More than 300 homologs were found in PanDaTox collection
for query gene Dole_1357 on replicon NC_009943
Organism: Desulfococcus oleovorans Hxd3



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009943  Dole_1357  response regulator receiver protein  100 
 
 
144 aa  293  4e-79  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.48275  n/a   
 
 
-
 
NC_013173  Dbac_0313  response regulator receiver protein  57.66 
 
 
143 aa  155  1e-37  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0254543  n/a   
 
 
-
 
NC_008554  Sfum_0648  response regulator receiver protein  57.66 
 
 
151 aa  155  2e-37  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_0618  response regulator receiver protein  53.12 
 
 
157 aa  143  7.0000000000000006e-34  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_1361  response regulator receiver protein  50.72 
 
 
147 aa  141  2e-33  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1351  response regulator receiver protein  53.96 
 
 
141 aa  141  3e-33  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.000171187  n/a   
 
 
-
 
NC_009943  Dole_1350  response regulator receiver protein  48.89 
 
 
147 aa  140  7e-33  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00189482  n/a   
 
 
-
 
NC_013173  Dbac_2042  response regulator receiver protein  49.26 
 
 
147 aa  138  1.9999999999999998e-32  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_0314  response regulator receiver protein  57.26 
 
 
131 aa  138  3e-32  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0234873  n/a   
 
 
-
 
NC_013173  Dbac_1807  response regulator receiver protein  57.63 
 
 
139 aa  135  2e-31  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_0695  response regulator receiver domain-containing protein  48.8 
 
 
141 aa  134  4e-31  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.396926  n/a   
 
 
-
 
NC_008751  Dvul_0173  response regulator receiver protein  54.31 
 
 
121 aa  129  1.0000000000000001e-29  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_011769  DvMF_1991  response regulator receiver protein  55.17 
 
 
153 aa  125  2.0000000000000002e-28  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_009943  Dole_1352  response regulator receiver protein  52.5 
 
 
139 aa  124  4.0000000000000003e-28  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00001959  n/a   
 
 
-
 
NC_008554  Sfum_0657  response regulator receiver protein  48.51 
 
 
143 aa  122  2e-27  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.771795  normal 
 
 
-
 
NC_008554  Sfum_0632  response regulator receiver protein  47.62 
 
 
135 aa  121  4e-27  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_011769  DvMF_1773  response regulator receiver sensor signal transduction histidine kinase  44.44 
 
 
408 aa  118  1.9999999999999998e-26  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_013173  Dbac_2037  response regulator receiver protein  52.78 
 
 
120 aa  119  1.9999999999999998e-26  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_0620  response regulator receiver protein  47.37 
 
 
142 aa  117  6e-26  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_011769  DvMF_1988  response regulator receiver protein  50.86 
 
 
119 aa  116  9.999999999999999e-26  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_013173  Dbac_2272  response regulator receiver sensor signal transduction histidine kinase  46.67 
 
 
382 aa  116  9.999999999999999e-26  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.275022  n/a   
 
 
-
 
NC_009943  Dole_1362  response regulator receiver protein  40.3 
 
 
159 aa  115  1.9999999999999998e-25  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1360  response regulator receiver sensor signal transduction histidine kinase  48.21 
 
 
403 aa  114  5e-25  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1358  response regulator receiver protein  46.61 
 
 
144 aa  112  1.0000000000000001e-24  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.107991  n/a   
 
 
-
 
NC_009943  Dole_2739  two component, sigma54 specific, Fis family transcriptional regulator  43.97 
 
 
451 aa  112  2.0000000000000002e-24  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.693002  n/a   
 
 
-
 
NC_011883  Ddes_1566  response regulator receiver protein  46.28 
 
 
126 aa  112  2.0000000000000002e-24  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_1772  response regulator receiver protein  45.08 
 
 
151 aa  112  2.0000000000000002e-24  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_011883  Ddes_0018  response regulator receiver protein  44.35 
 
 
135 aa  110  5e-24  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  decreased coverage  0.00000218096  n/a   
 
 
-
 
NC_011769  DvMF_1769  response regulator receiver protein  47.06 
 
 
129 aa  110  6e-24  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_009943  Dole_2331  response regulator receiver protein  37.68 
 
 
142 aa  109  1.0000000000000001e-23  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00000000425244  n/a   
 
 
-
 
NC_011769  DvMF_2334  response regulator receiver protein  48.25 
 
 
151 aa  109  1.0000000000000001e-23  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_013173  Dbac_2034  response regulator receiver protein  45.74 
 
 
300 aa  108  2.0000000000000002e-23  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_0692  response regulator receiver domain-containing protein  41.79 
 
 
145 aa  108  4.0000000000000004e-23  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  decreased coverage  0.000176776  n/a   
 
 
-
 
NC_011883  Ddes_0816  response regulator receiver protein  44.26 
 
 
157 aa  107  6e-23  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_0327  response regulator receiver domain-containing protein  41.3 
 
 
142 aa  107  8.000000000000001e-23  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_0404  response regulator receiver protein  43.33 
 
 
151 aa  106  1e-22  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.134088 
 
 
-
 
NC_009943  Dole_1341  response regulator receiver protein  45.67 
 
 
301 aa  106  1e-22  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_0321  response regulator receiver domain-containing protein  44.74 
 
 
122 aa  105  3e-22  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_0403  response regulator receiver sensor signal transduction histidine kinase  41.54 
 
 
374 aa  104  4e-22  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.150899 
 
 
-
 
NC_008751  Dvul_0407  response regulator receiver protein  46.96 
 
 
128 aa  103  6e-22  Desulfovibrio vulgaris DP4  Bacteria  normal  0.627834  normal  0.12665 
 
 
-
 
NC_011830  Dhaf_4779  two component, sigma54 specific, transcriptional regulator, Fis family  43.93 
 
 
494 aa  103  6e-22  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1347  response regulator receiver protein  42.06 
 
 
688 aa  103  9e-22  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_0150  response regulator receiver protein  52.1 
 
 
134 aa  102  1e-21  Desulfovibrio vulgaris DP4  Bacteria  normal  0.89872  normal  0.680282 
 
 
-
 
NC_008554  Sfum_1934  two component, sigma54 specific, Fis family transcriptional regulator  41.88 
 
 
476 aa  101  3e-21  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.808753  normal  0.132653 
 
 
-
 
NC_008751  Dvul_2827  response regulator receiver protein  45.37 
 
 
137 aa  101  3e-21  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_0636  response regulator receiver protein  50 
 
 
124 aa  101  4e-21  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.621219  normal 
 
 
-
 
NC_009943  Dole_1348  response regulator receiver protein  37.5 
 
 
173 aa  100  5e-21  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_0654  response regulator receiver protein  43.55 
 
 
413 aa  100  5e-21  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.113697  normal 
 
 
-
 
NC_011146  Gbem_2715  response regulator receiver modulated diguanylate cyclase  43.33 
 
 
314 aa  99.8  1e-20  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_1843  two component, sigma54 specific, transcriptional regulator, Fis family  43.97 
 
 
465 aa  99.8  1e-20  Thauera sp. MZ1T  Bacteria  normal  0.798265  n/a   
 
 
-
 
NC_012918  GM21_1525  response regulator receiver modulated diguanylate cyclase  43.33 
 
 
316 aa  99  2e-20  Geobacter sp. M21  Bacteria  n/a    hitchhiker  2.15223e-23 
 
 
-
 
NC_013501  Rmar_1797  two component, sigma54 specific, transcriptional regulator, Fis family  40.44 
 
 
461 aa  99  2e-20  Rhodothermus marinus DSM 4252  Bacteria  normal  0.774224  n/a   
 
 
-
 
NC_008609  Ppro_0435  response regulator receiver protein  42.62 
 
 
124 aa  99  2e-20  Pelobacter propionicus DSM 2379  Bacteria  hitchhiker  0.00876892  n/a   
 
 
-
 
NC_007517  Gmet_2679  response regulator receiver domain-containing protein  41.32 
 
 
129 aa  98.2  3e-20  Geobacter metallireducens GS-15  Bacteria  normal  0.380915  normal  0.27601 
 
 
-
 
NC_007519  Dde_0328  response regulator receiver domain-containing protein  42.15 
 
 
406 aa  98.2  3e-20  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.918345  n/a   
 
 
-
 
NC_008554  Sfum_3111  two component, sigma54 specific, Fis family transcriptional regulator  44.63 
 
 
458 aa  98.2  3e-20  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_008609  Ppro_0710  two component, sigma54 specific, Fis family transcriptional regulator  41.04 
 
 
456 aa  98.6  3e-20  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2269  response regulator receiver protein  44.54 
 
 
130 aa  97.8  4e-20  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.740525  n/a   
 
 
-
 
NC_011769  DvMF_2346  response regulator receiver protein  45.54 
 
 
136 aa  97.8  4e-20  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_013173  Dbac_2035  response regulator receiver protein  43.24 
 
 
129 aa  97.8  5e-20  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_3286  two component, sigma54 specific, transcriptional regulator, Fis family  40.91 
 
 
458 aa  97.4  5e-20  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_1394  two component, sigma54 specific, Fis family transcriptional regulator  37.5 
 
 
450 aa  97.4  5e-20  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.205793  normal  0.0550645 
 
 
-
 
CP001509  ECD_03753  fused DNA-binding response regulator in two-component regulatory system with GlnL: response regulator/sigma54 interaction protein  39.06 
 
 
469 aa  97.1  6e-20  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_4118  nitrogen metabolism transcriptional regulator, NtrC, Fis Family  39.06 
 
 
469 aa  97.4  6e-20  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_2217  two component transcriptional regulator, winged helix family  38.06 
 
 
276 aa  97.4  6e-20  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00294817  normal 
 
 
-
 
NC_010814  Glov_1377  two component, sigma54 specific, transcriptional regulator, Fis family  40 
 
 
462 aa  97.4  6e-20  Geobacter lovleyi SZ  Bacteria  normal  0.244526  n/a   
 
 
-
 
NC_009800  EcHS_A4095  nitrogen regulation protein NR(I)  39.06 
 
 
469 aa  97.1  6e-20  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_4148  nitrogen regulation protein NR(I)  39.06 
 
 
469 aa  97.4  6e-20  Escherichia coli ATCC 8739  Bacteria  normal  normal  0.221467 
 
 
-
 
NC_010498  EcSMS35_4253  nitrogen regulation protein NR(I)  39.06 
 
 
472 aa  97.4  6e-20  Escherichia coli SMS-3-5  Bacteria  normal  0.177692  normal  0.167125 
 
 
-
 
NC_011353  ECH74115_5314  nitrogen regulation protein NR(I)  39.06 
 
 
472 aa  97.4  6e-20  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.111299  normal  0.738695 
 
 
-
 
NC_010658  SbBS512_E4344  nitrogen regulation protein NR(I)  39.06 
 
 
469 aa  97.4  6e-20  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_012892  B21_03702  hypothetical protein  39.06 
 
 
469 aa  97.1  6e-20  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_009801  EcE24377A_4390  nitrogen regulation protein NR(I)  39.06 
 
 
469 aa  97.4  6e-20  Escherichia coli E24377A  Bacteria  normal  0.127215  n/a   
 
 
-
 
NC_002939  GSU0598  sigma-54 dependent DNA-binding response regulator  44.74 
 
 
470 aa  97.1  7e-20  Geobacter sulfurreducens PCA  Bacteria  normal  0.885444  n/a   
 
 
-
 
NC_008609  Ppro_1179  two component, sigma54 specific, Fis family transcriptional regulator  45 
 
 
457 aa  97.1  7e-20  Pelobacter propionicus DSM 2379  Bacteria  normal  0.655382  n/a   
 
 
-
 
NC_007404  Tbd_0904  two component Fis family transcriptional regulator  45.05 
 
 
454 aa  97.1  8e-20  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.629928  normal 
 
 
-
 
NC_007519  Dde_0324  response regulator receiver domain-containing protein  44.86 
 
 
127 aa  97.1  8e-20  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.581793  n/a   
 
 
-
 
NC_008554  Sfum_0821  response regulator receiver modulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase  41.94 
 
 
1139 aa  97.1  8e-20  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.187038 
 
 
-
 
NC_007517  Gmet_0812  two component, sigma54 specific, Fis family transcriptional regulator  42.86 
 
 
453 aa  96.7  9e-20  Geobacter metallireducens GS-15  Bacteria  normal  0.0257022  hitchhiker  0.00000328811 
 
 
-
 
NC_012918  GM21_0684  two component, sigma54 specific, transcriptional regulator, Fis family  42.86 
 
 
469 aa  96.3  1e-19  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.0000000000150794 
 
 
-
 
NC_013223  Dret_0868  multi-sensor signal transduction histidine kinase  47.57 
 
 
650 aa  96.7  1e-19  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_0962  two component, sigma54 specific, transcriptional regulator, Fis family  40.15 
 
 
458 aa  96.3  1e-19  Geobacter sp. M21  Bacteria  n/a    normal  0.277353 
 
 
-
 
NC_011891  A2cp1_1954  two component, sigma54 specific, transcriptional regulator, Fis family  42.99 
 
 
464 aa  96.3  1e-19  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.611403  n/a   
 
 
-
 
NC_011145  AnaeK_1869  two component, sigma54 specific, transcriptional regulator, Fis family  43.93 
 
 
464 aa  96.3  1e-19  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_2924  two component, sigma54 specific, Fis family transcriptional regulator  43.86 
 
 
470 aa  96.3  1e-19  Geobacter metallireducens GS-15  Bacteria  normal  0.777319  hitchhiker  0.0000000000564278 
 
 
-
 
NC_010571  Oter_2405  response regulator receiver sensor signal transduction histidine kinase  44.7 
 
 
383 aa  96.3  1e-19  Opitutus terrae PB90-1  Bacteria  normal  0.109691  normal 
 
 
-
 
NC_011146  Gbem_0671  two component, sigma54 specific, transcriptional regulator, Fis family  42.5 
 
 
469 aa  96.3  1e-19  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_2335  response regulator receiver protein  44.17 
 
 
411 aa  96.7  1e-19  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.0000388714  n/a   
 
 
-
 
CP001509  ECD_03881  fused DNA-binding response regulator in two-component regulatory system with ZraS: response regulator/sigma54 interaction protein  42.98 
 
 
441 aa  95.5  2e-19  Escherichia coli BL21(DE3)  Bacteria  normal  0.0124745  n/a   
 
 
-
 
NC_011353  ECH74115_5475  transcriptional regulatory protein ZraR  42.98 
 
 
441 aa  95.5  2e-19  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_009675  Anae109_0732  two component, sigma54 specific, Fis family transcriptional regulator  38.41 
 
 
471 aa  95.5  2e-19  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.121473  normal 
 
 
-
 
NC_011080  SNSL254_A4287  nitrogen regulation protein NR(I)  38.28 
 
 
469 aa  95.5  2e-19  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.0756679  normal 
 
 
-
 
NC_010468  EcolC_4021  transcriptional regulatory protein ZraR  42.98 
 
 
441 aa  95.5  2e-19  Escherichia coli ATCC 8739  Bacteria  normal  0.0128092  normal  0.0227655 
 
 
-
 
NC_011149  SeAg_B4237  nitrogen regulation protein NR(I)  38.28 
 
 
469 aa  95.5  2e-19  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_012892  B21_03834  hypothetical protein  42.98 
 
 
441 aa  95.5  2e-19  Escherichia coli BL21  Bacteria  normal  0.0118236  n/a   
 
 
-
 
NC_007760  Adeh_2009  two component, sigma54 specific, Fis family transcriptional regulator  43.93 
 
 
463 aa  95.5  2e-19  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_011094  SeSA_A4216  nitrogen regulation protein NR(I)  38.28 
 
 
469 aa  95.5  2e-19  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.295301  normal 
 
 
-
 
NC_011205  SeD_A4394  nitrogen regulation protein NR(I)  38.28 
 
 
469 aa  95.5  2e-19  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
NC_011083  SeHA_C4333  nitrogen regulation protein NR(I)  38.28 
 
 
469 aa  95.5  2e-19  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.140715  normal 
 
 
-
 
NC_009483  Gura_2914  two component, sigma-54 specific, Fis family transcriptional regulator  42.99 
 
 
459 aa  95.1  3e-19  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
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