More than 300 homologs were found in PanDaTox collection
for query gene DvMF_0657 on replicon NC_011769
Organism: Desulfovibrio vulgaris str. 'Miyazaki F'



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011769  DvMF_0657  binding-protein-dependent transport systems inner membrane component  100 
 
 
297 aa  598  1e-170  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.235569 
 
 
-
 
NC_008751  Dvul_0223  binding-protein-dependent transport systems inner membrane component  92.39 
 
 
293 aa  543  1e-154  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_5305  binding-protein-dependent transport systems inner membrane component  66.08 
 
 
298 aa  362  6e-99  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.688973 
 
 
-
 
NC_011992  Dtpsy_2658  binding-protein-dependent transport systems inner membrane component  63.21 
 
 
300 aa  352  2.9999999999999997e-96  Acidovorax ebreus TPSY  Bacteria  decreased coverage  0.00312349  n/a   
 
 
-
 
NC_008782  Ajs_3305  binding-protein-dependent transport systems inner membrane component  62.54 
 
 
300 aa  352  5.9999999999999994e-96  Acidovorax sp. JS42  Bacteria  normal  0.980927  normal 
 
 
-
 
NC_008043  TM1040_3215  binding-protein-dependent transport systems inner membrane component  60.42 
 
 
291 aa  342  5e-93  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_2847  binding-protein-dependent transport systems inner membrane component  50.51 
 
 
305 aa  298  7e-80  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.661532 
 
 
-
 
NC_003909  BCE_0630  glycerol-3-phosphate ABC transporter, permease protein, putative  38.93 
 
 
310 aa  194  2e-48  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A0698  putative glycerol-3-phosphate ABC transporter, permease protein  38.93 
 
 
310 aa  194  2e-48  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK0480  glycerol-3-phosphate ABC transporter, permease  38.21 
 
 
310 aa  191  1e-47  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B4735  putative glycerol-3-phosphate ABC transporter, permease protein  38.57 
 
 
310 aa  191  1e-47  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_011773  BCAH820_0623  putative glycerol-3-phosphate ABC transporter, permease protein  38.21 
 
 
310 aa  191  1e-47  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_011725  BCB4264_A0604  putative glycerol-3-phosphate ABC transporter, permease protein  38.21 
 
 
310 aa  191  2e-47  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0481  binding-protein-dependent transport systems inner membrane component  38.21 
 
 
310 aa  190  2e-47  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS0536  glycerol-3-phosphate ABC transporter permease  37.86 
 
 
310 aa  189  5.999999999999999e-47  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0567  glycerol-3-phosphate ABC transporter permease protein  37.86 
 
 
310 aa  189  5.999999999999999e-47  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0478  glycerol-3-phosphate ABC transporter, permease  37.86 
 
 
310 aa  188  8e-47  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_014213  Mesil_3421  binding-protein-dependent transport systems inner membrane component  37.37 
 
 
307 aa  185  9e-46  Meiothermus silvanus DSM 9946  Bacteria  normal  0.556907  normal 
 
 
-
 
NC_014213  Mesil_3227  extracellular solute-binding protein family 1  37.37 
 
 
307 aa  185  9e-46  Meiothermus silvanus DSM 9946  Bacteria  decreased coverage  0.00159401  normal  0.987884 
 
 
-
 
NC_011894  Mnod_6753  binding-protein-dependent transport systems inner membrane component  40.86 
 
 
310 aa  184  2.0000000000000003e-45  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.114113  n/a   
 
 
-
 
NC_012880  Dd703_3266  binding-protein-dependent transport systems inner membrane component  38.3 
 
 
290 aa  183  3e-45  Dickeya dadantii Ech703  Bacteria  normal  0.221371  n/a   
 
 
-
 
NC_013421  Pecwa_0841  binding-protein-dependent transport systems inner membrane component  38.87 
 
 
290 aa  179  2.9999999999999997e-44  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_0627  binding-protein-dependent transport systems inner membrane component  38.52 
 
 
290 aa  179  5.999999999999999e-44  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_1390  binding-protein-dependent transport systems inner membrane component  33.22 
 
 
308 aa  177  1e-43  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_009667  Oant_0639  binding-protein-dependent transport systems inner membrane component  36.55 
 
 
305 aa  177  2e-43  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.371496  n/a   
 
 
-
 
NC_004311  BRA1182  sugar ABC transporter, permease protein, putative  35.11 
 
 
319 aa  174  1.9999999999999998e-42  Brucella suis 1330  Bacteria  normal  0.547049  n/a   
 
 
-
 
NC_009972  Haur_1151  binding-protein-dependent transport systems inner membrane component  36.55 
 
 
314 aa  173  1.9999999999999998e-42  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.59424  n/a   
 
 
-
 
NC_009504  BOV_A1085  putative sugar ABC transporter, permease protein  35.11 
 
 
319 aa  173  2.9999999999999996e-42  Brucella ovis ATCC 25840  Bacteria  normal  0.589946  n/a   
 
 
-
 
NC_009667  Oant_1668  binding-protein-dependent transport systems inner membrane component  35.11 
 
 
310 aa  173  2.9999999999999996e-42  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_6662  binding-protein-dependent transport systems inner membrane component  38.43 
 
 
288 aa  172  5.999999999999999e-42  Methylobacterium sp. 4-46  Bacteria  normal  0.256172  normal  0.0292677 
 
 
-
 
NC_009939  Dgeo_2918  ABC-type sugar transport system, permease component  36.9 
 
 
305 aa  172  5.999999999999999e-42  Deinococcus geothermalis DSM 11300  Bacteria  n/a    n/a   
 
 
-
 
NC_012669  Bcav_3573  binding-protein-dependent transport systems inner membrane component  35.45 
 
 
353 aa  170  3e-41  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.500594  normal 
 
 
-
 
NC_013172  Bfae_29020  carbohydrate ABC transporter membrane protein  36.46 
 
 
275 aa  170  3e-41  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_20620  binding-protein-dependent transport systems inner membrane component  30.53 
 
 
299 aa  169  6e-41  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2292  binding-protein-dependent transport systems inner membrane component  38.11 
 
 
306 aa  168  1e-40  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_011661  Dtur_0382  binding-protein-dependent transport systems inner membrane component  35.22 
 
 
296 aa  168  1e-40  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_3382  binding-protein-dependent transport systems inner membrane component  39.15 
 
 
290 aa  167  2e-40  Dickeya zeae Ech1591  Bacteria  normal  0.514043  n/a   
 
 
-
 
NC_011899  Hore_15550  binding-protein-dependent transport systems inner membrane component  39.04 
 
 
294 aa  167  2.9999999999999998e-40  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_0477  ABC tranporter, permease protein  33.8 
 
 
315 aa  166  4e-40  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_1771  binding-protein-dependent transport systems inner membrane component  37.94 
 
 
307 aa  166  4e-40  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.2153  normal  0.0141948 
 
 
-
 
NC_013205  Aaci_2047  binding-protein-dependent transport systems inner membrane component  34.38 
 
 
294 aa  166  5.9999999999999996e-40  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.550241  n/a   
 
 
-
 
NC_013526  Tter_2208  binding-protein-dependent transport systems inner membrane component  34.57 
 
 
306 aa  165  6.9999999999999995e-40  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.739705  n/a   
 
 
-
 
NC_011886  Achl_3567  binding-protein-dependent transport systems inner membrane component  35.29 
 
 
309 aa  165  6.9999999999999995e-40  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013526  Tter_2523  binding-protein-dependent transport systems inner membrane component  34.97 
 
 
309 aa  165  8e-40  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00000000325465  n/a   
 
 
-
 
NC_013526  Tter_2316  binding-protein-dependent transport systems inner membrane component  33.55 
 
 
313 aa  164  1.0000000000000001e-39  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_002977  MCA1942  sugar ABC transporter, permease protein  38.91 
 
 
287 aa  164  2.0000000000000002e-39  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_2730  binding-protein-dependent transport systems inner membrane component  32.31 
 
 
300 aa  164  2.0000000000000002e-39  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009664  Krad_0295  binding-protein-dependent transport systems inner membrane component  35.67 
 
 
306 aa  163  3e-39  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0472746 
 
 
-
 
NC_011884  Cyan7425_3980  binding-protein-dependent transport systems inner membrane component  34.8 
 
 
299 aa  162  4.0000000000000004e-39  Cyanothece sp. PCC 7425  Bacteria  normal  hitchhiker  0.00655631 
 
 
-
 
NC_013093  Amir_2919  binding-protein-dependent transport systems inner membrane component  35.8 
 
 
310 aa  162  5.0000000000000005e-39  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_2734  binding-protein-dependent transport systems inner membrane component  33.91 
 
 
308 aa  162  5.0000000000000005e-39  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.172129  normal  0.124427 
 
 
-
 
NC_012669  Bcav_0321  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
316 aa  162  7e-39  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_3848  binding-protein-dependent transport systems inner membrane component  32.99 
 
 
320 aa  162  7e-39  Nakamurella multipartita DSM 44233  Bacteria  normal  0.0230008  normal  0.429544 
 
 
-
 
NC_013526  Tter_2000  binding-protein-dependent transport systems inner membrane component  34.62 
 
 
319 aa  162  7e-39  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_1907  binding-protein-dependent transport systems inner membrane component  37.59 
 
 
296 aa  161  1e-38  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.0961638  n/a   
 
 
-
 
NC_012880  Dd703_2034  binding-protein-dependent transport systems inner membrane component  37.23 
 
 
296 aa  160  2e-38  Dickeya dadantii Ech703  Bacteria  normal  0.963086  n/a   
 
 
-
 
NC_009436  Ent638_3289  binding-protein-dependent transport systems inner membrane component  37.59 
 
 
296 aa  160  2e-38  Enterobacter sp. 638  Bacteria  normal  normal  0.243021 
 
 
-
 
NC_009616  Tmel_0691  binding-protein-dependent transport systems inner membrane component  32.96 
 
 
295 aa  160  2e-38  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_2375  binding-protein-dependent transport systems inner membrane component  36.02 
 
 
298 aa  159  4e-38  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_014248  Aazo_4983  binding-protein-dependent transporter inner membrane protein  33.33 
 
 
310 aa  160  4e-38  'Nostoc azollae' 0708  Bacteria  normal  0.300856  n/a   
 
 
-
 
NC_007604  Synpcc7942_0526  ABC-type sugar transport systems permease components-like  35.96 
 
 
293 aa  159  4e-38  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_010184  BcerKBAB4_2801  binding-protein-dependent transport systems inner membrane component  37.56 
 
 
288 aa  159  4e-38  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.254018  n/a   
 
 
-
 
NC_012912  Dd1591_1969  binding-protein-dependent transport systems inner membrane component  37.23 
 
 
296 aa  159  5e-38  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_3807  binding-protein-dependent transport systems inner membrane component  34.98 
 
 
316 aa  159  5e-38  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.922708  normal  0.915782 
 
 
-
 
NC_012034  Athe_0400  binding-protein-dependent transport systems inner membrane component  31.29 
 
 
295 aa  159  5e-38  Anaerocellum thermophilum DSM 6725  Bacteria  unclonable  0.000000000506379  n/a   
 
 
-
 
NC_009708  YpsIP31758_1691  oligogalacturonide ABC tansporter, permease protein  36.84 
 
 
296 aa  159  5e-38  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  0.041328  n/a   
 
 
-
 
NC_010465  YPK_1801  binding-protein-dependent transport systems inner membrane component  36.84 
 
 
296 aa  159  5e-38  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.780468  n/a   
 
 
-
 
NC_013421  Pecwa_2200  binding-protein-dependent transport systems inner membrane component  37.23 
 
 
296 aa  159  5e-38  Pectobacterium wasabiae WPP163  Bacteria  normal  0.467118  n/a   
 
 
-
 
NC_007778  RPB_0176  binding-protein dependent transport system inner membrane protein  34.65 
 
 
314 aa  159  6e-38  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_3149  binding-protein-dependent transport systems inner membrane component  35.04 
 
 
315 aa  159  6e-38  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.0566553  normal  0.330059 
 
 
-
 
NC_009654  Mmwyl1_0774  binding-protein-dependent transport systems inner membrane component  33.94 
 
 
293 aa  159  7e-38  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_008048  Sala_1022  binding-protein-dependent transport systems inner membrane component  35.34 
 
 
294 aa  157  1e-37  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_008262  CPR_0905  transmembrane permease MsmF  34.18 
 
 
289 aa  158  1e-37  Clostridium perfringens SM101  Bacteria  normal  0.0122469  n/a   
 
 
-
 
NC_010320  Teth514_0396  binding-protein-dependent transport systems inner membrane component  36.09 
 
 
307 aa  157  1e-37  Thermoanaerobacter sp. X514  Bacteria  normal  0.701562  n/a   
 
 
-
 
NC_012669  Bcav_3676  binding-protein-dependent transport systems inner membrane component  38.04 
 
 
309 aa  157  1e-37  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_0512  binding-protein-dependent transport systems inner membrane component  32.84 
 
 
318 aa  157  2e-37  Jonesia denitrificans DSM 20603  Bacteria  hitchhiker  0.000000473727  hitchhiker  0.00124128 
 
 
-
 
NC_012850  Rleg_3429  binding-protein-dependent transport systems inner membrane component  36.88 
 
 
307 aa  157  2e-37  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_3982  binding-protein-dependent transport systems inner membrane component  33.93 
 
 
316 aa  157  2e-37  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_009616  Tmel_1015  binding-protein-dependent transport systems inner membrane component  33.71 
 
 
292 aa  157  2e-37  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A2645  oligogalacturonide ABC tansporter, permease  36.47 
 
 
296 aa  157  2e-37  Yersinia pestis Angola  Bacteria  normal  0.952468  normal  0.0439933 
 
 
-
 
NC_013521  Sked_18860  carbohydrate ABC transporter membrane protein  34.91 
 
 
316 aa  157  2e-37  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.346815 
 
 
-
 
NC_013595  Sros_2365  sugar ABC transporter, permease protein  35.27 
 
 
288 aa  156  3e-37  Streptosporangium roseum DSM 43021  Bacteria  normal  0.216835  normal 
 
 
-
 
NC_013595  Sros_8235  ABC transporter, permease protein  33.78 
 
 
306 aa  156  4e-37  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_4634  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
292 aa  156  5.0000000000000005e-37  Nocardioides sp. JS614  Bacteria  normal  0.219562  n/a   
 
 
-
 
NC_009616  Tmel_0752  binding-protein-dependent transport systems inner membrane component  30.9 
 
 
288 aa  155  5.0000000000000005e-37  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_011661  Dtur_0377  binding-protein-dependent transport systems inner membrane component  30.72 
 
 
294 aa  155  5.0000000000000005e-37  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_0830  binding-protein-dependent transport systems inner membrane component  30.93 
 
 
309 aa  155  6e-37  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_012669  Bcav_3792  binding-protein-dependent transport systems inner membrane component  32.38 
 
 
285 aa  155  7e-37  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.168129  normal 
 
 
-
 
NC_011004  Rpal_0131  binding-protein-dependent transport systems inner membrane component  36.08 
 
 
319 aa  155  1e-36  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.128042  n/a   
 
 
-
 
NC_011981  Avi_7347  ABC transporter membrane spanning protein (sugar)  32.63 
 
 
320 aa  154  1e-36  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2041  binding-protein-dependent transport systems inner membrane component  31.77 
 
 
305 aa  154  2e-36  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00457854  n/a   
 
 
-
 
NC_011368  Rleg2_5336  binding-protein-dependent transport systems inner membrane component  32.98 
 
 
318 aa  154  2e-36  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.949955  normal 
 
 
-
 
NC_012669  Bcav_1506  binding-protein-dependent transport systems inner membrane component  35.94 
 
 
319 aa  154  2e-36  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.172357  normal 
 
 
-
 
NC_014210  Ndas_0753  binding-protein-dependent transport systems inner membrane component  34.87 
 
 
312 aa  154  2e-36  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.308461  normal 
 
 
-
 
NC_013721  HMPREF0424_1290  ABC transporter, permease protein  29.81 
 
 
311 aa  153  2.9999999999999998e-36  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_009429  Rsph17025_3551  binding-protein-dependent transport systems inner membrane component  36.07 
 
 
301 aa  153  2.9999999999999998e-36  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.963791  normal 
 
 
-
 
NC_011898  Ccel_1134  binding-protein-dependent transport systems inner membrane component  33.71 
 
 
300 aa  153  4e-36  Clostridium cellulolyticum H10  Bacteria  normal  0.454536  n/a   
 
 
-
 
NC_013411  GYMC61_2847  binding-protein-dependent transport systems inner membrane component  34.9 
 
 
318 aa  152  4e-36  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_012848  Rleg_5053  binding-protein-dependent transport systems inner membrane component  32.98 
 
 
318 aa  153  4e-36  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.0625824  normal 
 
 
-
 
NC_007413  Ava_0461  binding-protein dependent transport system inner membrane protein  33.7 
 
 
301 aa  152  5.9999999999999996e-36  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.0667876 
 
 
-
 
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