244 homologs were found in PanDaTox collection
for query gene Apar_0119 on replicon NC_013203
Organism: Atopobium parvulum DSM 20469



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013203  Apar_0119  HAD-superfamily subfamily IB hydrolase, TIGR01490  100 
 
 
237 aa  496  1e-139  Atopobium parvulum DSM 20469  Bacteria  unclonable  0.00000000400181  normal  0.0929396 
 
 
-
 
NC_013204  Elen_1268  HAD-superfamily subfamily IB hydrolase, TIGR01490  40.66 
 
 
239 aa  184  2.0000000000000003e-45  Eggerthella lenta DSM 2243  Bacteria  hitchhiker  0.00200107  normal 
 
 
-
 
NC_013165  Shel_12860  HAD-superfamily subfamily IB hydrolase, TIGR01490  41.92 
 
 
233 aa  181  8.000000000000001e-45  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.0281228  normal 
 
 
-
 
NC_013170  Ccur_08610  HAD-superfamily subfamily IB hydrolase, TIGR01490  37.44 
 
 
236 aa  150  1e-35  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal  0.294075 
 
 
-
 
NC_013159  Svir_35940  HAD-superfamily subfamily IB hydrolase, TIGR01490  28.15 
 
 
280 aa  84.7  0.000000000000001  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.330222  normal  0.156171 
 
 
-
 
NC_009338  Mflv_3285  HAD family hydrolase  28.9 
 
 
249 aa  83.2  0.000000000000003  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.651915 
 
 
-
 
NC_008709  Ping_3161  HAD family hydrolase  28.64 
 
 
252 aa  83.2  0.000000000000003  Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_2740  HAD-superfamily subfamily IB hydrolase, TIGR01490  30.41 
 
 
288 aa  82  0.000000000000008  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal  0.0297875 
 
 
-
 
NC_013530  Xcel_0438  HAD-superfamily subfamily IB hydrolase, TIGR01490  28.64 
 
 
268 aa  81.3  0.00000000000001  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_1770  HAD family hydrolase  31.47 
 
 
234 aa  80.9  0.00000000000001  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_4844  HAD family hydrolase  27.07 
 
 
218 aa  80.9  0.00000000000002  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_014150  Bmur_0606  HAD-superfamily subfamily IB hydrolase, TIGR01490  27.15 
 
 
219 aa  80.9  0.00000000000002  Brachyspira murdochii DSM 12563  Bacteria  hitchhiker  0.000000630267  n/a   
 
 
-
 
NC_009338  Mflv_2564  HAD family hydrolase  27.98 
 
 
570 aa  80.1  0.00000000000002  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.341145  normal  0.242767 
 
 
-
 
NC_013515  Smon_1443  HAD-superfamily hydrolase, subfamily IB (PSPase- like)  25.35 
 
 
200 aa  79  0.00000000000005  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_013757  Gobs_0590  HAD-superfamily subfamily IB hydrolase, TIGR01490  28.89 
 
 
280 aa  79.3  0.00000000000005  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.841556  n/a   
 
 
-
 
NC_008726  Mvan_4075  HAD family hydrolase  27.98 
 
 
525 aa  79  0.00000000000006  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.588653 
 
 
-
 
NC_013521  Sked_07130  HAD-superfamily subfamily IB hydrolase, TIGR01490  27.59 
 
 
311 aa  79  0.00000000000007  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.371793 
 
 
-
 
NC_008048  Sala_0482  HAD family hydrolase  28.27 
 
 
239 aa  78.6  0.00000000000009  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_013124  Afer_1925  HAD-superfamily subfamily IB hydrolase, TIGR01490  31.7 
 
 
273 aa  78.2  0.0000000000001  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_5379  HAD family hydrolase  28.19 
 
 
218 aa  77.4  0.0000000000002  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.396939  normal  0.0228377 
 
 
-
 
NC_013440  Hoch_6034  HAD-superfamily subfamily IB hydrolase, TIGR01490  26.82 
 
 
222 aa  77.4  0.0000000000002  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_011891  A2cp1_1328  HAD-superfamily subfamily IB hydrolase, TIGR01490  26.75 
 
 
225 aa  77  0.0000000000002  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_1226  HAD-superfamily subfamily IB hydrolase, TIGR01490  26.91 
 
 
225 aa  76.3  0.0000000000004  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_0520  HAD family hydrolase  25.55 
 
 
220 aa  75.9  0.0000000000005  Methylobacillus flagellatus KT  Bacteria  normal  0.0927887  normal 
 
 
-
 
NC_011992  Dtpsy_2419  HAD-superfamily subfamily IB hydrolase, TIGR01490  25.75 
 
 
233 aa  75.9  0.0000000000005  Acidovorax ebreus TPSY  Bacteria  normal  0.858824  n/a   
 
 
-
 
NC_008782  Ajs_2992  HAD family hydrolase  25.75 
 
 
233 aa  75.9  0.0000000000005  Acidovorax sp. JS42  Bacteria  normal  0.0456424  normal  0.731266 
 
 
-
 
NC_011206  Lferr_0902  HAD-superfamily subfamily IB hydrolase, TIGR01490  27.9 
 
 
230 aa  75.5  0.0000000000007  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.101359  normal 
 
 
-
 
NC_009654  Mmwyl1_3749  HAD family hydrolase  25.69 
 
 
218 aa  75.5  0.0000000000007  Marinomonas sp. MWYL1  Bacteria  normal  normal  0.045267 
 
 
-
 
NC_011761  AFE_0756  HAD-superfamily subfamily IB hydrolase, TIGR01490  27.9 
 
 
230 aa  75.5  0.0000000000007  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.168454  n/a   
 
 
-
 
NC_010002  Daci_2187  HAD family hydrolase  32.37 
 
 
233 aa  75.5  0.0000000000008  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_002977  MCA2087  HAD family hydrolase  27.06 
 
 
220 aa  74.7  0.000000000001  Methylococcus capsulatus str. Bath  Bacteria  hitchhiker  0.00266008  n/a   
 
 
-
 
NC_010524  Lcho_0674  HAD family hydrolase  27.83 
 
 
227 aa  73.9  0.000000000002  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_013093  Amir_0274  HAD-superfamily subfamily IB hydrolase, TIGR01490  25.11 
 
 
270 aa  73.6  0.000000000003  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_1167  HAD family hydrolase  26.01 
 
 
225 aa  73.6  0.000000000003  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_0426  HAD family hydrolase  28.38 
 
 
231 aa  73.2  0.000000000003  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal  0.0139155 
 
 
-
 
NC_008752  Aave_1972  HAD family hydrolase  25.83 
 
 
237 aa  73.6  0.000000000003  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.0197287 
 
 
-
 
NC_004578  PSPTO_5286  HAD-superfamily hydrolase  25.33 
 
 
218 aa  73.2  0.000000000004  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_0813  HAD family hydrolase  24.31 
 
 
228 aa  72.8  0.000000000004  Marinobacter aquaeolei VT8  Bacteria  decreased coverage  0.00498763  n/a   
 
 
-
 
NC_013235  Namu_0916  HAD-superfamily subfamily IB hydrolase, TIGR01490  25 
 
 
297 aa  72.4  0.000000000005  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_009524  PsycPRwf_0837  HAD family hydrolase  26.11 
 
 
231 aa  72.4  0.000000000006  Psychrobacter sp. PRwf-1  Bacteria  normal  normal  0.883121 
 
 
-
 
NC_010501  PputW619_1270  HAD family hydrolase  28.51 
 
 
217 aa  72  0.000000000007  Pseudomonas putida W619  Bacteria  normal  normal  0.0449796 
 
 
-
 
NC_009380  Strop_4041  HAD family hydrolase  27.68 
 
 
267 aa  72  0.000000000008  Salinispora tropica CNB-440  Bacteria  normal  0.946878  normal 
 
 
-
 
NC_007204  Psyc_0818  hypothetical protein  25.42 
 
 
238 aa  72  0.000000000008  Psychrobacter arcticus 273-4  Bacteria  normal  normal  0.0281018 
 
 
-
 
NC_013172  Bfae_27140  HAD-superfamily subfamily IB hydrolase, TIGR01490  28.51 
 
 
768 aa  71.2  0.00000000001  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_4355  HAD-superfamily subfamily IB hydrolase, TIGR01490  24.57 
 
 
262 aa  71.6  0.00000000001  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.571582 
 
 
-
 
NC_014151  Cfla_2800  HAD-superfamily subfamily IB hydrolase, TIGR01490  29.28 
 
 
275 aa  71.6  0.00000000001  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.00283353 
 
 
-
 
NC_009675  Anae109_1214  HAD family hydrolase  26.11 
 
 
225 aa  71.2  0.00000000001  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.0597827  normal 
 
 
-
 
NC_012669  Bcav_3259  HAD-superfamily subfamily IB hydrolase, TIGR01490  26.11 
 
 
263 aa  71.2  0.00000000001  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.107889  normal  0.303521 
 
 
-
 
NC_002947  PP_5147  HAD superfamily hydrolase  27.12 
 
 
218 aa  70.5  0.00000000002  Pseudomonas putida KT2440  Bacteria  normal  normal  0.416091 
 
 
-
 
NC_010508  Bcenmc03_0728  HAD family hydrolase  29.91 
 
 
225 aa  70.5  0.00000000002  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.844244  normal 
 
 
-
 
NC_009512  Pput_5054  HAD family hydrolase  27.12 
 
 
218 aa  70.5  0.00000000002  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_008060  Bcen_0275  HAD family hydrolase  29.91 
 
 
225 aa  70.5  0.00000000002  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_4807  HAD family hydrolase  25.2 
 
 
285 aa  70.5  0.00000000002  Mycobacterium sp. MCS  Bacteria  normal  0.0376166  n/a   
 
 
-
 
NC_009656  PSPA7_0428  hypothetical protein  27.27 
 
 
217 aa  70.9  0.00000000002  Pseudomonas aeruginosa PA7  Bacteria  normal  0.469146  n/a   
 
 
-
 
NC_008542  Bcen2424_0759  HAD family hydrolase  29.91 
 
 
225 aa  70.5  0.00000000002  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_4893  HAD family hydrolase  25.2 
 
 
285 aa  70.5  0.00000000002  Mycobacterium sp. KMS  Bacteria  normal  normal  0.271167 
 
 
-
 
NC_010681  Bphyt_0745  HAD-superfamily subfamily IB hydrolase, TIGR01490  28.38 
 
 
228 aa  70.9  0.00000000002  Burkholderia phytofirmans PsJN  Bacteria  decreased coverage  0.00362986  normal  0.517571 
 
 
-
 
NC_008781  Pnap_2992  HAD family hydrolase  26.72 
 
 
235 aa  70.9  0.00000000002  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.623044 
 
 
-
 
NC_008825  Mpe_A3021  hypothetical protein  32.17 
 
 
222 aa  70.9  0.00000000002  Methylibium petroleiphilum PM1  Bacteria  normal  0.344773  normal 
 
 
-
 
NC_007484  Noc_2017  HAD family hydrolase  26.58 
 
 
242 aa  70.1  0.00000000003  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_3910  HAD-superfamily subfamily IB hydrolase  27.31 
 
 
284 aa  70.1  0.00000000003  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_012560  Avin_48250  HAD-superfamily hydrolase subfamily IB, PSPase-like protein  26.75 
 
 
217 aa  70.1  0.00000000003  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_010678  Rpic_4471  HAD-superfamily subfamily IB hydrolase, TIGR01490  28.19 
 
 
227 aa  70.1  0.00000000003  Ralstonia pickettii 12J  Bacteria  normal  0.470983  normal  0.0960522 
 
 
-
 
NC_013521  Sked_33380  HAD-superfamily subfamily IB hydrolase, TIGR01490  28 
 
 
265 aa  70.1  0.00000000003  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.156612  normal 
 
 
-
 
NC_012857  Rpic12D_4605  HAD-superfamily subfamily IB hydrolase, TIGR01490  28.19 
 
 
227 aa  70.1  0.00000000003  Ralstonia pickettii 12D  Bacteria  normal  0.844177  normal 
 
 
-
 
NC_010322  PputGB1_1313  HAD family hydrolase  27.6 
 
 
217 aa  70.1  0.00000000003  Pseudomonas putida GB-1  Bacteria  normal  normal  0.448818 
 
 
-
 
NC_009512  Pput_3998  HAD family hydrolase  27.6 
 
 
217 aa  70.1  0.00000000003  Pseudomonas putida F1  Bacteria  normal  0.050869  normal  0.239622 
 
 
-
 
NC_007969  Pcryo_0833  HAD family hydrolase  25 
 
 
235 aa  69.7  0.00000000004  Psychrobacter cryohalolentis K5  Bacteria  normal  normal 
 
 
-
 
NC_007614  Nmul_A2615  HAD family hydrolase  26.24 
 
 
220 aa  69.3  0.00000000005  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_1624  HAD family hydrolase  25.79 
 
 
218 aa  69.3  0.00000000005  Serratia proteamaculans 568  Bacteria  normal  normal  0.0119035 
 
 
-
 
NC_008463  PA14_04380  hypothetical protein  27.35 
 
 
217 aa  69.3  0.00000000005  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A3954  HAD family hydrolase  27.95 
 
 
228 aa  68.9  0.00000000006  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.0220849 
 
 
-
 
NC_009953  Sare_4432  HAD family hydrolase  26.67 
 
 
270 aa  68.9  0.00000000006  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.000343409 
 
 
-
 
NC_010551  BamMC406_0678  HAD family hydrolase  29.49 
 
 
225 aa  68.9  0.00000000007  Burkholderia ambifaria MC40-6  Bacteria  normal  0.161467  normal 
 
 
-
 
NC_009077  Mjls_5194  HAD family hydrolase  24.8 
 
 
285 aa  68.9  0.00000000007  Mycobacterium sp. JLS  Bacteria  normal  0.421915  hitchhiker  0.000238579 
 
 
-
 
NC_009439  Pmen_1327  HAD family hydrolase  25.79 
 
 
217 aa  68.9  0.00000000007  Pseudomonas mendocina ymp  Bacteria  decreased coverage  0.00757114  normal 
 
 
-
 
NC_008390  Bamb_0653  HAD family hydrolase  29.49 
 
 
225 aa  68.6  0.00000000007  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_4644  HAD-superfamily subfamily IB hydrolase, TIGR01490  27.87 
 
 
286 aa  68.6  0.00000000008  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.460145 
 
 
-
 
NC_014158  Tpau_0665  HAD-superfamily subfamily IB hydrolase, TIGR01490  26.94 
 
 
295 aa  68.6  0.00000000008  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.406953  n/a   
 
 
-
 
NC_002947  PP_1721  HAD superfamily hydrolase  27.15 
 
 
217 aa  68.2  0.0000000001  Pseudomonas putida KT2440  Bacteria  normal  0.566146  normal  0.0514647 
 
 
-
 
NC_007510  Bcep18194_A5502  HAD family hydrolase  27.78 
 
 
268 aa  68.2  0.0000000001  Burkholderia sp. 383  Bacteria  normal  0.806143  normal 
 
 
-
 
NC_007520  Tcr_0999  HAD family hydrolase  22.77 
 
 
218 aa  68.2  0.0000000001  Thiomicrospira crunogena XCL-2  Bacteria  normal  0.0230421  n/a   
 
 
-
 
NC_007777  Francci3_2094  HAD family hydrolase  31.36 
 
 
226 aa  67.8  0.0000000001  Frankia sp. CcI3  Bacteria  normal  0.07906  normal 
 
 
-
 
NC_008576  Mmc1_2929  HAD family hydrolase  26.01 
 
 
221 aa  68.2  0.0000000001  Magnetococcus sp. MC-1  Bacteria  hitchhiker  0.0000000550566  normal 
 
 
-
 
NC_007510  Bcep18194_A3846  HAD family hydrolase  29.06 
 
 
225 aa  67.4  0.0000000002  Burkholderia sp. 383  Bacteria  normal  0.500335  normal 
 
 
-
 
NC_009921  Franean1_6135  HAD family hydrolase  27.15 
 
 
294 aa  67.4  0.0000000002  Frankia sp. EAN1pec  Bacteria  normal  normal  0.415462 
 
 
-
 
NC_008699  Noca_0490  HAD family hydrolase  25.66 
 
 
297 aa  67.4  0.0000000002  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_1870  hypothetical protein  29.6 
 
 
216 aa  67.8  0.0000000002  Pseudomonas aeruginosa PA7  Bacteria  normal  0.531495  n/a   
 
 
-
 
NC_013174  Jden_2226  HAD-superfamily subfamily IB hydrolase, TIGR01490  27.95 
 
 
282 aa  67  0.0000000002  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.98055 
 
 
-
 
NC_013889  TK90_1009  HAD-superfamily subfamily IB hydrolase, TIGR01490  25.38 
 
 
217 aa  67.4  0.0000000002  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.534217 
 
 
-
 
NC_010557  BamMC406_5696  HAD family hydrolase  27.8 
 
 
231 aa  67  0.0000000003  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.0878159 
 
 
-
 
NC_006348  BMA2319  HAD family hydrolase  26.72 
 
 
228 aa  66.6  0.0000000003  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_010508  Bcenmc03_2202  HAD family hydrolase  27.49 
 
 
357 aa  67  0.0000000003  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_3619  1-acyl-sn-glycerol-3-phosphate acyltransferase  26.36 
 
 
561 aa  66.6  0.0000000003  Mycobacterium sp. MCS  Bacteria  hitchhiker  0.00474083  n/a   
 
 
-
 
NC_008346  Swol_2080  phosphoserine phosphatase-like protein  25.43 
 
 
221 aa  66.6  0.0000000003  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  0.642708  n/a   
 
 
-
 
NC_009080  BMA10247_2198  HAD-superfamily subfamily IB hydrolase  26.72 
 
 
228 aa  66.6  0.0000000003  Burkholderia mallei NCTC 10247  Bacteria  normal  0.409073  n/a   
 
 
-
 
NC_008785  BMASAVP1_A0508  HAD-superfamily subfamily IB hydrolase  26.72 
 
 
228 aa  66.6  0.0000000003  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A1091  HAD-superfamily subfamily IB hydrolase  26.72 
 
 
228 aa  66.6  0.0000000003  Burkholderia mallei NCTC 10229  Bacteria  normal  0.494878  n/a   
 
 
-
 
NC_009074  BURPS668_3270  HAD-superfamily subfamily IB hydrolase  26.72 
 
 
228 aa  66.6  0.0000000003  Burkholderia pseudomallei 668  Bacteria  normal  0.487374  n/a   
 
 
-
 
NC_009076  BURPS1106A_3303  HAD-superfamily subfamily IB hydrolase  26.72 
 
 
228 aa  66.6  0.0000000003  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
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