa  106  6e-22  Sinorhizobium medicae WSM419  Bacteria  normal  0.113804  normal  0.383853 
 
 
-
 
NC_013204  Elen_2031  ABC-type transporter, periplasmic component  29.33 
 
 
331 aa  105  1e-21  Eggerthella lenta DSM 2243  Bacteria  normal  0.702659  hitchhiker  0.000664756 
 
 
-
 
NC_003909  BCE_5376  putative lipoprotein  31.43 
 
 
344 aa  104  2e-21  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A5430  putative lipoprotein  31.43 
 
 
344 aa  104  2e-21  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_008044  TM1040_0544  extracellular solute-binding protein  29.01 
 
 
322 aa  104  2e-21  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_005957  BT9727_4941  ABC transporter substrate-binding protein  31.9 
 
 
344 aa  103  5e-21  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS5110  putative lipoprotein  31.9 
 
 
344 aa  103  6e-21  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_5501  putative lipoprotein  31.9 
 
 
344 aa  103  6e-21  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_009456  VC0395_0545  ABC transporter, periplasmic substrate-binding protein  31.78 
 
 
339 aa  103  6e-21  Vibrio cholerae O395  Bacteria  hitchhiker  0.001131  n/a   
 
 
-
 
NC_011772  BCG9842_B5572  putative lipoprotein  31.9 
 
 
344 aa  102  7e-21  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_011725  BCB4264_A5382  putative lipoprotein  31.9 
 
 
344 aa  102  7e-21  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_5350  putative lipoprotein  31.9 
 
 
344 aa  103  7e-21  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_006274  BCZK4956  ABC transporter substrate-binding protein  31.43 
 
 
344 aa  102  8e-21  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_5052  putative lipoprotein  30.95 
 
 
344 aa  102  8e-21  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_004116  SAG1945  iron ABC transporter, iron-binding protein  27.85 
 
 
345 aa  101  2e-20  Streptococcus agalactiae 2603V/R  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_0223  hypothetical protein  24.65 
 
 
339 aa  100  5e-20  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A3199  extracellular solute-binding protein  29.17 
 
 
338 aa  98.6  1e-19  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.680045  n/a   
 
 
-
 
NC_008688  Pden_4911  extracellular solute-binding protein  27.4 
 
 
333 aa  99  1e-19  Paracoccus denitrificans PD1222  Bacteria  normal  0.224202  normal  0.316622 
 
 
-
 
NC_011725  BCB4264_A1753  putative ABC transporter, substrate-binding protein  27.58 
 
 
341 aa  97.8  2e-19  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_1812  ABC transporter, substrate-binding protein, putative  27.86 
 
 
341 aa  97.4  3e-19  Bacillus cereus ATCC 10987  Bacteria  normal  0.98446  n/a   
 
 
-
 
NC_008261  CPF_0223  putative iron compound ABC transporter, iron compound-binding protein  24.65 
 
 
339 aa  97.4  3e-19  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A1866  putative ABC transporter, substrate-binding protein  27.86 
 
 
341 aa  97.1  4e-19  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_3231  extracellular solute-binding protein family 1  27.42 
 
 
325 aa  97.4  4e-19  Dickeya dadantii Ech703  Bacteria  normal  0.416701  n/a   
 
 
-
 
NC_011772  BCG9842_B3590  putative ABC transporter, substrate-binding protein  27.58 
 
 
341 aa  97.4  4e-19  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_006274  BCZK1563  ABC transporter, substrate-binding protein  27.58 
 
 
341 aa  96.7  6e-19  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_1586  extracellular solute-binding protein family 1  30.08 
 
 
333 aa  96.7  6e-19  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_008554  Sfum_3495  extracellular solute-binding protein  27.99 
 
 
375 aa  96.7  6e-19  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.0500866  normal  0.246878 
 
 
-
 
NC_011313  VSAL_II0811  extracellular solute-binding protein  28.88 
 
 
351 aa  95.9  9e-19  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
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