| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_2485 |
|---|
| Symbol | |
|---|
| ID | 8086875 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | + |
|---|
| Start bp | 2909572 |
|---|
| End bp | 2910603 |
|---|
| Gene Length | 1032 bp |
|---|
| Protein Length | 343 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 644836557 |
|---|
| Product | extracellular solute-binding protein family 1 |
|---|
| Protein accession | YP_002988086 |
|---|
| Protein GI | 242239905 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1840] ABC-type Fe3+ transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.390798 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACCTA CCCTGCTCTC CGCATTGGTC GTCGCCGGGC TGGCCGCCGC CGCATTCACC
GGCAGCGCGC ACGCGAAAGG CCGTCTGGTG GTTTACTGCA GCGCCACCAA CGAATTCTGC
GAGGAAGAAA CCAAAGCCTT CGGCGAGAAA TACGACGTCC AGACTTCGTT TATCCGTAAC
GGCTCCGGCA GTACGCTGGC GAAAATCGAA GCGGAGAAGA AAAACCCGCA GGCCGATGTC
TGGTACGGCG GCACGCTGGA TCCGCAATCA CAGGCGGGAG AGATGGATCT GCTGCAACCC
TATGCATCGC CGAATCTGGC GCAGATCATG CCGCAGTTCC GCGACCCGGC TAAACGCAAG
GGCAACTACT CCTCCGCCGT GTACATCGGT ATTCTCGGCG TCGGCGTCAA CGTCAACCGG
CTGAAAGAGA AAAACCTGCC GGAGCCGACC TGCTGGAAAG ATTTGACCAA CCCCATCTAC
AAAGGCGAGA TCCAAATCGC CGATCCGCAA AGCTCCGGCA CCGCCTACAC CGCGCTGGCC
ACCTTCTCCC AACTGTGGGG GGAAGATCAG GCGTTTGACT ACCTGAAGAA ACTGAACGCC
AACATCTCGC AATACACCAA ATCCGGCATC GCGCCGGCCC GCAACGCCGC CCGCGGCGAA
ACCGCCATCG GCATCGGCTT CCTGCACGAC TACGCCCAAG AGAGAGAAGC CGGCGCACCG
CTGAAGCTGA TCTCCCCGTG CGAAGGATCC GGCTATGAAA TCGGCGGCGT CAGCATCCTG
AAGAATGCCC GCAATCTGGA CAACGCCAAA CTGTTCATCG ACTGGGCGCT GTCCAAAGAA
GCGCAGGAAC TGTCCTGGAA GAAAGGCAAA TCCTACCAGA TCCTGACCAA CACCACGGCG
GAGGCCTCGC CGAACTCGCT GAAACTCAGC GAGCTGAAGC TGATTAACTA CGACATGGAT
AAATACGGAT CCGAAGAGGT TCGCAAAGCG TTGATCACCA AGTGGGTGAG CGAAGTGAAG
ATGGGTAAAT AA
|
|---|
| Protein sequence | MKPTLLSALV VAGLAAAAFT GSAHAKGRLV VYCSATNEFC EEETKAFGEK YDVQTSFIRN
GSGSTLAKIE AEKKNPQADV WYGGTLDPQS QAGEMDLLQP YASPNLAQIM PQFRDPAKRK
GNYSSAVYIG ILGVGVNVNR LKEKNLPEPT CWKDLTNPIY KGEIQIADPQ SSGTAYTALA
TFSQLWGEDQ AFDYLKKLNA NISQYTKSGI APARNAARGE TAIGIGFLHD YAQEREAGAP
LKLISPCEGS GYEIGGVSIL KNARNLDNAK LFIDWALSKE AQELSWKKGK SYQILTNTTA
EASPNSLKLS ELKLINYDMD KYGSEEVRKA LITKWVSEVK MGK
|
|---|
| |