More than 300 homologs were found in PanDaTox collection
for query gene Caci_3787 on replicon NC_013131
Organism: Catenulispora acidiphila DSM 44928



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013131  Caci_3787  binding-protein-dependent transport systems inner membrane component  100 
 
 
314 aa  616  1e-175  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_007406  Nwi_0673  binding-protein dependent transport system inner membrane protein  44.44 
 
 
275 aa  222  7e-57  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.0666321  normal  0.331074 
 
 
-
 
NC_002947  PP_0208  nitrate ABC transporter, permease protein, putative  47.13 
 
 
260 aa  221  9e-57  Pseudomonas putida KT2440  Bacteria  normal  normal  0.473726 
 
 
-
 
NC_009720  Xaut_2085  binding-protein-dependent transport systems inner membrane component  44.19 
 
 
319 aa  218  1e-55  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.0787698 
 
 
-
 
NC_007778  RPB_1473  binding-protein dependent transport system inner membrane protein  41.84 
 
 
306 aa  216  5e-55  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.0411979  normal 
 
 
-
 
NC_011757  Mchl_4201  binding-protein-dependent transport systems inner membrane component  45.67 
 
 
305 aa  215  5.9999999999999996e-55  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_3160  binding-protein dependent transport system inner membrane protein  42.96 
 
 
274 aa  211  1e-53  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.913146  normal 
 
 
-
 
NC_010172  Mext_3346  binding-protein-dependent transport systems inner membrane component  46.33 
 
 
291 aa  211  2e-53  Methylobacterium extorquens PA1  Bacteria  normal  0.252204  normal 
 
 
-
 
NC_010501  PputW619_5010  binding-protein-dependent transport systems inner membrane component  46.72 
 
 
260 aa  207  2e-52  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_010510  Mrad2831_6154  binding-protein-dependent transport systems inner membrane component  44.91 
 
 
295 aa  207  2e-52  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_4185  binding-protein-dependent transport systems inner membrane component  49.12 
 
 
283 aa  202  6e-51  Methylobacterium populi BJ001  Bacteria  normal  0.321257  normal 
 
 
-
 
NC_011757  Mchl_3671  binding-protein-dependent transport systems inner membrane component  48.23 
 
 
287 aa  201  1.9999999999999998e-50  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.0347715  normal 
 
 
-
 
NC_008062  Bcen_6102  binding-protein-dependent transport systems inner membrane component  45.16 
 
 
291 aa  201  1.9999999999999998e-50  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_1975  binding-protein-dependent transport systems inner membrane component  45.16 
 
 
291 aa  201  1.9999999999999998e-50  Burkholderia cenocepacia HI2424  Bacteria  normal  0.690359  n/a   
 
 
-
 
NC_010508  Bcenmc03_1999  binding-protein-dependent transport systems inner membrane component  45.56 
 
 
291 aa  189  5e-47  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_4879  putative ABC transporter, permease protein  42.8 
 
 
263 aa  174  1.9999999999999998e-42  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.132635 
 
 
-
 
NC_010084  Bmul_1295  binding-protein-dependent transport systems inner membrane component  45.12 
 
 
290 aa  172  5e-42  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.0425684  normal  0.379949 
 
 
-
 
NC_008554  Sfum_2216  binding-protein-dependent transport systems inner membrane component  32.09 
 
 
314 aa  155  6e-37  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.82677  normal  0.484673 
 
 
-
 
NC_008825  Mpe_A0924  ABC transporter permease protein  36.44 
 
 
258 aa  155  1e-36  Methylibium petroleiphilum PM1  Bacteria  normal  0.175022  normal 
 
 
-
 
NC_008554  Sfum_2218  binding-protein-dependent transport systems inner membrane component  37.44 
 
 
290 aa  152  1e-35  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.484673 
 
 
-
 
NC_011004  Rpal_4641  binding-protein-dependent transport systems inner membrane component  32.73 
 
 
277 aa  140  3e-32  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.750363  n/a   
 
 
-
 
NC_008825  Mpe_A0926  nitrate ABC transporter, permease protein, putative  34.48 
 
 
274 aa  140  3.9999999999999997e-32  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_6545  ABC transporter permease  35.58 
 
 
269 aa  139  4.999999999999999e-32  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.276106 
 
 
-
 
NC_010511  M446_0464  binding-protein-dependent transport systems inner membrane component  36.19 
 
 
288 aa  137  2e-31  Methylobacterium sp. 4-46  Bacteria  normal  0.349721  hitchhiker  0.00645779 
 
 
-
 
NC_010465  YPK_1957  binding-protein-dependent transport systems inner membrane component  36.11 
 
 
273 aa  137  3.0000000000000003e-31  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_1848  ABC transporter permease  36.11 
 
 
273 aa  137  3.0000000000000003e-31  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_007953  Bxe_C0735  nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein  34.78 
 
 
273 aa  136  4e-31  Burkholderia xenovorans LB400  Bacteria  normal  0.714635  normal 
 
 
-
 
NC_011887  Mnod_7932  binding-protein-dependent transport systems inner membrane component  35.71 
 
 
283 aa  134  3e-30  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_3869  binding-protein-dependent transport systems inner membrane component  36.95 
 
 
274 aa  133  3.9999999999999996e-30  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_2152  binding-protein dependent transport system inner membrane protein  37.69 
 
 
271 aa  130  3e-29  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.529987 
 
 
-
 
NC_009635  Maeo_0992  binding-protein-dependent transport systems inner membrane component  38.92 
 
 
254 aa  130  4.0000000000000003e-29  Methanococcus aeolicus Nankai-3  Archaea  normal  n/a   
 
 
-
 
NC_009634  Mevan_0512  binding-protein-dependent transport systems inner membrane component  33.88 
 
 
253 aa  129  5.0000000000000004e-29  Methanococcus vannielii SB  Archaea  normal  n/a   
 
 
-
 
NC_011832  Mpal_1076  binding-protein-dependent transport systems inner membrane component  37.31 
 
 
269 aa  129  7.000000000000001e-29  Methanosphaerula palustris E1-9c  Archaea  normal  0.406887  normal  0.454808 
 
 
-
 
NC_008340  Mlg_1704  nitrate ABC transporter, inner membrane subunit  32.8 
 
 
311 aa  128  1.0000000000000001e-28  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal 
 
 
-
 
NC_009975  MmarC6_1476  binding-protein-dependent transport systems inner membrane component  35.68 
 
 
253 aa  127  2.0000000000000002e-28  Methanococcus maripaludis C6  Archaea  normal  n/a   
 
 
-
 
NC_009637  MmarC7_0444  binding-protein-dependent transport systems inner membrane component  35.68 
 
 
253 aa  127  2.0000000000000002e-28  Methanococcus maripaludis C7  Archaea  normal  normal 
 
 
-
 
NC_011891  A2cp1_3891  binding-protein-dependent transport systems inner membrane component  36.45 
 
 
269 aa  126  5e-28  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_3807  binding-protein-dependent transport systems inner membrane component  36.45 
 
 
269 aa  126  5e-28  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_3750  ABC nitrate/sulfonate/bicarbonate transporter, inner membrane subunit  36.45 
 
 
269 aa  125  6e-28  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_013517  Sterm_0483  binding-protein-dependent transport systems inner membrane component  30.65 
 
 
275 aa  126  6e-28  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_1261  binding-protein-dependent transport systems inner membrane component  38.69 
 
 
273 aa  125  7e-28  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.306936 
 
 
-
 
NC_011757  Mchl_1422  binding-protein-dependent transport systems inner membrane component  38.69 
 
 
273 aa  125  7e-28  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_009720  Xaut_4051  binding-protein-dependent transport systems inner membrane component  35.37 
 
 
273 aa  125  8.000000000000001e-28  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.395379 
 
 
-
 
NC_010725  Mpop_1211  binding-protein-dependent transport systems inner membrane component  38.69 
 
 
273 aa  125  1e-27  Methylobacterium populi BJ001  Bacteria  normal  0.132759  normal  0.452833 
 
 
-
 
NC_007604  Synpcc7942_1489  nitrate transport permease  30.99 
 
 
278 aa  125  1e-27  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_1108  binding-protein-dependent transport systems inner membrane component  36.08 
 
 
255 aa  123  5e-27  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.135552 
 
 
-
 
NC_009428  Rsph17025_0765  binding-protein-dependent transport systems inner membrane component  34.52 
 
 
265 aa  122  9.999999999999999e-27  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_009135  MmarC5_0393  binding-protein-dependent transport systems inner membrane component  35.35 
 
 
253 aa  121  9.999999999999999e-27  Methanococcus maripaludis C5  Archaea  normal  0.0876322  n/a   
 
 
-
 
NC_007955  Mbur_2132  ABC nitrate/sulfonate/bicarbonate transporter, inner membrane subunit  32.79 
 
 
262 aa  121  1.9999999999999998e-26  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
NC_009485  BBta_2566  ABC transporter, membrane subunit  31.75 
 
 
252 aa  121  1.9999999999999998e-26  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.345232 
 
 
-
 
NC_008553  Mthe_0521  binding-protein-dependent transport systems inner membrane component  36.46 
 
 
239 aa  120  3e-26  Methanosaeta thermophila PT  Archaea  normal  n/a   
 
 
-
 
NC_004311  BRA1188  taurine ABC transporter, permease protein  34.36 
 
 
250 aa  119  6e-26  Brucella suis 1330  Bacteria  normal  0.0612406  n/a   
 
 
-
 
NC_007348  Reut_B5801  binding-protein dependent transport system inner membrane protein  29.09 
 
 
290 aa  119  6e-26  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_5146  binding-protein-dependent transport systems inner membrane component  38.14 
 
 
277 aa  119  6e-26  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0887356  n/a   
 
 
-
 
NC_007355  Mbar_A1031  sulfonate ABC transporter, permease protein  32.16 
 
 
261 aa  118  1.9999999999999998e-25  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal 
 
 
-
 
NC_010465  YPK_0423  binding-protein-dependent transport systems inner membrane component  31.58 
 
 
264 aa  117  1.9999999999999998e-25  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_013889  TK90_0666  nitrate ABC transporter, inner membrane subunit  29.32 
 
 
311 aa  117  1.9999999999999998e-25  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.0569164  decreased coverage  0.0039857 
 
 
-
 
NC_012912  Dd1591_1439  nitrate ABC transporter, inner membrane subunit  29.47 
 
 
310 aa  118  1.9999999999999998e-25  Dickeya zeae Ech1591  Bacteria  normal  0.062597  n/a   
 
 
-
 
NC_009708  YpsIP31758_0355  putative ABC aliphatic sulfonates transporter, permease subunit  31.58 
 
 
264 aa  117  1.9999999999999998e-25  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_4508  binding-protein-dependent transport systems inner membrane component  42.31 
 
 
277 aa  117  3e-25  Methylobacterium sp. 4-46  Bacteria  normal  0.854714  normal  0.909107 
 
 
-
 
NC_012880  Dd703_1642  binding-protein-dependent transport systems inner membrane component  32.72 
 
 
263 aa  117  3e-25  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_3065  binding-protein-dependent transport systems inner membrane component  31.17 
 
 
280 aa  117  3e-25  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.228654 
 
 
-
 
NC_002947  PP_0231  binding-protein-dependent transport systems inner membrane component  30.04 
 
 
279 aa  117  3.9999999999999997e-25  Pseudomonas putida KT2440  Bacteria  normal  0.33405  hitchhiker  0.000710194 
 
 
-
 
NC_012850  Rleg_2304  binding-protein-dependent transport systems inner membrane component  30.25 
 
 
278 aa  116  3.9999999999999997e-25  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.37818 
 
 
-
 
NC_009636  Smed_1127  binding-protein-dependent transport systems inner membrane component  33.16 
 
 
267 aa  116  3.9999999999999997e-25  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_014150  Bmur_0154  binding-protein-dependent transport systems inner membrane component  28.16 
 
 
264 aa  117  3.9999999999999997e-25  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_009636  Smed_3151  binding-protein-dependent transport systems inner membrane component  35.03 
 
 
263 aa  116  5e-25  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_1763  binding-protein-dependent transport systems inner membrane component  38.94 
 
 
282 aa  116  6e-25  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_009436  Ent638_2324  nitrate ABC transporter, inner membrane subunit  29.47 
 
 
293 aa  116  6e-25  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_0397  binding-protein-dependent transport systems inner membrane component  31.91 
 
 
285 aa  115  6.9999999999999995e-25  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.987071 
 
 
-
 
NC_011726  PCC8801_4395  nitrate ABC transporter, inner membrane subunit  29.17 
 
 
277 aa  115  6.9999999999999995e-25  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_4458  nitrate ABC transporter, inner membrane subunit  29.17 
 
 
277 aa  115  6.9999999999999995e-25  Cyanothece sp. PCC 8802  Bacteria  normal  0.698055  normal  0.534513 
 
 
-
 
NC_009051  Memar_0850  binding-protein-dependent transport systems inner membrane component  35.44 
 
 
258 aa  115  7.999999999999999e-25  Methanoculleus marisnigri JR1  Archaea  hitchhiker  0.00204788  n/a   
 
 
-
 
NC_007644  Moth_1974  binding-protein dependent transport system inner membrane protein  32.94 
 
 
261 aa  115  1.0000000000000001e-24  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.000000226251  normal 
 
 
-
 
NC_011666  Msil_0772  binding-protein-dependent transport systems inner membrane component  31.65 
 
 
302 aa  115  1.0000000000000001e-24  Methylocella silvestris BL2  Bacteria  n/a    normal  0.0528102 
 
 
-
 
NC_014165  Tbis_1380  binding-protein-dependent transporter inner membrane component  32.79 
 
 
277 aa  115  1.0000000000000001e-24  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.153307 
 
 
-
 
NC_012912  Dd1591_1673  binding-protein-dependent transport systems inner membrane component  32.71 
 
 
263 aa  114  2.0000000000000002e-24  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_2337  nitrate ABC transporter, inner membrane subunit  27.9 
 
 
282 aa  114  2.0000000000000002e-24  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_1736  binding-protein-dependent transport systems inner membrane component  31.53 
 
 
264 aa  114  2.0000000000000002e-24  Serratia proteamaculans 568  Bacteria  normal  0.440066  normal  0.144233 
 
 
-
 
NC_009074  BURPS668_1822  aliphatic sulfonates ABC transporter, permease protein  33.99 
 
 
269 aa  114  2.0000000000000002e-24  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_010581  Bind_0676  binding-protein-dependent transport systems inner membrane component  32.77 
 
 
279 aa  114  3e-24  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal  0.30868 
 
 
-
 
NC_009832  Spro_4564  taurine transporter subunit  34.12 
 
 
279 aa  113  3e-24  Serratia proteamaculans 568  Bacteria  normal  normal  0.746145 
 
 
-
 
NC_008752  Aave_3042  binding-protein-dependent transport systems inner membrane component  42.07 
 
 
292 aa  113  3e-24  Acidovorax citrulli AAC00-1  Bacteria  normal  0.780897  normal  0.0430449 
 
 
-
 
NC_010159  YpAngola_A3693  taurine transporter subunit  33.18 
 
 
284 aa  112  5e-24  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_009708  YpsIP31758_3936  taurine transporter subunit  33.18 
 
 
284 aa  112  5e-24  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_011729  PCC7424_3526  nitrate ABC transporter, inner membrane subunit  27.16 
 
 
280 aa  113  5e-24  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.471487 
 
 
-
 
NC_010465  YPK_0260  taurine transporter subunit  33.18 
 
 
284 aa  112  5e-24  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A1391  NO3-/NO2- ABC transporter  26.15 
 
 
305 aa  113  5e-24  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.36361 
 
 
-
 
NC_006348  BMA1238  aliphatic sulfonate ABC transporter, permease protein  33.99 
 
 
273 aa  112  6e-24  Burkholderia mallei ATCC 23344  Bacteria  normal  0.466833  n/a   
 
 
-
 
NC_007434  BURPS1710b_1990  aliphatic sulfonates ABC transporter, permease protein  33.99 
 
 
273 aa  112  6e-24  Burkholderia pseudomallei 1710b  Bacteria  normal  0.088895  n/a   
 
 
-
 
NC_009620  Smed_4214  binding-protein-dependent transport systems inner membrane component  32.96 
 
 
281 aa  112  6e-24  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_2975  binding-protein-dependent transport systems inner membrane component  36.84 
 
 
284 aa  112  6e-24  Variovorax paradoxus S110  Bacteria  normal  0.27836  n/a   
 
 
-
 
NC_011004  Rpal_2882  binding-protein-dependent transport systems inner membrane component  31.94 
 
 
268 aa  112  6e-24  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.80309  n/a   
 
 
-
 
NC_008785  BMASAVP1_A1724  aliphatic sulfonate ABC transporter, permease protein  33.99 
 
 
273 aa  112  6e-24  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A0381  aliphatic sulfonate ABC transporter, permease protein  33.99 
 
 
273 aa  112  6e-24  Burkholderia mallei NCTC 10229  Bacteria  normal  0.410212  n/a   
 
 
-
 
NC_009080  BMA10247_0780  aliphatic sulfonate ABC transporter, permease protein  33.99 
 
 
273 aa  112  6e-24  Burkholderia mallei NCTC 10247  Bacteria  normal  0.175921  n/a   
 
 
-
 
NC_009076  BURPS1106A_1837  aliphatic sulfonates ABC transporter, permease protein  33.99 
 
 
269 aa  112  6e-24  Burkholderia pseudomallei 1106a  Bacteria  normal  0.669476  n/a   
 
 
-
 
NC_012854  Rleg_6460  nitrate ABC transporter, inner membrane subunit  29.57 
 
 
297 aa  112  7.000000000000001e-24  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.150998 
 
 
-
 
NC_011884  Cyan7425_4924  nitrate ABC transporter, inner membrane subunit  26.95 
 
 
280 aa  112  7.000000000000001e-24  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.815767 
 
 
-
 
NC_011726  PCC8801_3520  nitrate ABC transporter, inner membrane subunit  33.16 
 
 
280 aa  112  8.000000000000001e-24  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>