More than 300 homologs were found in PanDaTox collection
for query gene Tcur_3460 on replicon NC_013510
Organism: Thermomonospora curvata DSM 43183



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013510  Tcur_3460  histone family protein DNA-binding protein  100 
 
 
92 aa  181  3e-45  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0312988  n/a   
 
 
-
 
NC_014210  Ndas_0187  histone family protein DNA-binding protein  75 
 
 
93 aa  139  9.999999999999999e-33  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_0628  histone-like DNA-binding protein  75.27 
 
 
93 aa  137  7e-32  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_2800  histone family protein DNA-binding protein  65.91 
 
 
98 aa  123  9e-28  Thermobispora bispora DSM 43833  Bacteria  normal  0.224088  normal  0.168856 
 
 
-
 
NC_013595  Sros_8015  histone-like DNA-binding protein  65.91 
 
 
99 aa  120  7e-27  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_008578  Acel_1589  histone family protein DNA-binding protein  61.11 
 
 
163 aa  115  1.9999999999999998e-25  Acidothermus cellulolyticus 11B  Bacteria  normal  normal  0.462794 
 
 
-
 
NC_009664  Krad_2805  histone family protein DNA-binding protein  56.52 
 
 
187 aa  108  2.0000000000000002e-23  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.535515  normal 
 
 
-
 
NC_009664  Krad_1360  histone family protein DNA-binding protein  57.61 
 
 
179 aa  108  2.0000000000000002e-23  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.659546  normal  0.714096 
 
 
-
 
NC_009664  Krad_2005  histone family protein DNA-binding protein  56.52 
 
 
188 aa  108  2.0000000000000002e-23  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_2337  histone family protein DNA-binding protein  56.52 
 
 
185 aa  108  3e-23  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_8047  histone family protein DNA-binding protein  58.24 
 
 
232 aa  108  3e-23  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.278826  normal 
 
 
-
 
NC_013947  Snas_4997  histone family protein DNA-binding protein  56.52 
 
 
185 aa  105  1e-22  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.296499 
 
 
-
 
NC_009953  Sare_1151  histone family protein DNA-binding protein  56.52 
 
 
209 aa  105  2e-22  Salinispora arenicola CNS-205  Bacteria  normal  unclonable  0.0000000347409 
 
 
-
 
NC_008699  Noca_3296  nucleoid protein Hbs  58.06 
 
 
202 aa  105  2e-22  Nocardioides sp. JS614  Bacteria  normal  0.58524  n/a   
 
 
-
 
NC_009380  Strop_1260  histone family protein DNA-binding protein  56.18 
 
 
237 aa  103  1e-21  Salinispora tropica CNB-440  Bacteria  decreased coverage  0.00209562  normal  0.663698 
 
 
-
 
NC_007777  Francci3_3619  histone-like DNA-binding protein  56.67 
 
 
94 aa  103  1e-21  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_1234  histone family protein DNA-binding protein  53.26 
 
 
159 aa  101  3e-21  Thermomonospora curvata DSM 43183  Bacteria  normal  0.253249  n/a   
 
 
-
 
NC_009921  Franean1_1115  histone family protein DNA-binding protein  56.67 
 
 
94 aa  101  4e-21  Frankia sp. EAN1pec  Bacteria  normal  0.545347  normal  0.284391 
 
 
-
 
NC_013441  Gbro_3213  histone family protein DNA-binding protein  55.91 
 
 
193 aa  99.4  1e-20  Gordonia bronchialis DSM 43247  Bacteria  normal  0.133792  n/a   
 
 
-
 
NC_013093  Amir_6004  histone family protein DNA-binding protein  59.78 
 
 
285 aa  98.6  2e-20  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0576704  n/a   
 
 
-
 
NC_014158  Tpau_2846  histone family protein DNA-binding protein  52.75 
 
 
235 aa  97.1  8e-20  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_002976  SERP1041  DNA-binding protein HU  52.81 
 
 
90 aa  96.7  9e-20  Staphylococcus epidermidis RP62A  Bacteria  normal  0.436255  n/a   
 
 
-
 
NC_009632  SaurJH1_1560  histone family protein DNA-binding protein  52.81 
 
 
90 aa  96.7  9e-20  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.768925  n/a   
 
 
-
 
NC_009487  SaurJH9_1530  histone family protein DNA-binding protein  52.81 
 
 
90 aa  96.7  9e-20  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  0.277737  n/a   
 
 
-
 
NC_008312  Tery_1610  nucleoid protein Hbs  57.78 
 
 
95 aa  95.5  2e-19  Trichodesmium erythraeum IMS101  Bacteria  normal  0.148246  normal  0.783199 
 
 
-
 
NC_011662  Tmz1t_0440  histone family protein DNA-binding protein  55.81 
 
 
91 aa  95.1  3e-19  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_010622  Bphy_3067  histone family protein DNA-binding protein  52.81 
 
 
92 aa  94  7e-19  Burkholderia phymatum STM815  Bacteria  normal  normal  0.0353619 
 
 
-
 
NC_007651  BTH_I0004  DNA-binding protein HU-alpha  51.69 
 
 
126 aa  93.6  9e-19  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU3132  DNA-binding protein HU  53.76 
 
 
94 aa  93.2  1e-18  Geobacter sulfurreducens PCA  Bacteria  normal  0.246817  n/a   
 
 
-
 
NC_010508  Bcenmc03_0084  histone family protein DNA-binding protein  51.69 
 
 
92 aa  92.8  1e-18  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_009074  BURPS668_0004  DNA-binding protein HU-alpha  51.69 
 
 
92 aa  93.2  1e-18  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A3397  DNA-binding protein HU, form B  51.69 
 
 
92 aa  93.2  1e-18  Burkholderia mallei SAVP1  Bacteria  normal  0.218557  n/a   
 
 
-
 
NC_010084  Bmul_0066  histone family protein DNA-binding protein  51.69 
 
 
92 aa  92.8  1e-18  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_006348  BMA2913  DNA-binding protein HU, form B  51.69 
 
 
92 aa  93.2  1e-18  Burkholderia mallei ATCC 23344  Bacteria  normal  0.5361  n/a   
 
 
-
 
NC_008836  BMA10229_A1629  DNA-binding protein HU, form B  51.69 
 
 
92 aa  93.2  1e-18  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_010551  BamMC406_0065  histone family protein DNA-binding protein  51.69 
 
 
92 aa  92.8  1e-18  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_007510  Bcep18194_A3247  histone-like DNA-binding protein  51.69 
 
 
92 aa  92.8  1e-18  Burkholderia sp. 383  Bacteria  normal  normal  0.704477 
 
 
-
 
NC_009253  Dred_0115  histone family protein DNA-binding protein  53.33 
 
 
95 aa  92.8  1e-18  Desulfotomaculum reducens MI-1  Bacteria  normal  0.552761  n/a   
 
 
-
 
NC_009076  BURPS1106A_0004  DNA-binding protein HU-alpha  51.69 
 
 
92 aa  93.2  1e-18  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_008060  Bcen_0005  histone-like DNA-binding protein  51.69 
 
 
92 aa  92.8  1e-18  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.129264  n/a   
 
 
-
 
NC_009080  BMA10247_2972  DNA-binding protein HU-alpha  51.69 
 
 
92 aa  93.2  1e-18  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008390  Bamb_0055  histone family protein DNA-binding protein  51.69 
 
 
92 aa  92.8  1e-18  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_0065  histone family protein DNA-binding protein  51.69 
 
 
92 aa  92.8  1e-18  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_3933  histone family protein DNA-binding protein  50.56 
 
 
92 aa  91.7  3e-18  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A4504  DNA-binding protein HU-alpha  50.56 
 
 
92 aa  91.7  3e-18  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.806931 
 
 
-
 
NC_007517  Gmet_1608  histone-like DNA-binding protein  53.76 
 
 
96 aa  91.3  4e-18  Geobacter metallireducens GS-15  Bacteria  unclonable  5.49082e-20  normal 
 
 
-
 
NC_012793  GWCH70_2154  histone family protein DNA-binding protein  51.69 
 
 
90 aa  90.9  5e-18  Geobacillus sp. WCH70  Bacteria  hitchhiker  0.000000552537  n/a   
 
 
-
 
NC_007517  Gmet_0355  histone-like DNA-binding protein  52.69 
 
 
94 aa  90.9  5e-18  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.00204011  normal  0.390975 
 
 
-
 
NC_013411  GYMC61_0465  histone family protein DNA-binding protein  51.69 
 
 
90 aa  90.9  5e-18  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_014248  Aazo_0318  histone family protein DNA-binding protein  54.84 
 
 
94 aa  90.5  7e-18  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_4407  histone family protein DNA-binding protein  52.69 
 
 
94 aa  89.4  1e-17  Geobacter uraniireducens Rf4  Bacteria  unclonable  0.0000000000192025  n/a   
 
 
-
 
NC_007413  Ava_1767  nucleoid protein Hbs  54.84 
 
 
94 aa  90.1  1e-17  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_007520  Tcr_1180  histone-like DNA-binding protein  52.81 
 
 
90 aa  89.7  1e-17  Thiomicrospira crunogena XCL-2  Bacteria  unclonable  2.95654e-16  n/a   
 
 
-
 
NC_010627  Bphy_7326  histone family protein DNA-binding protein  48.31 
 
 
92 aa  89.7  1e-17  Burkholderia phymatum STM815  Bacteria  normal  normal  0.076405 
 
 
-
 
NC_007949  Bpro_4958  histone-like DNA-binding protein  50.56 
 
 
103 aa  90.1  1e-17  Polaromonas sp. JS666  Bacteria  normal  0.674818  normal 
 
 
-
 
NC_009380  Strop_4159  histone family protein DNA-binding protein  51.11 
 
 
91 aa  89.4  1e-17  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_008340  Mlg_2285  histone family protein DNA-binding protein  48.31 
 
 
90 aa  89.4  1e-17  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0556838  normal 
 
 
-
 
NC_008765  Ajs_4236  histone family protein DNA-binding protein  50.56 
 
 
91 aa  89.7  1e-17  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_2937  histone family protein DNA-binding protein  53.26 
 
 
95 aa  89  2e-17  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013205  Aaci_0186  histone family protein DNA-binding protein  48.86 
 
 
90 aa  89  2e-17  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_3008  histone family protein DNA-binding protein  51.69 
 
 
91 aa  89  2e-17  Geobacter sp. M21  Bacteria  n/a    normal  0.341575 
 
 
-
 
NC_008146  Mmcs_1923  nucleoid protein Hbs  53.85 
 
 
225 aa  89.4  2e-17  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_1837  histone family protein DNA-binding protein  51.69 
 
 
90 aa  89  2e-17  Marinobacter aquaeolei VT8  Bacteria  hitchhiker  0.00431989  n/a   
 
 
-
 
NC_009077  Mjls_1903  nucleoid protein Hbs  53.85 
 
 
225 aa  89.4  2e-17  Mycobacterium sp. JLS  Bacteria  normal  normal  0.388212 
 
 
-
 
NC_013161  Cyan8802_3159  histone family protein DNA-binding protein  53.26 
 
 
95 aa  89  2e-17  Cyanothece sp. PCC 8802  Bacteria  normal  0.124819  normal 
 
 
-
 
NC_011146  Gbem_1275  histone family protein DNA-binding protein  51.69 
 
 
91 aa  89  2e-17  Geobacter bemidjiensis Bem  Bacteria  decreased coverage  0.0000000292942  n/a   
 
 
-
 
NC_008705  Mkms_1969  nucleoid protein Hbs  53.85 
 
 
225 aa  89.4  2e-17  Mycobacterium sp. KMS  Bacteria  normal  0.843128  normal 
 
 
-
 
NC_010506  Swoo_4353  histone family protein DNA-binding protein  51.69 
 
 
90 aa  88.2  3e-17  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_0600  histone family protein DNA-binding protein  52.81 
 
 
90 aa  88.6  3e-17  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_007404  Tbd_0007  histone-like DNA-binding protein  54.12 
 
 
98 aa  88.2  4e-17  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal 
 
 
-
 
NC_009901  Spea_3731  histone family protein DNA-binding protein  51.69 
 
 
90 aa  87.8  5e-17  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_009565  TBFG_13001  DNA-binding protein hupB (histone-like protein)  53.85 
 
 
214 aa  87.8  5e-17  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_2489  histone family protein DNA-binding protein  54.44 
 
 
95 aa  87.4  6e-17  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_013422  Hneap_0390  histone family protein DNA-binding protein  48.31 
 
 
90 aa  87.4  6e-17  Halothiobacillus neapolitanus c2  Bacteria  decreased coverage  0.0000165854  n/a   
 
 
-
 
NC_007963  Csal_2043  histone-like DNA-binding protein  50.56 
 
 
90 aa  87.4  6e-17  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_009524  PsycPRwf_1626  histone family protein DNA-binding protein  45.98 
 
 
90 aa  87.4  7e-17  Psychrobacter sp. PRwf-1  Bacteria  unclonable  0.00000000000133039  hitchhiker  0.00000000638901 
 
 
-
 
NC_009338  Mflv_4225  histone family protein DNA-binding protein  53.85 
 
 
217 aa  87  7e-17  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.631825  normal  0.775898 
 
 
-
 
NC_008726  Mvan_2137  histone family protein DNA-binding protein  53.85 
 
 
212 aa  87  7e-17  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_1551  histone-like DNA-binding protein  47.19 
 
 
103 aa  87  8e-17  Polaromonas sp. JS666  Bacteria  hitchhiker  0.00525571  normal  0.659297 
 
 
-
 
NC_011898  Ccel_3085  histone family protein DNA-binding protein  44.94 
 
 
91 aa  87  8e-17  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.000115471  n/a   
 
 
-
 
NC_007969  Pcryo_1653  histone-like DNA-binding protein  44.19 
 
 
90 aa  86.7  9e-17  Psychrobacter cryohalolentis K5  Bacteria  unclonable  0.00000047794  unclonable  0.0000440637 
 
 
 
NC_009654  Mmwyl1_1726  histone family protein DNA-binding protein  50.56 
 
 
90 aa  86.7  1e-16  Marinomonas sp. MWYL1  Bacteria  unclonable  0.00000000326644  hitchhiker  0.00672024 
 
 
-
 
NC_009972  Haur_3398  histone family protein DNA-binding protein  48.91 
 
 
92 aa  86.7  1e-16  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.000223697  n/a   
 
 
-
 
NC_014230  CA2559_09623  probable DNA-binding protein HU  47.19 
 
 
90 aa  86.3  2e-16  Croceibacter atlanticus HTCC2559  Bacteria  normal  0.355669  n/a   
 
 
-
 
NC_013595  Sros_3445  hypothetical protein  49.46 
 
 
106 aa  85.9  2e-16  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0106732  normal  0.0926246 
 
 
-
 
NC_006368  lpp1826  hypothetical protein  49.44 
 
 
92 aa  85.5  2e-16  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_006369  lpl1822  hypothetical protein  49.44 
 
 
92 aa  85.5  2e-16  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_007298  Daro_3512  histone-like DNA-binding protein  50 
 
 
99 aa  85.9  2e-16  Dechloromonas aromatica RCB  Bacteria  normal  0.848806  normal  0.0177296 
 
 
-
 
NC_011901  Tgr7_0942  histone family protein DNA-binding protein  50.56 
 
 
90 aa  85.5  2e-16  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_010424  Daud_0075  histone family protein DNA-binding protein  47.19 
 
 
91 aa  85.9  2e-16  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_0170  histone family protein DNA-binding protein  49.46 
 
 
94 aa  85.1  3e-16  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.00000201093 
 
 
-
 
NC_007604  Synpcc7942_1108  nucleoid protein Hbs  48.89 
 
 
91 aa  85.1  3e-16  Synechococcus elongatus PCC 7942  Bacteria  normal  0.0932961  normal  0.770831 
 
 
-
 
NC_009483  Gura_1918  histone family protein DNA-binding protein  48.31 
 
 
91 aa  85.1  3e-16  Geobacter uraniireducens Rf4  Bacteria  decreased coverage  0.000000000897645  n/a   
 
 
-
 
NC_011146  Gbem_0188  histone family protein DNA-binding protein  49.46 
 
 
94 aa  85.1  3e-16  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A3051  transcriptional regulator HU subunit beta  49.44 
 
 
90 aa  84.7  4e-16  Yersinia pestis Angola  Bacteria  hitchhiker  0.00488463  normal 
 
 
-
 
NC_007204  Psyc_1474  putative DNA-binding protein HU-beta  43.02 
 
 
90 aa  84.7  4e-16  Psychrobacter arcticus 273-4  Bacteria  hitchhiker  0.0000000000000997119  hitchhiker  0.0000985943 
 
 
-
 
NC_010465  YPK_3231  transcriptional regulator HU subunit beta  49.44 
 
 
90 aa  84.7  4e-16  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_0648  histone family protein DNA-binding protein  47.78 
 
 
91 aa  84.7  4e-16  Anaerocellum thermophilum DSM 6725  Bacteria  unclonable  0.0000000000417185  n/a   
 
 
-
 
NC_009092  Shew_0430  histone family protein DNA-binding protein  51.69 
 
 
90 aa  84.7  4e-16  Shewanella loihica PV-4  Bacteria  normal  0.719598  normal 
 
 
-
 
NC_009708  YpsIP31758_3089  transcriptional regulator HU subunit beta  49.44 
 
 
90 aa  84.7  4e-16  Yersinia pseudotuberculosis IP 31758  Bacteria  unclonable  1.42002e-19  n/a   
 
 
-
 
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