| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1601 |
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| Symbol | |
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| ID | 3367103 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 1800836 |
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| End bp | 1801489 |
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| Gene Length | 654 bp |
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| Protein Length | 217 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637651944 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_234687 |
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| Protein GI | 66044846 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0560] Phosphoserine phosphatase |
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| TIGRFAM ID | [TIGR01488] Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like
[TIGR01490] HAD-superfamily subfamily IB hydrolase, TIGR01490 |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0403422 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCCTTGG CAATTTTCGA CCTGGACGAA ACCCTGATCG GTGGTGACTG CGCCACGCTC
TGGAGCGAGC AGATGGGTCG CCTGGGCTGG GTTGACTCGA CGTCGTTCAT GCAACGCAAC
GACGAACTGA TGGCCGCCTA CAGCGAGGGC AAGCTCGCGA TGGAAGACTA CATGGCCTTC
AGCCTGGAGC CCATGGCTGG CCGTACCCCC GAAGAAATCG AGCATCTGGT CGGCCCGTGG
GTCGAGGACG TCATCGAACC GATCATCTAC AGCGACGCCT GCACGTGCAT TGCAAAGCAC
CGCGCCAAGG GTGACCGGAT TCTGGTGATC TCGGCTTCGG GCGTGCACCT GGTCAAGCCG
ATCGCCGAAC GCCTTGGCAT CGACGAAGTG CTGGGTATCG AGCTGGACGT GCAGCATGGC
GTCTACAGCG GGGCCACTGT CGGCGTGCTG ACCTATCGGG AAGGCAAGAT CACGCGCCTG
ATGGAGTGGC TGGATGCCGA GGGGGAAAAT CTCGAGGGCG CGAGTTTCTA TTCGGATTCG
CGCAATGACC TGCCGCTGCT GCTCAAGGTT GACCACCCTA ACGTGGTCAA CCCCGATGCC
GTGTTACTGG AACACGCGCG GAAAGCAGGC TGGCCGGTGC ACGACTGGAG CTGA
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| Protein sequence | MPLAIFDLDE TLIGGDCATL WSEQMGRLGW VDSTSFMQRN DELMAAYSEG KLAMEDYMAF
SLEPMAGRTP EEIEHLVGPW VEDVIEPIIY SDACTCIAKH RAKGDRILVI SASGVHLVKP
IAERLGIDEV LGIELDVQHG VYSGATVGVL TYREGKITRL MEWLDAEGEN LEGASFYSDS
RNDLPLLLKV DHPNVVNPDA VLLEHARKAG WPVHDWS
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