More than 300 homologs were found in PanDaTox collection
for query gene Caci_4455 on replicon NC_013131
Organism: Catenulispora acidiphila DSM 44928



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013131  Caci_4455  two component transcriptional regulator, LuxR family  100 
 
 
213 aa  411  1e-114  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_7246  two component LuxR family transcriptional regulator  64.15 
 
 
215 aa  265  2.9999999999999995e-70  Frankia sp. EAN1pec  Bacteria  normal  normal  0.172833 
 
 
-
 
NC_013739  Cwoe_3908  two component transcriptional regulator, LuxR family  64.32 
 
 
214 aa  263  2e-69  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_0948  two component transcriptional regulator, LuxR family  63.51 
 
 
214 aa  259  2e-68  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_4416  response regulator receiver protein  67.45 
 
 
228 aa  258  3e-68  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.0335955 
 
 
-
 
NC_013510  Tcur_4729  two component transcriptional regulator, LuxR family  62.56 
 
 
212 aa  256  2e-67  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_0353  two component LuxR family transcriptional regulator  64.15 
 
 
213 aa  255  3e-67  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_0423  two component LuxR family transcriptional regulator  63.21 
 
 
213 aa  250  9.000000000000001e-66  Salinispora arenicola CNS-205  Bacteria  normal  0.450903  hitchhiker  0.0058743 
 
 
-
 
NC_013595  Sros_2506  response regulator receiver protein  58.88 
 
 
223 aa  249  2e-65  Streptosporangium roseum DSM 43021  Bacteria  normal  0.189025  normal  0.663488 
 
 
-
 
NC_013510  Tcur_3933  two component transcriptional regulator, LuxR family  63.08 
 
 
218 aa  248  3e-65  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_0636  two component transcriptional regulator, LuxR family  59.81 
 
 
214 aa  248  6e-65  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.583432 
 
 
-
 
NC_013595  Sros_1653  response regulator receiver protein  61.79 
 
 
220 aa  246  2e-64  Streptosporangium roseum DSM 43021  Bacteria  normal  0.799733  normal 
 
 
-
 
NC_014165  Tbis_3545  LuxR family two component transcriptional regulator  61.61 
 
 
213 aa  245  3e-64  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.701363 
 
 
-
 
NC_014210  Ndas_1960  two component transcriptional regulator, LuxR family  61.97 
 
 
215 aa  246  3e-64  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  0.0000000329107  hitchhiker  0.00000396613 
 
 
-
 
NC_013947  Snas_5645  two component transcriptional regulator, LuxR family  58.29 
 
 
215 aa  244  8e-64  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.117498 
 
 
-
 
NC_013739  Cwoe_3717  two component transcriptional regulator, LuxR family  59.81 
 
 
217 aa  240  9e-63  Conexibacter woesei DSM 14684  Bacteria  normal  0.82478  normal 
 
 
-
 
NC_013131  Caci_1254  two component transcriptional regulator, LuxR family  58.69 
 
 
213 aa  239  2e-62  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_0307  two component transcriptional regulator, LuxR family  64.32 
 
 
214 aa  238  5e-62  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.115356  normal  0.300779 
 
 
-
 
NC_013093  Amir_2699  two component transcriptional regulator, LuxR family  57.75 
 
 
226 aa  238  5.999999999999999e-62  Actinosynnema mirum DSM 43827  Bacteria  hitchhiker  0.000000630711  n/a   
 
 
-
 
NC_013235  Namu_2928  two component transcriptional regulator, LuxR family  57.48 
 
 
243 aa  236  2e-61  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.000012449  hitchhiker  0.0000084288 
 
 
-
 
NC_013131  Caci_1917  two component transcriptional regulator, LuxR family  57.67 
 
 
215 aa  235  4e-61  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_2250  two component transcriptional regulator, LuxR family  58.22 
 
 
217 aa  234  5.0000000000000005e-61  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.137071 
 
 
-
 
NC_013093  Amir_2757  two component transcriptional regulator, LuxR family  63.55 
 
 
214 aa  234  6e-61  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0593961  n/a   
 
 
-
 
NC_013595  Sros_6137  response regulator receiver protein  60 
 
 
209 aa  234  6e-61  Streptosporangium roseum DSM 43021  Bacteria  normal  0.633642  normal  0.13111 
 
 
-
 
NC_009380  Strop_2758  response regulator receiver  55.61 
 
 
220 aa  234  7e-61  Salinispora tropica CNB-440  Bacteria  normal  0.21835  normal  0.0217102 
 
 
-
 
NC_013947  Snas_4725  two component transcriptional regulator, LuxR family  61.97 
 
 
218 aa  233  2.0000000000000002e-60  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.37253  normal 
 
 
-
 
NC_013595  Sros_9330  response regulator receiver protein  60.28 
 
 
221 aa  231  6e-60  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.603744 
 
 
-
 
NC_013595  Sros_6197  response regulator receiver protein  57.21 
 
 
215 aa  227  1e-58  Streptosporangium roseum DSM 43021  Bacteria  normal  0.376562  normal 
 
 
-
 
NC_013595  Sros_2300  response regulator receiver protein  59.91 
 
 
213 aa  226  2e-58  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_0198  two component transcriptional regulator, LuxR family  57.55 
 
 
218 aa  225  4e-58  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_12650  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  56.07 
 
 
217 aa  224  8e-58  Brachybacterium faecium DSM 4810  Bacteria  normal  0.129544  n/a   
 
 
-
 
NC_009921  Franean1_4332  two component LuxR family transcriptional regulator  60.56 
 
 
225 aa  223  1e-57  Frankia sp. EAN1pec  Bacteria  decreased coverage  0.00650273  normal 
 
 
-
 
NC_013739  Cwoe_3762  two component transcriptional regulator, LuxR family  58.9 
 
 
221 aa  223  2e-57  Conexibacter woesei DSM 14684  Bacteria  normal  0.355338  normal  0.813095 
 
 
-
 
NC_013235  Namu_3862  two component transcriptional regulator, LuxR family  58.02 
 
 
213 aa  223  2e-57  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00236143  normal 
 
 
-
 
NC_008726  Mvan_0263  two component LuxR family transcriptional regulator  55.66 
 
 
214 aa  221  4.9999999999999996e-57  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.103764 
 
 
-
 
NC_009664  Krad_1992  two component transcriptional regulator, LuxR family  56.48 
 
 
218 aa  221  6e-57  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_3915  two component transcriptional regulator, LuxR family  57.75 
 
 
226 aa  219  1.9999999999999999e-56  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.161295  normal  0.0598624 
 
 
-
 
NC_013131  Caci_0610  two component transcriptional regulator, LuxR family  53.95 
 
 
215 aa  218  7e-56  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.440854 
 
 
-
 
NC_009338  Mflv_2280  two component LuxR family transcriptional regulator  56.07 
 
 
214 aa  218  7e-56  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.92337  normal  0.457915 
 
 
-
 
NC_013595  Sros_4051  response regulator receiver protein  54.25 
 
 
214 aa  217  1e-55  Streptosporangium roseum DSM 43021  Bacteria  normal  hitchhiker  0.004601 
 
 
-
 
NC_008705  Mkms_3983  two component LuxR family transcriptional regulator  56.07 
 
 
214 aa  215  4e-55  Mycobacterium sp. KMS  Bacteria  normal  0.714996  normal 
 
 
-
 
NC_009077  Mjls_3924  two component LuxR family transcriptional regulator  56.07 
 
 
214 aa  215  4e-55  Mycobacterium sp. JLS  Bacteria  normal  normal  0.278782 
 
 
-
 
NC_014210  Ndas_2133  two component transcriptional regulator, LuxR family  58.96 
 
 
214 aa  214  9e-55  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_2641  two component transcriptional regulator, LuxR family  56.68 
 
 
220 aa  213  1.9999999999999998e-54  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.53526  normal 
 
 
-
 
NC_009664  Krad_3331  two component transcriptional regulator, LuxR family  57.62 
 
 
216 aa  212  2.9999999999999995e-54  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0226882  normal  0.21338 
 
 
-
 
NC_009921  Franean1_2299  two component LuxR family transcriptional regulator  56.4 
 
 
242 aa  211  4.9999999999999996e-54  Frankia sp. EAN1pec  Bacteria  normal  0.0379402  normal 
 
 
-
 
NC_014210  Ndas_2432  two component transcriptional regulator, LuxR family  55.77 
 
 
233 aa  211  5.999999999999999e-54  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.199835  normal  0.129248 
 
 
-
 
NC_013131  Caci_0203  two component transcriptional regulator, LuxR family  53.59 
 
 
218 aa  211  7.999999999999999e-54  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_4605  two component transcriptional regulator, LuxR family  58.02 
 
 
222 aa  209  2e-53  Conexibacter woesei DSM 14684  Bacteria  normal  0.554224  normal 
 
 
-
 
NC_008146  Mmcs_3909  two component LuxR family transcriptional regulator  55.45 
 
 
211 aa  209  3e-53  Mycobacterium sp. MCS  Bacteria  normal  0.755905  n/a   
 
 
-
 
NC_014210  Ndas_3517  two component transcriptional regulator, LuxR family  52.34 
 
 
214 aa  207  9e-53  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.498529  normal 
 
 
-
 
NC_013235  Namu_0810  two component transcriptional regulator, LuxR family  51.85 
 
 
219 aa  207  1e-52  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_4386  two component LuxR family transcriptional regulator  54.5 
 
 
209 aa  205  4e-52  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_013169  Ksed_17580  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  54.07 
 
 
211 aa  204  8e-52  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.0315732  normal  0.450672 
 
 
-
 
NC_013172  Bfae_11890  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  53.08 
 
 
213 aa  204  9e-52  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_4661  two component transcriptional regulator, LuxR family  54.25 
 
 
220 aa  203  2e-51  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_8722  response regulator receiver protein  50.95 
 
 
210 aa  202  3e-51  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_0330  LuxR response regulator receiver  52.56 
 
 
219 aa  202  3e-51  Thermobifida fusca YX  Bacteria  normal  0.673991  n/a   
 
 
-
 
NC_013947  Snas_2341  two component transcriptional regulator, LuxR family  51.16 
 
 
215 aa  202  3e-51  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_2092  two component transcriptional regulator, LuxR family  52.09 
 
 
216 aa  202  4e-51  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_0212  two component transcriptional regulator, LuxR family  55.66 
 
 
218 aa  201  5e-51  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_0530  two component transcriptional regulator, LuxR family  53.99 
 
 
214 aa  201  9e-51  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0201422  n/a   
 
 
-
 
NC_013757  Gobs_2541  two component transcriptional regulator, LuxR family  48.37 
 
 
215 aa  201  9e-51  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.92112  n/a   
 
 
-
 
NC_012669  Bcav_1359  two component transcriptional regulator, LuxR family  52.75 
 
 
219 aa  200  1.9999999999999998e-50  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.323671 
 
 
-
 
NC_013739  Cwoe_0320  two component transcriptional regulator, LuxR family  51.87 
 
 
218 aa  197  7.999999999999999e-50  Conexibacter woesei DSM 14684  Bacteria  normal  0.308686  normal  0.0930841 
 
 
-
 
NC_014158  Tpau_0972  two component transcriptional regulator, LuxR family  52.15 
 
 
208 aa  194  6e-49  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_3103  two component transcriptional regulator, LuxR family  56.22 
 
 
223 aa  194  9e-49  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.156187  hitchhiker  0.000316121 
 
 
-
 
NC_013521  Sked_09230  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  52.29 
 
 
218 aa  194  1e-48  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.310613 
 
 
-
 
NC_013093  Amir_4689  two component transcriptional regulator, LuxR family  58.6 
 
 
216 aa  192  3e-48  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_2389  two component transcriptional regulator, LuxR family  49.77 
 
 
215 aa  191  6e-48  Conexibacter woesei DSM 14684  Bacteria  normal  0.205007  decreased coverage  0.00115827 
 
 
-
 
NC_009664  Krad_4020  two component transcriptional regulator, LuxR family  58.55 
 
 
215 aa  190  1e-47  Kineococcus radiotolerans SRS30216  Bacteria  hitchhiker  0.000894251  normal  0.0789775 
 
 
-
 
NC_013739  Cwoe_3050  two component transcriptional regulator, LuxR family  48.58 
 
 
214 aa  187  8e-47  Conexibacter woesei DSM 14684  Bacteria  normal  0.127757  normal 
 
 
-
 
NC_013739  Cwoe_5165  two component transcriptional regulator, LuxR family  48.83 
 
 
214 aa  187  1e-46  Conexibacter woesei DSM 14684  Bacteria  normal  0.852017  normal 
 
 
-
 
NC_013530  Xcel_0244  two component transcriptional regulator, LuxR family  48.11 
 
 
216 aa  186  2e-46  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_0968  two component LuxR family transcriptional regulator  48.85 
 
 
220 aa  186  2e-46  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_5906  two component LuxR family transcriptional regulator  49.77 
 
 
228 aa  186  3e-46  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.363446  normal 
 
 
-
 
NC_013595  Sros_3199  response regulator receiver protein  53.55 
 
 
212 aa  186  3e-46  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_35890  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  53.24 
 
 
239 aa  182  4.0000000000000006e-45  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.479689 
 
 
-
 
NC_013530  Xcel_1460  two component transcriptional regulator, LuxR family  50 
 
 
224 aa  180  2e-44  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.659068  n/a   
 
 
-
 
NC_009921  Franean1_6494  two component LuxR family transcriptional regulator  46.79 
 
 
235 aa  178  4e-44  Frankia sp. EAN1pec  Bacteria  normal  0.0149487  normal  0.504125 
 
 
-
 
NC_008541  Arth_3490  two component LuxR family transcriptional regulator  49.77 
 
 
218 aa  178  5.999999999999999e-44  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_3029  two component transcriptional regulator, LuxR family  48.36 
 
 
815 aa  177  1e-43  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00871852  hitchhiker  0.00628617 
 
 
-
 
NC_013530  Xcel_2524  two component transcriptional regulator, LuxR family  54.09 
 
 
228 aa  174  7e-43  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.0516799  n/a   
 
 
-
 
NC_009921  Franean1_0340  two component LuxR family transcriptional regulator  46.01 
 
 
221 aa  174  9.999999999999999e-43  Frankia sp. EAN1pec  Bacteria  normal  normal  0.0115466 
 
 
-
 
NC_013739  Cwoe_0318  two component transcriptional regulator, LuxR family  49.77 
 
 
221 aa  172  2.9999999999999996e-42  Conexibacter woesei DSM 14684  Bacteria  normal  0.29485  normal  0.172489 
 
 
-
 
NC_009921  Franean1_6700  two component LuxR family transcriptional regulator  46.73 
 
 
257 aa  169  2e-41  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_1746  two component transcriptional regulator, LuxR family  45.62 
 
 
222 aa  169  3e-41  Nakamurella multipartita DSM 44233  Bacteria  normal  0.139209  normal  0.0305301 
 
 
-
 
NC_009921  Franean1_7225  two component LuxR family transcriptional regulator  44.86 
 
 
229 aa  167  9e-41  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013169  Ksed_07220  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  45.91 
 
 
226 aa  165  5e-40  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal  0.740026 
 
 
-
 
NC_008726  Mvan_2073  two component LuxR family transcriptional regulator  44.6 
 
 
217 aa  163  2.0000000000000002e-39  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.776481 
 
 
-
 
NC_007777  Francci3_0084  two component LuxR family transcriptional regulator  49.07 
 
 
239 aa  160  1e-38  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_2504  two component LuxR family transcriptional regulator  41.12 
 
 
218 aa  159  3e-38  Frankia sp. EAN1pec  Bacteria  decreased coverage  0.00866313  normal 
 
 
-
 
NC_013739  Cwoe_1501  two component transcriptional regulator, LuxR family  38.53 
 
 
228 aa  141  7e-33  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.138703 
 
 
-
 
NC_013595  Sros_0503  response regulator receiver protein  40.09 
 
 
226 aa  135  4e-31  Streptosporangium roseum DSM 43021  Bacteria  normal  0.544154  normal 
 
 
-
 
NC_013595  Sros_2445  response regulator receiver protein  37.33 
 
 
218 aa  118  6e-26  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0115114  normal  0.02149 
 
 
-
 
NC_009921  Franean1_6440  adenylate/guanylate cyclase  39.02 
 
 
463 aa  115  3.9999999999999997e-25  Frankia sp. EAN1pec  Bacteria  normal  0.084335  normal  0.0956308 
 
 
-
 
NC_013595  Sros_1910  response regulator receiver protein  35.11 
 
 
226 aa  114  1.0000000000000001e-24  Streptosporangium roseum DSM 43021  Bacteria  normal  0.238062  normal  0.36963 
 
 
-
 
NC_013595  Sros_9329  response regulator receiver protein  37.17 
 
 
217 aa  112  3e-24  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_014212  Mesil_1051  two component transcriptional regulator, LuxR family  42.33 
 
 
211 aa  108  4.0000000000000004e-23  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.0337978 
 
 
-
 
NC_013525  Tter_0300  two component transcriptional regulator, LuxR family  35.91 
 
 
224 aa  108  5e-23  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
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