More than 300 homologs were found in PanDaTox collection
for query gene CFF8240_0846 on replicon NC_008599
Organism: Campylobacter fetus subsp. fetus 82-40



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008599  CFF8240_0846  DNA-binding protein HU  100 
 
 
104 aa  197  3e-50  Campylobacter fetus subsp. fetus 82-40  Bacteria  hitchhiker  0.0000034735  n/a   
 
 
-
 
NC_003912  CJE0991  DNA-binding protein HU  65.22 
 
 
98 aa  122  1e-27  Campylobacter jejuni RM1221  Bacteria  unclonable  0.0000336504  n/a   
 
 
-
 
NC_008787  CJJ81176_1731  DNA-binding protein HU  65.22 
 
 
98 aa  122  1e-27  Campylobacter jejuni subsp. jejuni 81-176  Bacteria  unclonable  0.00000000000000434632  n/a   
 
 
-
 
NC_009707  JJD26997_0901  DNA-binding protein HU  65.22 
 
 
98 aa  122  1e-27  Campylobacter jejuni subsp. doylei 269.97  Bacteria  unclonable  0.00000000000106292  n/a   
 
 
-
 
NC_012039  Cla_1225  DNA-binding protein HU  64.71 
 
 
100 aa  112  2.0000000000000002e-24  Campylobacter lari RM2100  Bacteria  hitchhiker  5.973909999999999e-20  n/a   
 
 
-
 
NC_009802  CCC13826_0021  DNA-binding protein HU 1 (DNA-binding protein II; HB)  62.07 
 
 
100 aa  104  5e-22  Campylobacter concisus 13826  Bacteria  unclonable  0.00000160012  n/a   
 
 
-
 
NC_009714  CHAB381_0798  DNA-binding protein HU 1 (DNA-binding protein II) (HB)  58.7 
 
 
107 aa  101  4e-21  Campylobacter hominis ATCC BAA-381  Bacteria  unclonable  0.000000000041032  n/a   
 
 
-
 
NC_013223  Dret_1900  histone family protein DNA-binding protein  56.18 
 
 
90 aa  98.6  3e-20  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal  0.0802524 
 
 
-
 
NC_012034  Athe_0648  histone family protein DNA-binding protein  53.33 
 
 
91 aa  97.8  5e-20  Anaerocellum thermophilum DSM 6725  Bacteria  unclonable  0.0000000000417185  n/a   
 
 
-
 
NC_011898  Ccel_2424  histone family protein DNA-binding protein  52.81 
 
 
91 aa  96.7  9e-20  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.00000000394497  n/a   
 
 
-
 
NC_013512  Sdel_0967  histone family protein DNA-binding protein  55.43 
 
 
92 aa  95.9  2e-19  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2463  histone family protein DNA-binding protein  55.06 
 
 
90 aa  95.5  2e-19  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0228112  n/a   
 
 
-
 
NC_007519  Dde_2752  histone-like DNA-binding protein  56.67 
 
 
91 aa  95.9  2e-19  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_0016  nucleoid protein HU beta subunit  52.81 
 
 
90 aa  95.1  3e-19  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_010320  Teth514_0687  histone family protein DNA-binding protein  52.75 
 
 
91 aa  93.2  1e-18  Thermoanaerobacter sp. X514  Bacteria  normal  0.105584  n/a   
 
 
-
 
NC_010831  Cphamn1_0324  histone family protein DNA-binding protein  53.33 
 
 
90 aa  92.8  1e-18  Chlorobium phaeobacteroides BS1  Bacteria  normal  0.064189  normal  0.0110025 
 
 
-
 
NC_011059  Paes_0293  histone family protein DNA-binding protein  52.75 
 
 
94 aa  92  2e-18  Prosthecochloris aestuarii DSM 271  Bacteria  normal  0.416752  normal  0.0238993 
 
 
-
 
NC_013411  GYMC61_0465  histone family protein DNA-binding protein  51.69 
 
 
90 aa  92.4  2e-18  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011146  Gbem_1275  histone family protein DNA-binding protein  53.85 
 
 
91 aa  92  2e-18  Geobacter bemidjiensis Bem  Bacteria  decreased coverage  0.0000000292942  n/a   
 
 
-
 
NC_009483  Gura_4407  histone family protein DNA-binding protein  57.14 
 
 
94 aa  92.4  2e-18  Geobacter uraniireducens Rf4  Bacteria  unclonable  0.0000000000192025  n/a   
 
 
-
 
NC_012918  GM21_3008  histone family protein DNA-binding protein  53.85 
 
 
91 aa  92  2e-18  Geobacter sp. M21  Bacteria  n/a    normal  0.341575 
 
 
-
 
NC_011662  Tmz1t_2014  histone family protein DNA-binding protein  51.69 
 
 
90 aa  91.7  3e-18  Thauera sp. MZ1T  Bacteria  decreased coverage  0.000105311  n/a   
 
 
-
 
NC_011898  Ccel_3085  histone family protein DNA-binding protein  48.31 
 
 
91 aa  91.7  3e-18  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.000115471  n/a   
 
 
-
 
NC_008609  Ppro_1181  histone family protein DNA-binding protein  50.56 
 
 
92 aa  92  3e-18  Pelobacter propionicus DSM 2379  Bacteria  normal  0.42545  n/a   
 
 
-
 
NC_008740  Maqu_1837  histone family protein DNA-binding protein  52.81 
 
 
90 aa  91.3  4e-18  Marinobacter aquaeolei VT8  Bacteria  hitchhiker  0.00431989  n/a   
 
 
-
 
NC_008554  Sfum_2107  histone family protein DNA-binding protein  50.56 
 
 
90 aa  91.3  4e-18  Syntrophobacter fumaroxidans MPOB  Bacteria  decreased coverage  0.00000844989  hitchhiker  0.00906741 
 
 
-
 
NC_007512  Plut_1957  histone-like DNA-binding protein  53.93 
 
 
91 aa  91.3  5e-18  Chlorobium luteolum DSM 273  Bacteria  hitchhiker  0.000024611  normal  0.388646 
 
 
-
 
NC_007644  Moth_0085  nucleoid protein Hbs  51.11 
 
 
91 aa  90.9  5e-18  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.0539634  normal 
 
 
-
 
NC_006368  lpp1826  hypothetical protein  47.83 
 
 
92 aa  90.9  6e-18  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_006369  lpl1822  hypothetical protein  47.83 
 
 
92 aa  90.9  6e-18  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_012793  GWCH70_2154  histone family protein DNA-binding protein  50.56 
 
 
90 aa  90.9  6e-18  Geobacillus sp. WCH70  Bacteria  hitchhiker  0.000000552537  n/a   
 
 
-
 
NC_007517  Gmet_0355  histone-like DNA-binding protein  53.85 
 
 
94 aa  90.5  7e-18  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.00204011  normal  0.390975 
 
 
-
 
NC_013421  Pecwa_3261  transcriptional regulator HU subunit beta  49.44 
 
 
90 aa  90.5  7e-18  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_1051  transcriptional regulator HU subunit beta  49.44 
 
 
90 aa  90.5  7e-18  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.593082  n/a   
 
 
-
 
NC_011661  Dtur_1514  histone family protein DNA-binding protein  50.56 
 
 
91 aa  90.5  8e-18  Dictyoglomus turgidum DSM 6724  Bacteria  decreased coverage  0.0000108882  n/a   
 
 
-
 
NC_007498  Pcar_1686  DNA-binding protein HU-beta, NS1(HU-1)  52.81 
 
 
90 aa  90.5  8e-18  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  6.460310000000001e-19  n/a   
 
 
-
 
NC_007520  Tcr_1180  histone-like DNA-binding protein  49.44 
 
 
90 aa  90.1  8e-18  Thiomicrospira crunogena XCL-2  Bacteria  unclonable  2.95654e-16  n/a   
 
 
-
 
NC_009654  Mmwyl1_1726  histone family protein DNA-binding protein  52.81 
 
 
90 aa  90.1  8e-18  Marinomonas sp. MWYL1  Bacteria  unclonable  0.00000000326644  hitchhiker  0.00672024 
 
 
-
 
NC_011883  Ddes_0087  histone family protein DNA-binding protein  54.44 
 
 
91 aa  90.1  9e-18  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_010424  Daud_0075  histone family protein DNA-binding protein  52.81 
 
 
91 aa  90.1  9e-18  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU3132  DNA-binding protein HU  54.44 
 
 
94 aa  89.7  1e-17  Geobacter sulfurreducens PCA  Bacteria  normal  0.246817  n/a   
 
 
-
 
NC_007517  Gmet_1608  histone-like DNA-binding protein  54.35 
 
 
96 aa  89.7  1e-17  Geobacter metallireducens GS-15  Bacteria  unclonable  5.49082e-20  normal 
 
 
-
 
NC_010803  Clim_0201  histone family protein DNA-binding protein  52.81 
 
 
91 aa  89.7  1e-17  Chlorobium limicola DSM 245  Bacteria  hitchhiker  0.000000429798  n/a   
 
 
-
 
NC_009253  Dred_0115  histone family protein DNA-binding protein  51.65 
 
 
95 aa  90.1  1e-17  Desulfotomaculum reducens MI-1  Bacteria  normal  0.552761  n/a   
 
 
-
 
NC_012034  Athe_2511  histone family protein DNA-binding protein  47.25 
 
 
92 aa  89  2e-17  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.0000000006954  n/a   
 
 
-
 
NC_007204  Psyc_1474  putative DNA-binding protein HU-beta  48.28 
 
 
90 aa  89  2e-17  Psychrobacter arcticus 273-4  Bacteria  hitchhiker  0.0000000000000997119  hitchhiker  0.0000985943 
 
 
-
 
NC_009012  Cthe_2657  nucleoid protein Hbs  49.44 
 
 
91 aa  89  2e-17  Clostridium thermocellum ATCC 27405  Bacteria  hitchhiker  0.000194133  n/a   
 
 
-
 
NC_010001  Cphy_0133  histone family protein DNA-binding protein  51.69 
 
 
91 aa  89  2e-17  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.0000000116647  n/a   
 
 
-
 
NC_008530  LGAS_0894  nucleoid DNA-binding protein  53.41 
 
 
91 aa  89  2e-17  Lactobacillus gasseri ATCC 33323  Bacteria  hitchhiker  8.08972e-16  hitchhiker  0.000000000000265027 
 
 
-
 
NC_008751  Dvul_1364  histone family protein DNA-binding protein  50.56 
 
 
90 aa  88.2  3e-17  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_0188  histone family protein DNA-binding protein  52.75 
 
 
94 aa  88.2  3e-17  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009505  BOV_1064  DNA-binding protein HU  50.56 
 
 
91 aa  88.2  3e-17  Brucella ovis ATCC 25840  Bacteria  normal  0.203306  n/a   
 
 
-
 
NC_012918  GM21_0170  histone family protein DNA-binding protein  52.75 
 
 
94 aa  88.2  3e-17  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.00000201093 
 
 
-
 
NC_012880  Dd703_2873  transcriptional regulator HU subunit beta  48.31 
 
 
90 aa  88.2  3e-17  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_3065  transcriptional regulator HU subunit beta  48.31 
 
 
90 aa  87.8  4e-17  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_008346  Swol_0083  DNA-binding protein HU (DNA-binding protein II)  49.44 
 
 
90 aa  88.2  4e-17  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_009513  Lreu_0765  nucleoid protein Hbs  52.27 
 
 
91 aa  88.2  4e-17  Lactobacillus reuteri DSM 20016  Bacteria  hitchhiker  0.00000296782  n/a   
 
 
-
 
NC_009487  SaurJH9_1530  histone family protein DNA-binding protein  50.56 
 
 
90 aa  87.8  5e-17  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  0.277737  n/a   
 
 
-
 
NC_002976  SERP1041  DNA-binding protein HU  50.56 
 
 
90 aa  87.8  5e-17  Staphylococcus epidermidis RP62A  Bacteria  normal  0.436255  n/a   
 
 
-
 
NC_009632  SaurJH1_1560  histone family protein DNA-binding protein  50.56 
 
 
90 aa  87.8  5e-17  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.768925  n/a   
 
 
-
 
NC_009901  Spea_3731  histone family protein DNA-binding protein  48.31 
 
 
90 aa  87.8  5e-17  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_0500  histone family protein DNA-binding protein  48.31 
 
 
90 aa  87.8  5e-17  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    hitchhiker  0.000759527 
 
 
-
 
NC_008639  Cpha266_0238  histone family protein DNA-binding protein  51.69 
 
 
91 aa  87.4  6e-17  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_3231  transcriptional regulator HU subunit beta  48.31 
 
 
90 aa  87  7e-17  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A3051  transcriptional regulator HU subunit beta  48.31 
 
 
90 aa  87  7e-17  Yersinia pestis Angola  Bacteria  hitchhiker  0.00488463  normal 
 
 
-
 
NC_009708  YpsIP31758_3089  transcriptional regulator HU subunit beta  48.31 
 
 
90 aa  87  7e-17  Yersinia pseudotuberculosis IP 31758  Bacteria  unclonable  1.42002e-19  n/a   
 
 
-
 
NC_008751  Dvul_2207  histone family protein DNA-binding protein  53.33 
 
 
91 aa  87  8e-17  Desulfovibrio vulgaris DP4  Bacteria  normal  0.976216  normal  0.483194 
 
 
-
 
NC_009831  Ssed_0600  histone family protein DNA-binding protein  47.19 
 
 
90 aa  86.7  9e-17  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_007969  Pcryo_1653  histone-like DNA-binding protein  46.07 
 
 
90 aa  86.7  9e-17  Psychrobacter cryohalolentis K5  Bacteria  unclonable  0.00000047794  unclonable  0.0000440637 
 
 
 
NC_004310  BR1105  DNA-binding protein HU  50.56 
 
 
91 aa  86.7  1e-16  Brucella suis 1330  Bacteria  normal  0.965912  n/a   
 
 
-
 
NC_009667  Oant_2203  histone family protein DNA-binding protein  49.44 
 
 
91 aa  86.3  1e-16  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.0471577  n/a   
 
 
-
 
NC_007484  Noc_1772  histone-like DNA-binding protein  49.44 
 
 
90 aa  86.7  1e-16  Nitrosococcus oceani ATCC 19707  Bacteria  decreased coverage  0.000757515  n/a   
 
 
-
 
NC_013422  Hneap_0390  histone family protein DNA-binding protein  47.19 
 
 
90 aa  86.3  1e-16  Halothiobacillus neapolitanus c2  Bacteria  decreased coverage  0.0000165854  n/a   
 
 
-
 
NC_009524  PsycPRwf_1626  histone family protein DNA-binding protein  44.94 
 
 
90 aa  86.7  1e-16  Psychrobacter sp. PRwf-1  Bacteria  unclonable  0.00000000000133039  hitchhiker  0.00000000638901 
 
 
-
 
NC_013093  Amir_0860  histone family protein DNA-binding protein  52.81 
 
 
90 aa  86.7  1e-16  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0124999  n/a   
 
 
-
 
NC_008261  CPF_2802  DNA-binding protein HU  51.69 
 
 
91 aa  86.7  1e-16  Clostridium perfringens ATCC 13124  Bacteria  hitchhiker  0.000000141643  n/a   
 
 
-
 
NC_008262  CPR_2488  DNA-binding protein HU  51.69 
 
 
91 aa  86.7  1e-16  Clostridium perfringens SM101  Bacteria  unclonable  0.0000000000405619  n/a   
 
 
-
 
NC_011769  DvMF_2799  histone family protein DNA-binding protein  53.33 
 
 
91 aa  86.3  1e-16  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_010180  BcerKBAB4_5693  histone family protein DNA-binding protein  49.44 
 
 
90 aa  86.3  1e-16  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0471576  normal  0.0346696 
 
 
-
 
CP001637  EcDH1_3169  histone family protein DNA-binding protein  48.31 
 
 
90 aa  85.5  2e-16  Escherichia coli DH1  Bacteria  hitchhiker  0.000005828  n/a   
 
 
-
 
NC_010498  EcSMS35_0483  transcriptional regulator HU subunit beta  48.31 
 
 
90 aa  85.5  2e-16  Escherichia coli SMS-3-5  Bacteria  hitchhiker  0.000219434  normal 
 
 
-
 
NC_009441  Fjoh_0139  histone family protein DNA-binding protein  47.19 
 
 
90 aa  85.5  2e-16  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_1630  histone family protein DNA-binding protein  49.44 
 
 
90 aa  85.5  2e-16  Shewanella baltica OS195  Bacteria  unclonable  0.0000000159632  normal 
 
 
-
 
NC_002977  MCA0532  DNA-binding protein HU-beta  49.44 
 
 
90 aa  85.5  2e-16  Methylococcus capsulatus str. Bath  Bacteria  decreased coverage  0.00043104  n/a   
 
 
-
 
NC_009438  Sputcn32_1493  histone family protein DNA-binding protein  49.44 
 
 
90 aa  85.5  2e-16  Shewanella putrefaciens CN-32  Bacteria  hitchhiker  0.00000000388309  n/a   
 
 
-
 
NC_009665  Shew185_1596  histone family protein DNA-binding protein  49.44 
 
 
90 aa  85.5  2e-16  Shewanella baltica OS185  Bacteria  unclonable  0.00000000000169185  n/a   
 
 
-
 
NC_008783  BARBAKC583_0550  DNA-binding protein HU-beta  47.19 
 
 
92 aa  85.5  2e-16  Bartonella bacilliformis KC583  Bacteria  normal  0.169626  n/a   
 
 
-
 
NC_004347  SO_1797  HU family DNA-binding protein  49.44 
 
 
90 aa  85.5  2e-16  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009901  Spea_2678  histone family protein DNA-binding protein  49.44 
 
 
90 aa  85.9  2e-16  Shewanella pealeana ATCC 700345  Bacteria  unclonable  0.0000000000589622  n/a   
 
 
-
 
NC_013162  Coch_1967  histone family protein DNA-binding protein  48.31 
 
 
92 aa  85.9  2e-16  Capnocytophaga ochracea DSM 7271  Bacteria  hitchhiker  0.00606172  n/a   
 
 
-
 
NC_011663  Sbal223_2747  histone family protein DNA-binding protein  49.44 
 
 
90 aa  85.5  2e-16  Shewanella baltica OS223  Bacteria  decreased coverage  0.00000000276504  normal  0.581764 
 
 
-
 
NC_010506  Swoo_4353  histone family protein DNA-binding protein  47.19 
 
 
90 aa  85.9  2e-16  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_2492  histone family protein DNA-binding protein  49.44 
 
 
90 aa  85.5  2e-16  Shewanella sp. MR-4  Bacteria  unclonable  0.000000000348442  normal  0.0842071 
 
 
-
 
NC_008322  Shewmr7_2560  histone family protein DNA-binding protein  49.44 
 
 
90 aa  85.5  2e-16  Shewanella sp. MR-7  Bacteria  unclonable  0.000000135506  normal  0.0536414 
 
 
-
 
NC_009052  Sbal_1607  histone family protein DNA-binding protein  49.44 
 
 
90 aa  85.5  2e-16  Shewanella baltica OS155  Bacteria  hitchhiker  0.0000000022491  n/a   
 
 
-
 
NC_011353  ECH74115_0526  transcriptional regulator HU subunit beta  48.31 
 
 
90 aa  85.5  2e-16  Escherichia coli O157:H7 str. EC4115  Bacteria  hitchhiker  0.00026983  normal  0.698185 
 
 
-
 
NC_009800  EcHS_A0517  transcriptional regulator HU subunit beta  48.31 
 
 
90 aa  85.5  2e-16  Escherichia coli HS  Bacteria  hitchhiker  0.0000000000441181  n/a   
 
 
-
 
NC_009801  EcE24377A_0476  transcriptional regulator HU subunit beta  48.31 
 
 
90 aa  85.5  2e-16  Escherichia coli E24377A  Bacteria  hitchhiker  0.000220916  n/a   
 
 
-
 
NC_008554  Sfum_1430  histone family protein DNA-binding protein  47.19 
 
 
90 aa  85.9  2e-16  Syntrophobacter fumaroxidans MPOB  Bacteria  hitchhiker  0.000153062  normal  0.144736 
 
 
-
 
NC_008577  Shewana3_2658  histone family protein DNA-binding protein  49.44 
 
 
90 aa  85.9  2e-16  Shewanella sp. ANA-3  Bacteria  unclonable  0.00000000180426  normal  0.730265 
 
 
-
 
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