Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apar_0119 |
Symbol | |
ID | 8412963 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Atopobium parvulum DSM 20469 |
Kingdom | Bacteria |
Replicon accession | NC_013203 |
Strand | + |
Start bp | 134044 |
End bp | 134757 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 645021687 |
Product | HAD-superfamily subfamily IB hydrolase, TIGR01490 |
Protein accession | YP_003179146 |
Protein GI | 257783929 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0560] Phosphoserine phosphatase |
TIGRFAM ID | [TIGR01488] Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like [TIGR01490] HAD-superfamily subfamily IB hydrolase, TIGR01490 |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000000400181 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0929396 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGCAG AATCTTCAAT CACAGAATCC ACTTCAGATT CAATCAAGAA AATTGCTGTT TTTGATTTTG ACGGAACCGT CATTTCTGGA CAGTCGGGAT TCTTGTTCTC TGCGTATTTG CTTCGTCGCC ATCTGTCTTC AGTTTCTCGT ACGTTAAAGC TCATGTGGTG GGGAGCGCGC TATAAATTGC ACCTTCCTCA GAGGCAGGAG GAGGCACGCG AGCTGGTTGT TGGCGCACTT ACGCAGTACA GCATTGAGTT TGCAAATGCT GTCATGCACG ATTTTCATCG TGAGGTGATT GAGGGTATGT ATCGCCCTCA GGCACTGGAA GAGGTGCGTC GTCGGCAGGC AGAAGGTTGC TGCGTATTGT TGGTTTCAGC AACATTTGAG CCTATTGCGG AGTTGGCCGC AAAGAAGCTG GGAGTGGACG CGTTTCTCGC CACAAAGATG CAGGTGGGAG CAGATGGACA CTATACCAGT AAGGTTGACG GTCCTGTGAT TGAAGGCGCT CAGAAGTTGG TCTCGGCAAC CGAGTGGTGC AACCAGCATT ATGGCAAGGG TAATTGGGAG CTTGCATACG CGTATGGCGA CCATTACTCG GATGCAACAC TTTTGTCAGC AGCACAAACA CCATGTGCTG TTTGCCCTGG TCCAACACTT ACCAGGCTTG CGAATAAGCG CGGTTGGACA ATTTTGAACT GGGAGAACGA TTAA
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Protein sequence | MPAESSITES TSDSIKKIAV FDFDGTVISG QSGFLFSAYL LRRHLSSVSR TLKLMWWGAR YKLHLPQRQE EARELVVGAL TQYSIEFANA VMHDFHREVI EGMYRPQALE EVRRRQAEGC CVLLVSATFE PIAELAAKKL GVDAFLATKM QVGADGHYTS KVDGPVIEGA QKLVSATEWC NQHYGKGNWE LAYAYGDHYS DATLLSAAQT PCAVCPGPTL TRLANKRGWT ILNWEND
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