More than 300 homologs were found in PanDaTox collection
for query gene CCC13826_0021 on replicon NC_009802
Organism: Campylobacter concisus 13826



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009802  CCC13826_0021  DNA-binding protein HU 1 (DNA-binding protein II; HB)  100 
 
 
100 aa  186  1e-46  Campylobacter concisus 13826  Bacteria  unclonable  0.00000160012  n/a   
 
 
-
 
NC_013512  Sdel_0967  histone family protein DNA-binding protein  72.22 
 
 
92 aa  121  3e-27  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_009714  CHAB381_0798  DNA-binding protein HU 1 (DNA-binding protein II) (HB)  65.59 
 
 
107 aa  117  6e-26  Campylobacter hominis ATCC BAA-381  Bacteria  unclonable  0.000000000041032  n/a   
 
 
-
 
NC_008787  CJJ81176_1731  DNA-binding protein HU  62.24 
 
 
98 aa  114  5e-25  Campylobacter jejuni subsp. jejuni 81-176  Bacteria  unclonable  0.00000000000000434632  n/a   
 
 
-
 
NC_003912  CJE0991  DNA-binding protein HU  62.24 
 
 
98 aa  114  5e-25  Campylobacter jejuni RM1221  Bacteria  unclonable  0.0000336504  n/a   
 
 
-
 
NC_009707  JJD26997_0901  DNA-binding protein HU  62.24 
 
 
98 aa  114  5e-25  Campylobacter jejuni subsp. doylei 269.97  Bacteria  unclonable  0.00000000000106292  n/a   
 
 
-
 
NC_008599  CFF8240_0846  DNA-binding protein HU  62.64 
 
 
104 aa  109  1.0000000000000001e-23  Campylobacter fetus subsp. fetus 82-40  Bacteria  hitchhiker  0.0000034735  n/a   
 
 
-
 
NC_012039  Cla_1225  DNA-binding protein HU  62.35 
 
 
100 aa  100  6e-21  Campylobacter lari RM2100  Bacteria  hitchhiker  5.973909999999999e-20  n/a   
 
 
-
 
NC_011661  Dtur_1514  histone family protein DNA-binding protein  56.18 
 
 
91 aa  99.4  1e-20  Dictyoglomus turgidum DSM 6724  Bacteria  decreased coverage  0.0000108882  n/a   
 
 
-
 
NC_012793  GWCH70_2154  histone family protein DNA-binding protein  52.81 
 
 
90 aa  91.3  4e-18  Geobacillus sp. WCH70  Bacteria  hitchhiker  0.000000552537  n/a   
 
 
-
 
NC_013411  GYMC61_0465  histone family protein DNA-binding protein  52.81 
 
 
90 aa  91.3  4e-18  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_002976  SERP1041  DNA-binding protein HU  52.81 
 
 
90 aa  89.4  1e-17  Staphylococcus epidermidis RP62A  Bacteria  normal  0.436255  n/a   
 
 
-
 
NC_012034  Athe_2511  histone family protein DNA-binding protein  47.83 
 
 
92 aa  89.7  1e-17  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.0000000006954  n/a   
 
 
-
 
NC_009632  SaurJH1_1560  histone family protein DNA-binding protein  52.81 
 
 
90 aa  89.4  1e-17  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.768925  n/a   
 
 
-
 
NC_010424  Daud_0075  histone family protein DNA-binding protein  50.56 
 
 
91 aa  89.4  1e-17  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_009487  SaurJH9_1530  histone family protein DNA-binding protein  52.81 
 
 
90 aa  89.4  1e-17  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  0.277737  n/a   
 
 
-
 
NC_011898  Ccel_3085  histone family protein DNA-binding protein  48.31 
 
 
91 aa  88.6  2e-17  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.000115471  n/a   
 
 
-
 
NC_007204  Psyc_1474  putative DNA-binding protein HU-beta  47.13 
 
 
90 aa  87.4  6e-17  Psychrobacter arcticus 273-4  Bacteria  hitchhiker  0.0000000000000997119  hitchhiker  0.0000985943 
 
 
-
 
NC_009636  Smed_0875  histone family protein DNA-binding protein  50.56 
 
 
90 aa  86.7  1e-16  Sinorhizobium medicae WSM419  Bacteria  normal  0.757232  normal 
 
 
-
 
NC_007520  Tcr_1180  histone-like DNA-binding protein  46.07 
 
 
90 aa  86.3  1e-16  Thiomicrospira crunogena XCL-2  Bacteria  unclonable  2.95654e-16  n/a   
 
 
-
 
NC_008261  CPF_2802  DNA-binding protein HU  49.45 
 
 
91 aa  86.3  1e-16  Clostridium perfringens ATCC 13124  Bacteria  hitchhiker  0.000000141643  n/a   
 
 
-
 
NC_008262  CPR_2488  DNA-binding protein HU  49.45 
 
 
91 aa  86.3  1e-16  Clostridium perfringens SM101  Bacteria  unclonable  0.0000000000405619  n/a   
 
 
-
 
NC_009012  Cthe_2657  nucleoid protein Hbs  49.44 
 
 
91 aa  85.9  2e-16  Clostridium thermocellum ATCC 27405  Bacteria  hitchhiker  0.000194133  n/a   
 
 
-
 
NC_008609  Ppro_1181  histone family protein DNA-binding protein  49.45 
 
 
92 aa  85.9  2e-16  Pelobacter propionicus DSM 2379  Bacteria  normal  0.42545  n/a   
 
 
-
 
NC_009253  Dred_0115  histone family protein DNA-binding protein  52.22 
 
 
95 aa  85.5  2e-16  Desulfotomaculum reducens MI-1  Bacteria  normal  0.552761  n/a   
 
 
-
 
NC_007969  Pcryo_1653  histone-like DNA-binding protein  45.98 
 
 
90 aa  85.5  2e-16  Psychrobacter cryohalolentis K5  Bacteria  unclonable  0.00000047794  unclonable  0.0000440637 
 
 
 
NC_009719  Plav_3229  histone family protein DNA-binding protein  47.25 
 
 
91 aa  85.1  3e-16  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_009513  Lreu_0765  nucleoid protein Hbs  51.14 
 
 
91 aa  84.3  5e-16  Lactobacillus reuteri DSM 20016  Bacteria  hitchhiker  0.00000296782  n/a   
 
 
-
 
NC_007651  BTH_I0004  DNA-binding protein HU-alpha  48.31 
 
 
126 aa  84  6e-16  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_2424  histone family protein DNA-binding protein  44.94 
 
 
91 aa  84  7e-16  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.00000000394497  n/a   
 
 
-
 
NC_006368  lpp1826  hypothetical protein  46.07 
 
 
92 aa  84  7e-16  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_006369  lpl1822  hypothetical protein  46.07 
 
 
92 aa  84  7e-16  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_009483  Gura_1918  histone family protein DNA-binding protein  51.65 
 
 
91 aa  84  7e-16  Geobacter uraniireducens Rf4  Bacteria  decreased coverage  0.000000000897645  n/a   
 
 
-
 
NC_010831  Cphamn1_0324  histone family protein DNA-binding protein  46.67 
 
 
90 aa  83.6  8e-16  Chlorobium phaeobacteroides BS1  Bacteria  normal  0.064189  normal  0.0110025 
 
 
-
 
NC_002977  MCA0532  DNA-binding protein HU-beta  47.19 
 
 
90 aa  83.6  9e-16  Methylococcus capsulatus str. Bath  Bacteria  decreased coverage  0.00043104  n/a   
 
 
-
 
NC_006348  BMA2913  DNA-binding protein HU, form B  48.31 
 
 
92 aa  83.6  9e-16  Burkholderia mallei ATCC 23344  Bacteria  normal  0.5361  n/a   
 
 
-
 
NC_009080  BMA10247_2972  DNA-binding protein HU-alpha  48.31 
 
 
92 aa  83.6  9e-16  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A3397  DNA-binding protein HU, form B  48.31 
 
 
92 aa  83.6  9e-16  Burkholderia mallei SAVP1  Bacteria  normal  0.218557  n/a   
 
 
-
 
NC_010803  Clim_0201  histone family protein DNA-binding protein  46.15 
 
 
91 aa  83.6  9e-16  Chlorobium limicola DSM 245  Bacteria  hitchhiker  0.000000429798  n/a   
 
 
-
 
NC_009074  BURPS668_0004  DNA-binding protein HU-alpha  48.31 
 
 
92 aa  83.6  9e-16  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_0004  DNA-binding protein HU-alpha  48.31 
 
 
92 aa  83.6  9e-16  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A1629  DNA-binding protein HU, form B  48.31 
 
 
92 aa  83.6  9e-16  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_1637  DNA-binding protein HU  49.44 
 
 
90 aa  83.2  0.000000000000001  Bacillus cereus ATCC 10987  Bacteria  decreased coverage  0.00420342  n/a   
 
 
-
 
NC_005945  BAS1420  DNA-binding protein HU  49.44 
 
 
90 aa  83.2  0.000000000000001  Bacillus anthracis str. Sterne  Bacteria  normal  0.190218  n/a   
 
 
-
 
NC_011773  BCAH820_1604  DNA-binding protein HU  49.44 
 
 
90 aa  83.2  0.000000000000001  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.000159132 
 
 
-
 
NC_005957  BT9727_1392  DNA-binding protein HU  49.44 
 
 
90 aa  83.2  0.000000000000001  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.011833  n/a   
 
 
-
 
NC_010627  Bphy_7326  histone family protein DNA-binding protein  45.05 
 
 
92 aa  82.8  0.000000000000001  Burkholderia phymatum STM815  Bacteria  normal  normal  0.076405 
 
 
-
 
NC_006274  BCZK1392  DNA-binding protein HU  49.44 
 
 
90 aa  83.2  0.000000000000001  Bacillus cereus E33L  Bacteria  decreased coverage  0.00000512711  n/a   
 
 
-
 
NC_010681  Bphyt_3933  histone family protein DNA-binding protein  48.31 
 
 
92 aa  82.8  0.000000000000001  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_011725  BCB4264_A1566  DNA-binding protein HU  49.44 
 
 
90 aa  83.2  0.000000000000001  Bacillus cereus B4264  Bacteria  normal  0.236067  n/a   
 
 
-
 
NC_007519  Dde_2752  histone-like DNA-binding protein  50 
 
 
91 aa  83.2  0.000000000000001  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_1531  DNA-binding protein HU  49.44 
 
 
90 aa  83.2  0.000000000000001  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.259543  n/a   
 
 
-
 
NC_007947  Mfla_0016  nucleoid protein HU beta subunit  49.44 
 
 
90 aa  82.8  0.000000000000001  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_010184  BcerKBAB4_1434  histone family protein DNA-binding protein  49.44 
 
 
90 aa  83.2  0.000000000000001  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.087278  n/a   
 
 
-
 
NC_007951  Bxe_A4504  DNA-binding protein HU-alpha  48.31 
 
 
92 aa  82.8  0.000000000000001  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.806931 
 
 
-
 
NC_011658  BCAH187_A1673  DNA-binding protein HU  49.44 
 
 
90 aa  83.2  0.000000000000001  Bacillus cereus AH187  Bacteria  hitchhiker  0.0000325838  n/a   
 
 
-
 
NC_011772  BCG9842_B3779  DNA-binding protein HU  49.44 
 
 
90 aa  83.2  0.000000000000001  Bacillus cereus G9842  Bacteria  decreased coverage  0.000354145  normal  0.961445 
 
 
-
 
NC_013205  Aaci_0186  histone family protein DNA-binding protein  49.43 
 
 
90 aa  83.2  0.000000000000001  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_1233  histone family protein DNA-binding protein  49.44 
 
 
90 aa  83.2  0.000000000000001  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.0133564  n/a   
 
 
-
 
NC_010551  BamMC406_0065  histone family protein DNA-binding protein  48.31 
 
 
92 aa  82.8  0.000000000000002  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_010622  Bphy_3067  histone family protein DNA-binding protein  48.31 
 
 
92 aa  82.4  0.000000000000002  Burkholderia phymatum STM815  Bacteria  normal  normal  0.0353619 
 
 
-
 
NC_007510  Bcep18194_A3247  histone-like DNA-binding protein  48.31 
 
 
92 aa  82.8  0.000000000000002  Burkholderia sp. 383  Bacteria  normal  normal  0.704477 
 
 
-
 
NC_007512  Plut_1957  histone-like DNA-binding protein  47.19 
 
 
91 aa  82.8  0.000000000000002  Chlorobium luteolum DSM 273  Bacteria  hitchhiker  0.000024611  normal  0.388646 
 
 
-
 
NC_010320  Teth514_0687  histone family protein DNA-binding protein  46.07 
 
 
91 aa  82.4  0.000000000000002  Thermoanaerobacter sp. X514  Bacteria  normal  0.105584  n/a   
 
 
-
 
NC_011830  Dhaf_0135  histone family protein DNA-binding protein  49.44 
 
 
91 aa  82.8  0.000000000000002  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.00267128  n/a   
 
 
-
 
NC_013162  Coch_1967  histone family protein DNA-binding protein  47.19 
 
 
92 aa  82  0.000000000000002  Capnocytophaga ochracea DSM 7271  Bacteria  hitchhiker  0.00606172  n/a   
 
 
-
 
NC_008060  Bcen_0005  histone-like DNA-binding protein  48.31 
 
 
92 aa  82.8  0.000000000000002  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.129264  n/a   
 
 
-
 
NC_008390  Bamb_0055  histone family protein DNA-binding protein  48.31 
 
 
92 aa  82.8  0.000000000000002  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_0065  histone family protein DNA-binding protein  48.31 
 
 
92 aa  82.8  0.000000000000002  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_010084  Bmul_0066  histone family protein DNA-binding protein  48.31 
 
 
92 aa  82.8  0.000000000000002  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_010508  Bcenmc03_0084  histone family protein DNA-binding protein  48.31 
 
 
92 aa  82.8  0.000000000000002  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_4266  histone family protein DNA-binding protein  46.07 
 
 
93 aa  81.6  0.000000000000003  Variovorax paradoxus S110  Bacteria  normal  0.598481  n/a   
 
 
-
 
NC_010814  Glov_1926  histone family protein DNA-binding protein  51.69 
 
 
92 aa  81.6  0.000000000000003  Geobacter lovleyi SZ  Bacteria  unclonable  0.0000000201993  n/a   
 
 
-
 
NC_012560  Avin_43920  histone-like DNA-binding protein  50.56 
 
 
90 aa  81.3  0.000000000000004  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_008789  Hhal_0600  histone family protein DNA-binding protein  49.44 
 
 
90 aa  80.9  0.000000000000005  Halorhodospira halophila SL1  Bacteria  normal  0.0791658  n/a   
 
 
-
 
NC_008346  Swol_0083  DNA-binding protein HU (DNA-binding protein II)  47.19 
 
 
90 aa  80.9  0.000000000000005  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_1726  histone family protein DNA-binding protein  48.31 
 
 
90 aa  80.9  0.000000000000006  Marinomonas sp. MWYL1  Bacteria  unclonable  0.00000000326644  hitchhiker  0.00672024 
 
 
-
 
NC_013739  Cwoe_1870  histone family protein DNA-binding protein  46.07 
 
 
91 aa  80.5  0.000000000000007  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.0130937 
 
 
-
 
NC_010718  Nther_0070  nucleoid protein Hbs  46.74 
 
 
92 aa  80.5  0.000000000000007  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.0240129  normal 
 
 
-
 
NC_008340  Mlg_2285  histone family protein DNA-binding protein  44.94 
 
 
90 aa  80.5  0.000000000000007  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0556838  normal 
 
 
-
 
NC_002950  PG0121  DNA-binding protein HU  47.67 
 
 
88 aa  80.1  0.000000000000009  Porphyromonas gingivalis W83  Bacteria  n/a    hitchhiker  0.00022412 
 
 
-
 
NC_008740  Maqu_1837  histone family protein DNA-binding protein  47.19 
 
 
90 aa  79.7  0.00000000000001  Marinobacter aquaeolei VT8  Bacteria  hitchhiker  0.00431989  n/a   
 
 
-
 
NC_007484  Noc_1772  histone-like DNA-binding protein  44.94 
 
 
90 aa  79.7  0.00000000000001  Nitrosococcus oceani ATCC 19707  Bacteria  decreased coverage  0.000757515  n/a   
 
 
-
 
NC_012034  Athe_0648  histone family protein DNA-binding protein  44.44 
 
 
91 aa  79.7  0.00000000000001  Anaerocellum thermophilum DSM 6725  Bacteria  unclonable  0.0000000000417185  n/a   
 
 
-
 
NC_009524  PsycPRwf_1626  histone family protein DNA-binding protein  41.38 
 
 
90 aa  79.7  0.00000000000001  Psychrobacter sp. PRwf-1  Bacteria  unclonable  0.00000000000133039  hitchhiker  0.00000000638901 
 
 
-
 
NC_013171  Apre_0964  histone family protein DNA-binding protein  46.67 
 
 
92 aa  80.1  0.00000000000001  Anaerococcus prevotii DSM 20548  Bacteria  decreased coverage  0.00000000994236  n/a   
 
 
-
 
NC_008576  Mmc1_0914  HU family DNA-binding protein  43.82 
 
 
91 aa  79.3  0.00000000000001  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_008576  Mmc1_2903  histone family protein DNA-binding protein  47.19 
 
 
91 aa  79.3  0.00000000000002  Magnetococcus sp. MC-1  Bacteria  decreased coverage  0.00933352  normal  0.626047 
 
 
-
 
NC_007643  Rru_A1553  histone-like DNA-binding protein  48.35 
 
 
91 aa  79.3  0.00000000000002  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_0133  histone family protein DNA-binding protein  46.07 
 
 
91 aa  78.6  0.00000000000002  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.0000000116647  n/a   
 
 
-
 
NC_013510  Tcur_3460  histone family protein DNA-binding protein  46.67 
 
 
92 aa  79  0.00000000000002  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0312988  n/a   
 
 
-
 
NC_011365  Gdia_3327  histone family protein DNA-binding protein  48.89 
 
 
94 aa  79.3  0.00000000000002  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.372094  normal  0.0697763 
 
 
-
 
NC_008576  Mmc1_1251  histone family protein DNA-binding protein  47.19 
 
 
91 aa  79.3  0.00000000000002  Magnetococcus sp. MC-1  Bacteria  normal  0.0902596  normal  0.20081 
 
 
-
 
NC_013223  Dret_1900  histone family protein DNA-binding protein  47.19 
 
 
90 aa  78.6  0.00000000000003  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal  0.0802524 
 
 
-
 
NC_012850  Rleg_1341  histone family protein DNA-binding protein  46.07 
 
 
91 aa  78.2  0.00000000000003  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_008530  LGAS_0894  nucleoid DNA-binding protein  50 
 
 
91 aa  78.6  0.00000000000003  Lactobacillus gasseri ATCC 33323  Bacteria  hitchhiker  8.08972e-16  hitchhiker  0.000000000000265027 
 
 
-
 
NC_013093  Amir_0860  histone family protein DNA-binding protein  46.07 
 
 
90 aa  77.8  0.00000000000004  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0124999  n/a   
 
 
-
 
NC_007644  Moth_0085  nucleoid protein Hbs  46.67 
 
 
91 aa  78.2  0.00000000000004  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.0539634  normal 
 
 
-
 
NC_007794  Saro_1362  histone-like DNA-binding protein  47.19 
 
 
90 aa  77.8  0.00000000000004  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.102123  n/a   
 
 
-
 
NC_013206  Aaci_3021  histone family protein DNA-binding protein  42.7 
 
 
91 aa  78.2  0.00000000000004  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
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