216 homologs were found in PanDaTox collection
for query gene Cla_0945 on replicon NC_012039
Organism: Campylobacter lari RM2100



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012039  Cla_0945  Holliday junction resolvase-like protein  100 
 
 
128 aa  258  2e-68  Campylobacter lari RM2100  Bacteria  normal  0.854613  n/a   
 
 
-
 
NC_009707  JJD26997_1364  Holliday junction resolvase-like protein  64 
 
 
129 aa  178  2e-44  Campylobacter jejuni subsp. doylei 269.97  Bacteria  normal  0.451878  n/a   
 
 
-
 
NC_003912  CJE0738  Holliday junction resolvase-like protein  60.63 
 
 
127 aa  174  3e-43  Campylobacter jejuni RM1221  Bacteria  normal  0.53595  n/a   
 
 
-
 
NC_008787  CJJ81176_0663  Holliday junction resolvase-like protein  60.63 
 
 
127 aa  173  8e-43  Campylobacter jejuni subsp. jejuni 81-176  Bacteria  normal  0.907248  n/a   
 
 
-
 
NC_009714  CHAB381_0377  Holliday junction resolvase-like protein  58.06 
 
 
127 aa  145  2.0000000000000003e-34  Campylobacter hominis ATCC BAA-381  Bacteria  normal  n/a   
 
 
-
 
NC_009715  CCV52592_1578  Holliday junction resolvase-like protein  53.54 
 
 
127 aa  138  3e-32  Campylobacter curvus 525.92  Bacteria  normal  n/a   
 
 
-
 
NC_013512  Sdel_0873  Holliday junction resolvase YqgF  52 
 
 
135 aa  133  7.000000000000001e-31  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  0.0928843  n/a   
 
 
-
 
NC_007575  Suden_0527  Holliday junction resolvase-like protein  49.6 
 
 
130 aa  132  1.9999999999999998e-30  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_008599  CFF8240_1124  Holliday junction resolvase-like protein  50.81 
 
 
124 aa  130  3.9999999999999996e-30  Campylobacter fetus subsp. fetus 82-40  Bacteria  normal  0.0662125  n/a   
 
 
-
 
NC_009523  RoseRS_3225  Holliday junction resolvase YqgF  33.08 
 
 
141 aa  70.9  0.000000000005  Roseiflexus sp. RS-1  Bacteria  normal  0.387387  normal 
 
 
-
 
NC_009767  Rcas_3713  Holliday junction resolvase YqgF  34.35 
 
 
146 aa  70.1  0.000000000009  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.0658941  hitchhiker  0.00476179 
 
 
-
 
NC_013522  Taci_1032  Holliday junction resolvase YqgF  36.36 
 
 
142 aa  60.5  0.000000007  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_2580  Holliday junction resolvase-like protein  33.59 
 
 
145 aa  59.7  0.00000001  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal  0.0863234 
 
 
-
 
NC_010730  SYO3AOP1_0474  Holliday junction resolvase YqgF  36.15 
 
 
145 aa  58.5  0.00000003  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  hitchhiker  0.00800439  n/a   
 
 
-
 
NC_013223  Dret_1130  Holliday junction resolvase YqgF  31.82 
 
 
142 aa  58.5  0.00000003  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_013205  Aaci_2024  Holliday junction resolvase YqgF  32.81 
 
 
144 aa  57.4  0.00000006  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.330713  n/a   
 
 
-
 
NC_011831  Cagg_0094  Holliday junction resolvase YqgF  31.3 
 
 
142 aa  56.6  0.0000001  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.0018567  normal 
 
 
-
 
NC_011025  MARTH_orf203  putative Holliday junction resolvase  34.31 
 
 
147 aa  57  0.0000001  Mycoplasma arthritidis 158L3-1  Bacteria  normal  n/a   
 
 
-
 
NC_010622  Bphy_2326  Holliday junction resolvase-like protein  34.13 
 
 
151 aa  55.8  0.0000002  Burkholderia phymatum STM815  Bacteria  normal  normal  0.0635951 
 
 
-
 
NC_011901  Tgr7_2911  Holliday junction resolvase YqgF  29.1 
 
 
163 aa  55.1  0.0000003  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.816073  n/a   
 
 
-
 
NC_008009  Acid345_0556  Holliday junction resolvase YqgF  30.77 
 
 
153 aa  54.7  0.0000004  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.901255  normal  0.0480752 
 
 
-
 
NC_007614  Nmul_A2479  Holliday junction resolvase-like protein  30.23 
 
 
151 aa  53.1  0.000001  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_011661  Dtur_1024  Holliday junction resolvase YqgF  31.3 
 
 
141 aa  52.8  0.000001  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_007951  Bxe_A3810  Holliday junction resolvase-like protein  33.33 
 
 
146 aa  52.8  0.000001  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_0540  Holliday junction resolvase YqgF  31.3 
 
 
156 aa  53.1  0.000001  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_003909  BCE_4469  Holliday junction resolvase-like protein  31.85 
 
 
137 aa  52  0.000003  Bacillus cereus ATCC 10987  Bacteria  decreased coverage  0.000000240455  n/a   
 
 
-
 
NC_004347  SO_3347  Holliday junction resolvase-like protein  30.77 
 
 
141 aa  52  0.000003  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_005945  BAS4282  Holliday junction resolvase-like protein  31.85 
 
 
137 aa  52  0.000003  Bacillus anthracis str. Sterne  Bacteria  hitchhiker  0.000000036093  n/a   
 
 
-
 
NC_005957  BT9727_4119  Holliday junction resolvase-like protein  31.85 
 
 
137 aa  52  0.000003  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  decreased coverage  3.61572e-18  n/a   
 
 
-
 
NC_006274  BCZK4130  Holliday junction resolvase-like protein  31.85 
 
 
137 aa  52  0.000003  Bacillus cereus E33L  Bacteria  unclonable  0.000000000000238321  n/a   
 
 
-
 
NC_011899  Hore_05800  Holliday junction resolvase YqgF  31.11 
 
 
140 aa  51.6  0.000003  Halothermothrix orenii H 168  Bacteria  normal  0.209228  n/a   
 
 
-
 
NC_007530  GBAA_4614  Holliday junction resolvase-like protein  31.85 
 
 
137 aa  52  0.000003  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  decreased coverage  0.0000000000846091  n/a   
 
 
-
 
NC_007912  Sde_3638  Holliday junction resolvase-like protein  30.53 
 
 
142 aa  52  0.000003  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_011658  BCAH187_A4519  Holliday junction resolvase-like protein  31.85 
 
 
137 aa  52  0.000003  Bacillus cereus AH187  Bacteria  hitchhiker  0.000203205  n/a   
 
 
-
 
NC_011773  BCAH820_4466  Holliday junction resolvase-like protein  31.85 
 
 
137 aa  52  0.000003  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.0000283196 
 
 
-
 
NC_013501  Rmar_0873  Holliday junction resolvase YqgF  30.6 
 
 
145 aa  51.2  0.000004  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_008816  A9601_08551  endonuclease  30.08 
 
 
153 aa  51.2  0.000004  Prochlorococcus marinus str. AS9601  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_3633  Holliday junction resolvase YqgF  31.3 
 
 
158 aa  51.2  0.000005  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_3804  Holliday junction resolvase-like protein  30.3 
 
 
151 aa  50.8  0.000006  Anabaena variabilis ATCC 29413  Bacteria  normal  0.0796335  normal 
 
 
-
 
NC_003295  RSc0676  Holliday junction resolvase-like protein  33.07 
 
 
144 aa  50.8  0.000007  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_009091  P9301_08521  endonuclease  30.08 
 
 
153 aa  50.4  0.000007  Prochlorococcus marinus str. MIT 9301  Bacteria  normal  0.329669  n/a   
 
 
-
 
NC_011353  ECH74115_4252  Holliday junction resolvase-like protein  30.53 
 
 
138 aa  50.8  0.000007  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.367892  normal  0.370097 
 
 
-
 
CP001509  ECD_02779  Holliday junction resolvase-like protein  30.53 
 
 
138 aa  50.4  0.000008  Escherichia coli BL21(DE3)  Bacteria  normal  0.358182  n/a   
 
 
-
 
CP001637  EcDH1_0746  Holliday junction resolvase YqgF  30.53 
 
 
138 aa  50.4  0.000008  Escherichia coli DH1  Bacteria  normal  0.61838  n/a   
 
 
-
 
NC_010658  SbBS512_E3381  Holliday junction resolvase-like protein  30.53 
 
 
138 aa  50.4  0.000008  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_0765  Holliday junction resolvase-like protein  30.53 
 
 
138 aa  50.4  0.000008  Escherichia coli ATCC 8739  Bacteria  normal  0.809741  hitchhiker  0.0000191582 
 
 
-
 
NC_008048  Sala_0925  Holliday junction resolvase YqgF  33.06 
 
 
152 aa  50.4  0.000008  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.233016  normal 
 
 
-
 
NC_012892  B21_02742  hypothetical protein  30.53 
 
 
138 aa  50.4  0.000008  Escherichia coli BL21  Bacteria  normal  0.395069  n/a   
 
 
-
 
NC_009800  EcHS_A3107  Holliday junction resolvase-like protein  30.53 
 
 
138 aa  50.4  0.000008  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_013161  Cyan8802_1969  Holliday junction resolvase-like protein  30 
 
 
139 aa  50.4  0.000008  Cyanothece sp. PCC 8802  Bacteria  normal  normal  0.0212683 
 
 
-
 
NC_011726  PCC8801_1942  Holliday junction resolvase-like protein  30 
 
 
139 aa  50.4  0.000008  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_009801  EcE24377A_3292  Holliday junction resolvase-like protein  30.53 
 
 
138 aa  50.4  0.000008  Escherichia coli E24377A  Bacteria  normal  0.684819  n/a   
 
 
-
 
NC_010498  EcSMS35_3091  Holliday junction resolvase-like protein  30.53 
 
 
138 aa  50.4  0.000008  Escherichia coli SMS-3-5  Bacteria  normal  0.372008  decreased coverage  0.00000514809 
 
 
-
 
NC_010682  Rpic_0620  Holliday junction resolvase-like protein  33.86 
 
 
143 aa  50.4  0.000008  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_010320  Teth514_1491  Holliday junction resolvase-like protein  28.15 
 
 
139 aa  50.4  0.000009  Thermoanaerobacter sp. X514  Bacteria  unclonable  0.0000000000748947  n/a   
 
 
-
 
NC_007954  Sden_2673  Holliday junction resolvase-like protein  31.06 
 
 
141 aa  50.4  0.000009  Shewanella denitrificans OS217  Bacteria  hitchhiker  0.0000201914  n/a   
 
 
-
 
NC_011126  HY04AAS1_0205  Holliday junction resolvase YqgF  29.6 
 
 
123 aa  49.7  0.00001  Hydrogenobaculum sp. Y04AAS1  Bacteria  normal  n/a   
 
 
-
 
NC_012856  Rpic12D_0568  Holliday junction resolvase-like protein  33.07 
 
 
143 aa  49.7  0.00001  Ralstonia pickettii 12D  Bacteria  normal  0.619752  normal 
 
 
-
 
NC_013730  Slin_5430  Holliday junction resolvase YqgF  31.62 
 
 
142 aa  50.1  0.00001  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_008709  Ping_1285  Holliday junction resolvase YqgF  32.31 
 
 
145 aa  49.7  0.00001  Psychromonas ingrahamii 37  Bacteria  normal  0.0394867  normal 
 
 
-
 
NC_013517  Sterm_2739  Holliday junction resolvase YqgF  32.84 
 
 
137 aa  48.9  0.00002  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I1463  Holliday junction resolvase-like protein  33.6 
 
 
146 aa  49.3  0.00002  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_0869  Holliday junction resolvase-like protein  33.08 
 
 
146 aa  48.9  0.00002  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.0747835 
 
 
-
 
NC_008321  Shewmr4_1198  Holliday junction resolvase-like protein  30 
 
 
141 aa  49.3  0.00002  Shewanella sp. MR-4  Bacteria  hitchhiker  0.000276178  normal 
 
 
-
 
NC_008322  Shewmr7_1269  Holliday junction resolvase-like protein  30 
 
 
141 aa  49.3  0.00002  Shewanella sp. MR-7  Bacteria  hitchhiker  0.000329275  normal 
 
 
-
 
NC_008530  LGAS_0423  Holliday junction resolvase-like protein  29.5 
 
 
143 aa  48.9  0.00002  Lactobacillus gasseri ATCC 33323  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_1199  Holliday junction resolvase-like protein  30 
 
 
141 aa  49.3  0.00002  Shewanella sp. ANA-3  Bacteria  normal  0.0107111  normal  0.529497 
 
 
-
 
NC_013165  Shel_07810  conserved hypothetical protein TIGR00250  29.85 
 
 
138 aa  49.3  0.00002  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal  0.0182311 
 
 
-
 
NC_010830  Aasi_1327  Holliday junction resolvase-like protein  31.62 
 
 
141 aa  48.9  0.00002  Candidatus Amoebophilus asiaticus 5a2  Bacteria  n/a    normal  0.513618 
 
 
-
 
NC_012791  Vapar_4616  Holliday junction resolvase-like protein  32.26 
 
 
153 aa  49.3  0.00002  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_3892  Holliday junction resolvase-like protein  32.84 
 
 
146 aa  48.5  0.00003  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_011138  MADE_03294  Holliday junction resolvase-like protein  31.78 
 
 
143 aa  48.5  0.00003  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.659098  n/a   
 
 
-
 
NC_013204  Elen_2554  Holliday junction resolvase YqgF  28.36 
 
 
138 aa  48.5  0.00003  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_010084  Bmul_2523  Holliday junction resolvase-like protein  34.35 
 
 
149 aa  48.5  0.00003  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.159244 
 
 
-
 
NC_009675  Anae109_2535  Holliday junction resolvase-like protein  29.1 
 
 
137 aa  48.5  0.00003  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.52249 
 
 
-
 
NC_014148  Plim_0102  Holliday junction resolvase YqgF  33.33 
 
 
199 aa  48.5  0.00003  Planctomyces limnophilus DSM 3776  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_1211  Holliday junction resolvase YqgF  30.15 
 
 
138 aa  48.5  0.00003  Anaerocellum thermophilum DSM 6725  Bacteria  normal  0.271637  n/a   
 
 
-
 
NC_010184  BcerKBAB4_4233  Holliday junction resolvase-like protein  30.37 
 
 
137 aa  48.1  0.00004  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.000272031  n/a   
 
 
-
 
NC_011725  BCB4264_A4506  Holliday junction resolvase-like protein  30.37 
 
 
137 aa  48.1  0.00004  Bacillus cereus B4264  Bacteria  normal  0.860088  n/a   
 
 
-
 
NC_011772  BCG9842_B0730  Holliday junction resolvase-like protein  30.37 
 
 
137 aa  48.1  0.00004  Bacillus cereus G9842  Bacteria  decreased coverage  0.0000000542239  normal 
 
 
-
 
NC_006348  BMA1996  Holliday junction resolvase-like protein  33.59 
 
 
146 aa  47.8  0.00005  Burkholderia mallei ATCC 23344  Bacteria  normal  0.391575  n/a   
 
 
-
 
NC_007434  BURPS1710b_3169  Holliday junction resolvase-like protein  33.59 
 
 
146 aa  47.8  0.00005  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A0917  Holliday junction resolvase-like protein  33.59 
 
 
146 aa  47.8  0.00005  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A2747  Holliday junction resolvase-like protein  33.59 
 
 
146 aa  47.8  0.00005  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_3147  Holliday junction resolvase-like protein  33.59 
 
 
146 aa  47.8  0.00005  Burkholderia pseudomallei 1106a  Bacteria  normal  0.822464  n/a   
 
 
-
 
NC_009080  BMA10247_1858  Holliday junction resolvase-like protein  33.59 
 
 
146 aa  47.8  0.00005  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_013515  Smon_0417  Holliday junction resolvase YqgF  29.01 
 
 
142 aa  47.4  0.00006  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_007963  Csal_0059  Holliday junction resolvase-like protein  29.55 
 
 
148 aa  47.4  0.00006  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_3111  Holliday junction resolvase-like protein  33.59 
 
 
146 aa  47.4  0.00006  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_007799  ECH_0460  hypothetical protein  28.12 
 
 
156 aa  47.4  0.00007  Ehrlichia chaffeensis str. Arkansas  Bacteria  normal  n/a   
 
 
-
 
NC_007520  Tcr_1828  Holliday junction resolvase YqgF  25.6 
 
 
134 aa  47.4  0.00008  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_2849  Holliday junction resolvase-like protein  29.01 
 
 
139 aa  47  0.00008  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_007577  PMT9312_0799  Holliday junction resolvase YqgF  27.61 
 
 
153 aa  47  0.00009  Prochlorococcus marinus str. MIT 9312  Bacteria  normal  0.957254  n/a   
 
 
-
 
NC_007604  Synpcc7942_2398  Holliday junction resolvase-like protein  30.77 
 
 
149 aa  47  0.00009  Synechococcus elongatus PCC 7942  Bacteria  normal  0.0366153  hitchhiker  0.00151496 
 
 
-
 
NC_009092  Shew_1143  Holliday junction resolvase-like protein  27.69 
 
 
139 aa  47  0.00009  Shewanella loihica PV-4  Bacteria  normal  0.997205  normal  0.0325702 
 
 
-
 
NC_011083  SeHA_C3336  Holliday junction resolvase-like protein  29.23 
 
 
138 aa  46.6  0.0001  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal  0.392173 
 
 
-
 
NC_007519  Dde_0314  Holliday junction resolvase YqgF  28.15 
 
 
144 aa  46.6  0.0001  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_011094  SeSA_A3271  Holliday junction resolvase-like protein  29.23 
 
 
138 aa  46.6  0.0001  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal  0.0744312 
 
 
-
 
NC_008312  Tery_4379  Holliday junction resolvase-like protein  29.32 
 
 
149 aa  46.6  0.0001  Trichodesmium erythraeum IMS101  Bacteria  normal  0.556882  normal  0.251804 
 
 
-
 
NC_009511  Swit_0601  Holliday junction resolvase YqgF  32.26 
 
 
151 aa  47  0.0001  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.613999 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>