| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_5423 |
|---|
| Symbol | |
|---|
| ID | 4646616 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | + |
|---|
| Start bp | 5803131 |
|---|
| End bp | 5804072 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639808898 |
|---|
| Product | HAD family hydrolase |
|---|
| Protein accession | YP_956199 |
|---|
| Protein GI | 120406370 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0560] Phosphoserine phosphatase |
|---|
| TIGRFAM ID | [TIGR01488] Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like
[TIGR01490] HAD-superfamily subfamily IB hydrolase, TIGR01490 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.988036 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGTCGC AGACAGGTGT CGTGAACTGC CAATTTGTAC AATCTGAGGC TGTCTGTCAC
GCAGCACACG CCTATGCTGA CGATGTGACT TCACCCGACC CGGCGGTCGG GGGTAGCCAG
ACGCCCCCCG CGCCGACTCC GCCGGACCGC CCGATACGTA CCGCAGCCTT CTTCGATCTC
GACAAAACCG TGCTCGCGAA ATCGAGCACA TTAGCTTTCA GCAAACCGTT CTACAGCCAA
GGGCTTATCA ATAGGCGCGC CGTTCTGAAG TCGAGCTATG CACAATTCCT GTTTCTGATG
TCGGGAGCCG ACCACGACCA GATGGATCGG ATGCGCACCT ACATCACCAA CATGTGCACC
GGATGGGACG TCGAACAGAT CAAGGCCATC GTCGGGGAGA CGCTGCACGA CATCGTCGAC
CCGCTGGTGT TCGCCGAGGC CGCGGAACTC ATCGCCGACC ACAAGCTCTG CGGCCGCGAC
GTCGTCGTGG TGTCCGCCTC CGGGGAGGAG ATCGTCGCGC CGATCGCCCG CGCACTCGGC
GCCACCCACG CGATGGCCAC GCGCATGGTG GTCGAGGACG GCAAGTACAC CGGCGACATC
GCCTTCTACT GCTACGGCGA AGGCAAAGCG GAAGCCATTC TGGCGCTTGC CGACCGCGAG
GGTTACGCCC TCGAGCATTG CTACGCCTAC TCCGACTCGA TCACCGACCT GCCGATGCTC
GCGACGGTAG GGCATCCGAC CGTGGTCAAT CCCGACCGGA CGTTGCGCAA GGAGGCCGCC
GCGCGAGGCT GGCCGGTCCG CACGTTCTCC AAGCCGGTAT CACTGCGCGA CCGCTTGCCG
GCCCCGTCCG GAGCCGCCGT CGCGACCACC GCCGCGGTCG GGGTGAGCGC GCTGGCAGCG
GGGGCGCTGA CGTACTCGCT GCTGCGCCGG TTCGCGTTCT GA
|
|---|
| Protein sequence | MQSQTGVVNC QFVQSEAVCH AAHAYADDVT SPDPAVGGSQ TPPAPTPPDR PIRTAAFFDL
DKTVLAKSST LAFSKPFYSQ GLINRRAVLK SSYAQFLFLM SGADHDQMDR MRTYITNMCT
GWDVEQIKAI VGETLHDIVD PLVFAEAAEL IADHKLCGRD VVVVSASGEE IVAPIARALG
ATHAMATRMV VEDGKYTGDI AFYCYGEGKA EAILALADRE GYALEHCYAY SDSITDLPML
ATVGHPTVVN PDRTLRKEAA ARGWPVRTFS KPVSLRDRLP APSGAAVATT AAVGVSALAA
GALTYSLLRR FAF
|
|---|
| |