238 homologs were found in PanDaTox collection
for query gene Ndas_3369 on replicon NC_014210
Organism: Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_014210  Ndas_3369  HAD-superfamily subfamily IB hydrolase, TIGR01490  100 
 
 
249 aa  493  1e-139  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_2094  HAD family hydrolase  51.43 
 
 
226 aa  190  2e-47  Frankia sp. CcI3  Bacteria  normal  0.07906  normal 
 
 
-
 
NC_010557  BamMC406_5696  HAD family hydrolase  38.74 
 
 
231 aa  117  1.9999999999999998e-25  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.0878159 
 
 
-
 
NC_007912  Sde_3483  hypothetical protein  33.85 
 
 
207 aa  97.1  2e-19  Saccharophagus degradans 2-40  Bacteria  normal  0.129655  normal  0.0813379 
 
 
-
 
NC_013093  Amir_0274  HAD-superfamily subfamily IB hydrolase, TIGR01490  33.78 
 
 
270 aa  87  3e-16  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_1214  HAD family hydrolase  33.18 
 
 
225 aa  85.5  7e-16  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.0597827  normal 
 
 
-
 
NC_013757  Gobs_0590  HAD-superfamily subfamily IB hydrolase, TIGR01490  32.41 
 
 
280 aa  84  0.000000000000002  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.841556  n/a   
 
 
-
 
NC_014158  Tpau_3910  HAD-superfamily subfamily IB hydrolase  31.42 
 
 
284 aa  82  0.000000000000008  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_009565  TBFG_13691  hypothetical protein  30.77 
 
 
287 aa  80.9  0.00000000000002  Mycobacterium tuberculosis F11  Bacteria  normal  0.148419  normal  0.360878 
 
 
-
 
NC_014151  Cfla_2800  HAD-superfamily subfamily IB hydrolase, TIGR01490  32.34 
 
 
275 aa  80.9  0.00000000000002  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.00283353 
 
 
-
 
NC_011145  AnaeK_2544  HAD-superfamily subfamily IB hydrolase, TIGR01490  28.89 
 
 
241 aa  80.1  0.00000000000003  Anaeromyxobacter sp. K  Bacteria  decreased coverage  0.00145664  n/a   
 
 
-
 
NC_011891  A2cp1_2640  HAD-superfamily subfamily IB hydrolase, TIGR01490  28.89 
 
 
241 aa  79.3  0.00000000000005  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.228843  n/a   
 
 
-
 
NC_009077  Mjls_5194  HAD family hydrolase  31.74 
 
 
285 aa  78.6  0.00000000000009  Mycobacterium sp. JLS  Bacteria  normal  0.421915  hitchhiker  0.000238579 
 
 
-
 
NC_008146  Mmcs_4807  HAD family hydrolase  31.74 
 
 
285 aa  78.2  0.0000000000001  Mycobacterium sp. MCS  Bacteria  normal  0.0376166  n/a   
 
 
-
 
NC_013159  Svir_35940  HAD-superfamily subfamily IB hydrolase, TIGR01490  31.92 
 
 
280 aa  78.2  0.0000000000001  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.330222  normal  0.156171 
 
 
-
 
NC_008705  Mkms_4893  HAD family hydrolase  31.74 
 
 
285 aa  78.2  0.0000000000001  Mycobacterium sp. KMS  Bacteria  normal  normal  0.271167 
 
 
-
 
NC_007760  Adeh_1316  HAD family hydrolase  28.44 
 
 
241 aa  77.4  0.0000000000002  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.021557  n/a   
 
 
-
 
NC_014151  Cfla_2740  HAD-superfamily subfamily IB hydrolase, TIGR01490  33.64 
 
 
288 aa  76.6  0.0000000000004  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal  0.0297875 
 
 
-
 
NC_009338  Mflv_1382  HAD family hydrolase  31.78 
 
 
307 aa  76.3  0.0000000000004  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.0503045  normal  0.084913 
 
 
-
 
NC_013440  Hoch_3628  HAD-superfamily subfamily IB hydrolase, TIGR01490  29.91 
 
 
232 aa  73.2  0.000000000003  Haliangium ochraceum DSM 14365  Bacteria  normal  0.856585  hitchhiker  0.00143877 
 
 
-
 
NC_008541  Arth_3299  HAD family hydrolase  31.84 
 
 
272 aa  73.6  0.000000000003  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_2112  HAD family hydrolase  33.96 
 
 
750 aa  73.2  0.000000000004  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_5423  HAD family hydrolase  30.88 
 
 
313 aa  73.2  0.000000000004  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.988036 
 
 
-
 
NC_013235  Namu_0916  HAD-superfamily subfamily IB hydrolase, TIGR01490  30.08 
 
 
297 aa  73.2  0.000000000004  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_2722  HAD family hydrolase  29.69 
 
 
305 aa  72.8  0.000000000005  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_2525  hypothetical protein  37.4 
 
 
140 aa  72.4  0.000000000006  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.636463 
 
 
-
 
NC_013441  Gbro_0515  HAD-superfamily subfamily IB hydrolase, TIGR01490  30.74 
 
 
289 aa  72.4  0.000000000006  Gordonia bronchialis DSM 43247  Bacteria  normal  0.589704  n/a   
 
 
-
 
NC_008699  Noca_1998  HAD family hydrolase  32.56 
 
 
799 aa  72.4  0.000000000006  Nocardioides sp. JS614  Bacteria  normal  0.15184  n/a   
 
 
-
 
NC_013131  Caci_0054  HAD-superfamily subfamily IB hydrolase, TIGR01490  31.38 
 
 
281 aa  72  0.000000000008  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_4585  HAD-superfamily subfamily IB hydrolase, TIGR01490  31.22 
 
 
306 aa  72  0.000000000009  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.601592  n/a   
 
 
-
 
NC_008699  Noca_0490  HAD family hydrolase  32.34 
 
 
297 aa  71.6  0.00000000001  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_0665  HAD-superfamily subfamily IB hydrolase, TIGR01490  30.34 
 
 
295 aa  71.2  0.00000000002  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.406953  n/a   
 
 
-
 
NC_011901  Tgr7_2416  HAD-superfamily subfamily IB hydrolase, TIGR01490  29.44 
 
 
219 aa  70.5  0.00000000002  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_6219  HAD-superfamily subfamily IB hydrolase TIGR01490  29.44 
 
 
289 aa  70.9  0.00000000002  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_011891  A2cp1_1328  HAD-superfamily subfamily IB hydrolase, TIGR01490  29.95 
 
 
225 aa  69.3  0.00000000005  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_1226  HAD-superfamily subfamily IB hydrolase, TIGR01490  29.95 
 
 
225 aa  69.7  0.00000000005  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_07130  HAD-superfamily subfamily IB hydrolase, TIGR01490  30.88 
 
 
311 aa  69.3  0.00000000006  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.371793 
 
 
-
 
NC_009675  Anae109_2447  HAD family hydrolase  27.7 
 
 
241 aa  69.3  0.00000000006  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.23096  normal 
 
 
-
 
NC_007760  Adeh_1167  HAD family hydrolase  29.49 
 
 
225 aa  68.6  0.00000000008  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_02790  HAD-superfamily subfamily IB hydrolase, TIGR01490  32.03 
 
 
323 aa  67.8  0.0000000001  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_007484  Noc_2017  HAD family hydrolase  26.91 
 
 
242 aa  68.2  0.0000000001  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_0520  HAD family hydrolase  28.7 
 
 
220 aa  68.2  0.0000000001  Methylobacillus flagellatus KT  Bacteria  normal  0.0927887  normal 
 
 
-
 
NC_013440  Hoch_6034  HAD-superfamily subfamily IB hydrolase, TIGR01490  28.51 
 
 
222 aa  68.2  0.0000000001  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_4446  HAD-superfamily subfamily IB hydrolase, TIGR01490  31.56 
 
 
290 aa  68.2  0.0000000001  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013124  Afer_1432  HAD-superfamily subfamily IB hydrolase, TIGR01490  30.51 
 
 
770 aa  67.8  0.0000000002  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  0.438652  n/a   
 
 
-
 
NC_009565  TBFG_10516  phosphoserine phosphatase serB1  30.88 
 
 
373 aa  67.8  0.0000000002  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_0813  HAD family hydrolase  28.83 
 
 
228 aa  67.4  0.0000000002  Marinobacter aquaeolei VT8  Bacteria  decreased coverage  0.00498763  n/a   
 
 
-
 
NC_014210  Ndas_4355  HAD-superfamily subfamily IB hydrolase, TIGR01490  31.76 
 
 
262 aa  67  0.0000000003  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.571582 
 
 
-
 
NC_009380  Strop_4041  HAD family hydrolase  28.34 
 
 
267 aa  66.6  0.0000000003  Salinispora tropica CNB-440  Bacteria  normal  0.946878  normal 
 
 
-
 
NC_014165  Tbis_0255  HAD-superfamily hydrolase  30.67 
 
 
286 aa  67  0.0000000003  Thermobispora bispora DSM 43833  Bacteria  normal  0.185675  normal 
 
 
-
 
NC_013947  Snas_6363  HAD-superfamily subfamily IB hydrolase TIGR01490  29.82 
 
 
272 aa  66.6  0.0000000004  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.499829  normal 
 
 
-
 
NC_013441  Gbro_4653  HAD-superfamily subfamily IB hydrolase, TIGR01490  31.6 
 
 
493 aa  66.6  0.0000000004  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_0069  HAD family hydrolase  31.74 
 
 
295 aa  65.9  0.0000000005  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.0248353  normal 
 
 
-
 
NC_011886  Achl_3098  HAD-superfamily subfamily IB hydrolase, TIGR01490  31.44 
 
 
272 aa  65.9  0.0000000006  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_009953  Sare_0418  HAD family hydrolase  31.2 
 
 
312 aa  65.5  0.0000000007  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.00884178 
 
 
-
 
NC_013521  Sked_33380  HAD-superfamily subfamily IB hydrolase, TIGR01490  30.22 
 
 
265 aa  65.1  0.0000000009  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.156612  normal 
 
 
-
 
NC_013131  Caci_8329  HAD-superfamily subfamily IB hydrolase, TIGR01490  29.02 
 
 
266 aa  64.7  0.000000001  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.119426  normal 
 
 
-
 
NC_013093  Amir_6738  HAD-superfamily subfamily IB hydrolase, TIGR01490  29.3 
 
 
294 aa  63.9  0.000000002  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_007614  Nmul_A2615  HAD family hydrolase  26.73 
 
 
220 aa  63.9  0.000000002  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_013124  Afer_1925  HAD-superfamily subfamily IB hydrolase, TIGR01490  29.26 
 
 
273 aa  63.9  0.000000002  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_0843  HAD family hydrolase  30.7 
 
 
301 aa  64.3  0.000000002  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.163877  normal  0.772835 
 
 
-
 
NC_009365  OSTLU_26514  predicted protein  29.06 
 
 
262 aa  63.9  0.000000002  Ostreococcus lucimarinus CCE9901  Eukaryota  normal  0.0100496  normal  0.0236046 
 
 
-
 
NC_009921  Franean1_6135  HAD family hydrolase  30.7 
 
 
294 aa  63.5  0.000000003  Frankia sp. EAN1pec  Bacteria  normal  normal  0.415462 
 
 
-
 
NC_008146  Mmcs_0674  HAD family hydrolase  30.3 
 
 
300 aa  63.9  0.000000003  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_0687  HAD family hydrolase  30.3 
 
 
300 aa  63.9  0.000000003  Mycobacterium sp. KMS  Bacteria  normal  normal  0.164292 
 
 
-
 
NC_013595  Sros_0542  Phosphoserine phosphatase-like protein  30.64 
 
 
289 aa  63.5  0.000000003  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.260991 
 
 
-
 
NC_009077  Mjls_0667  HAD family hydrolase  30.3 
 
 
300 aa  63.9  0.000000003  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_4170  HAD family hydrolase  31.42 
 
 
787 aa  63.2  0.000000003  Frankia sp. EAN1pec  Bacteria  normal  0.243579  normal  0.356217 
 
 
-
 
NC_013441  Gbro_1010  HAD-superfamily subfamily IB hydrolase, TIGR01490  30.88 
 
 
352 aa  63.2  0.000000004  Gordonia bronchialis DSM 43247  Bacteria  normal  0.784708  n/a   
 
 
-
 
NC_013422  Hneap_0991  HAD-superfamily subfamily IB hydrolase, TIGR01490  27.01 
 
 
218 aa  62.4  0.000000006  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_1870  hypothetical protein  29.77 
 
 
216 aa  62  0.000000008  Pseudomonas aeruginosa PA7  Bacteria  normal  0.531495  n/a   
 
 
-
 
NC_007912  Sde_0346  XRE family transcriptional regulator  24.88 
 
 
218 aa  62  0.000000008  Saccharophagus degradans 2-40  Bacteria  normal  0.923957  normal  0.0904875 
 
 
-
 
NC_012669  Bcav_3259  HAD-superfamily subfamily IB hydrolase, TIGR01490  38.39 
 
 
263 aa  62  0.000000008  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.107889  normal  0.303521 
 
 
-
 
NC_007005  Psyr_1601  HAD family hydrolase  28.44 
 
 
217 aa  62  0.000000009  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.0403422 
 
 
-
 
NC_013203  Apar_0119  HAD-superfamily subfamily IB hydrolase, TIGR01490  33.48 
 
 
237 aa  61.2  0.00000001  Atopobium parvulum DSM 20469  Bacteria  unclonable  0.00000000400181  normal  0.0929396 
 
 
-
 
NC_008541  Arth_2123  phosphoserine phosphatase  30.05 
 
 
297 aa  61.2  0.00000001  Arthrobacter sp. FB24  Bacteria  normal  0.0782028  n/a   
 
 
-
 
NC_009664  Krad_0614  HAD-superfamily subfamily IB hydrolase, TIGR01490  32.41 
 
 
255 aa  61.2  0.00000002  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.160629  normal  0.0475682 
 
 
-
 
NC_013521  Sked_19450  phosphoserine phosphatase  27.97 
 
 
778 aa  60.5  0.00000002  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_4432  HAD family hydrolase  27.31 
 
 
270 aa  60.8  0.00000002  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.000343409 
 
 
-
 
NC_008463  PA14_04380  hypothetical protein  27.31 
 
 
217 aa  60.8  0.00000002  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_013889  TK90_0395  HAD-superfamily subfamily IB hydrolase, TIGR01490  27.39 
 
 
228 aa  60.8  0.00000002  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.771269  normal  0.534217 
 
 
-
 
NC_004578  PSPTO_5286  HAD-superfamily hydrolase  26.76 
 
 
218 aa  60.5  0.00000003  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_4644  HAD-superfamily subfamily IB hydrolase, TIGR01490  30.04 
 
 
286 aa  60.1  0.00000003  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.460145 
 
 
-
 
NC_009654  Mmwyl1_3749  HAD family hydrolase  23.53 
 
 
218 aa  60.5  0.00000003  Marinomonas sp. MWYL1  Bacteria  normal  normal  0.045267 
 
 
-
 
NC_007963  Csal_2578  HAD family hydrolase  35.48 
 
 
218 aa  60.1  0.00000003  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_0428  hypothetical protein  27.91 
 
 
217 aa  60.1  0.00000003  Pseudomonas aeruginosa PA7  Bacteria  normal  0.469146  n/a   
 
 
-
 
NC_013172  Bfae_27140  HAD-superfamily subfamily IB hydrolase, TIGR01490  28.38 
 
 
768 aa  60.5  0.00000003  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_4075  HAD family hydrolase  27.35 
 
 
525 aa  60.1  0.00000003  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.588653 
 
 
-
 
NC_009338  Mflv_3285  HAD family hydrolase  29.91 
 
 
249 aa  60.1  0.00000003  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.651915 
 
 
-
 
NC_010322  PputGB1_5200  HAD family hydrolase  27.01 
 
 
218 aa  59.7  0.00000004  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_0318  HAD family hydrolase  27.06 
 
 
218 aa  59.3  0.00000005  Pseudomonas putida W619  Bacteria  normal  normal  0.13474 
 
 
-
 
NC_012791  Vapar_3061  HAD-superfamily subfamily IB hydrolase, TIGR01490  26.91 
 
 
222 aa  59.3  0.00000005  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_0426  HAD family hydrolase  29.55 
 
 
231 aa  59.3  0.00000005  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal  0.0139155 
 
 
-
 
NC_013889  TK90_1009  HAD-superfamily subfamily IB hydrolase, TIGR01490  31.5 
 
 
217 aa  59.3  0.00000005  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.534217 
 
 
-
 
NC_007492  Pfl01_5379  HAD family hydrolase  26.76 
 
 
218 aa  58.9  0.00000006  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.396939  normal  0.0228377 
 
 
-
 
NC_009380  Strop_0348  HAD family hydrolase  31.23 
 
 
290 aa  59.3  0.00000006  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_5002  HAD-superfamily subfamily IB hydrolase, TIGR01490  28.23 
 
 
488 aa  59.3  0.00000006  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_2564  HAD family hydrolase  26.29 
 
 
570 aa  58.9  0.00000008  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.341145  normal  0.242767 
 
 
-
 
NC_007005  Psyr_4844  HAD family hydrolase  26.29 
 
 
218 aa  57.8  0.0000001  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_3131  HAD family hydrolase  29.86 
 
 
225 aa  58.2  0.0000001  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
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