| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_3749 |
|---|
| Symbol | |
|---|
| ID | 5368369 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | + |
|---|
| Start bp | 4227263 |
|---|
| End bp | 4227919 |
|---|
| Gene Length | 657 bp |
|---|
| Protein Length | 218 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640806132 |
|---|
| Product | HAD family hydrolase |
|---|
| Protein accession | YP_001342585 |
|---|
| Protein GI | 152997750 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0560] Phosphoserine phosphatase |
|---|
| TIGRFAM ID | [TIGR01488] Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like
[TIGR01490] HAD-superfamily subfamily IB hydrolase, TIGR01490 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.045267 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACACTCG CAATATTTGA CTTAGACGGC ACTTTATTAA ACGGCGACAG TGATTACACT
TGGGGGCAAT TTCTAGTTGA GAAAGGCTTA GTAGACAGCC AAGTCTACAA ACAAGCCAAT
GATAAGTTCT TCGAAGAATA CCAAGCGGGA ACACTAGACA TTCATGAATA TCTAGCATTT
AGCTTAGAAC CGTTAACTAA ATTCTCCAAA GAAGAACTCA GCAAACTGCA CAACACCTTC
ATGCAAGAAA AAGTTCAGCC GATGATGCAG GAAAAAGCCA ACGCTTTATT AAAGCATCAT
AAAGATCAAG GTCATTTTTT GCTCATGATC ACCGCCACCA ATCAGTTTGT TACTGGTCCA
ATTGGCGACG CCTTGGGTAT GGACCATATC ATTGCGCCTG TGCCAGAAAT TATTGATGAT
CACTACACAG GAAAAATCGT TGGCATACCA AGTTTCCAAG CAGGCAAAGT CACACGTCTC
AATGACTGGC TCGCTGAAAC AGGACATTCA ATGGAAGGCA GCTATTTTTA CAGTGACTCA
CGCAATGACT TGCCTTTGTT AGAATTGGTT ACACACCCAA TTGCGGTAGA TGCGGATGAG
ACATTAACCA AAATCGCCCA AGAACGCGGC TGGCAACACA TCTCCCTAAG AGATTAA
|
|---|
| Protein sequence | MTLAIFDLDG TLLNGDSDYT WGQFLVEKGL VDSQVYKQAN DKFFEEYQAG TLDIHEYLAF
SLEPLTKFSK EELSKLHNTF MQEKVQPMMQ EKANALLKHH KDQGHFLLMI TATNQFVTGP
IGDALGMDHI IAPVPEIIDD HYTGKIVGIP SFQAGKVTRL NDWLAETGHS MEGSYFYSDS
RNDLPLLELV THPIAVDADE TLTKIAQERG WQHISLRD
|
|---|
| |