Gene PMT9312_0799 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_0799 
Symbol 
ID3765599 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand- 
Start bp744077 
End bp744538 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content32% 
IMG OID637797320 
ProductHolliday junction resolvase YqgF 
Protein accessionYP_397295 
Protein GI78779183 
COG category[L] Replication, recombination and repair 
COG ID[COG0816] Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) 
TIGRFAM ID[TIGR00250] RNAse H-fold protein YqgF 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.957254 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAATTTT ATAAACCTAA ACCCAGGTCA ATTTTAAGCT TCGATGTAGG AATCAAAAGA 
ATAGGATTGG CTTATTGTGA TCCACTATGC ATAACATCAA ATATACTCCC AGCAGTAAAG 
AGGGTTGAAG ATAATAAAGA GCTTAAAATC ATTAGAAATC ATATAAAAAA ATTTAATTTG 
ACTGGTTTTA TTGTTGGGCT TCCGCTTGAT GAGAAAGGTA AAATGACCCC TCAGGCTATT 
GACTGTATGA ATTACGGTCA ATTACTTTCA AATGAATTAA AGCTTCCATT TTCTTACGTC 
AACGAACATA GTTCAACATG GGAATCTTCA AATAGATTTG GAATTAAAAA AGATAAATCT 
GGATTGATTG ATAGTTTTGC AGCAAAAGTA ATACTTGAAC AATGGATAAA AGAAGGTCCT 
GAATTAGAAG AATTAGCTGG TAAAGGTCAG ATAAAATATT AG
 
Protein sequence
MKFYKPKPRS ILSFDVGIKR IGLAYCDPLC ITSNILPAVK RVEDNKELKI IRNHIKKFNL 
TGFIVGLPLD EKGKMTPQAI DCMNYGQLLS NELKLPFSYV NEHSSTWESS NRFGIKKDKS 
GLIDSFAAKV ILEQWIKEGP ELEELAGKGQ IKY