More than 300 homologs were found in PanDaTox collection
for query gene Smon_0792 on replicon NC_013515
Organism: Streptobacillus moniliformis DSM 12112



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013515  Smon_0792  histone family protein DNA-binding protein  100 
 
 
93 aa  177  2.9999999999999997e-44  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_013517  Sterm_1558  histone family protein DNA-binding protein  74.73 
 
 
91 aa  109  2.0000000000000002e-23  Sebaldella termitidis ATCC 33386  Bacteria  unclonable  0.0000000000749747  n/a   
 
 
-
 
NC_013517  Sterm_2689  histone family protein DNA-binding protein  72.22 
 
 
92 aa  103  8e-22  Sebaldella termitidis ATCC 33386  Bacteria  unclonable  0.0000000000455611  n/a   
 
 
-
 
NC_012034  Athe_0648  histone family protein DNA-binding protein  50.55 
 
 
91 aa  87  8e-17  Anaerocellum thermophilum DSM 6725  Bacteria  unclonable  0.0000000000417185  n/a   
 
 
-
 
NC_010627  Bphy_7326  histone family protein DNA-binding protein  44.57 
 
 
92 aa  85.9  2e-16  Burkholderia phymatum STM815  Bacteria  normal  normal  0.076405 
 
 
-
 
NC_003912  CJE0991  DNA-binding protein HU  42.39 
 
 
98 aa  84.7  4e-16  Campylobacter jejuni RM1221  Bacteria  unclonable  0.0000336504  n/a   
 
 
-
 
NC_008787  CJJ81176_1731  DNA-binding protein HU  42.39 
 
 
98 aa  84.7  4e-16  Campylobacter jejuni subsp. jejuni 81-176  Bacteria  unclonable  0.00000000000000434632  n/a   
 
 
-
 
NC_009707  JJD26997_0901  DNA-binding protein HU  42.39 
 
 
98 aa  84.7  4e-16  Campylobacter jejuni subsp. doylei 269.97  Bacteria  unclonable  0.00000000000106292  n/a   
 
 
-
 
NC_009714  CHAB381_0798  DNA-binding protein HU 1 (DNA-binding protein II) (HB)  45.65 
 
 
107 aa  84.3  5e-16  Campylobacter hominis ATCC BAA-381  Bacteria  unclonable  0.000000000041032  n/a   
 
 
-
 
NC_010003  Pmob_1910  histone family protein DNA-binding protein  48.31 
 
 
90 aa  82.8  0.000000000000001  Petrotoga mobilis SJ95  Bacteria  unclonable  0.00000000311196  n/a   
 
 
-
 
NC_012034  Athe_2511  histone family protein DNA-binding protein  46.07 
 
 
92 aa  82.4  0.000000000000002  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.0000000006954  n/a   
 
 
-
 
NC_011661  Dtur_1514  histone family protein DNA-binding protein  48.35 
 
 
91 aa  82  0.000000000000003  Dictyoglomus turgidum DSM 6724  Bacteria  decreased coverage  0.0000108882  n/a   
 
 
-
 
NC_009012  Cthe_2657  nucleoid protein Hbs  47.25 
 
 
91 aa  81.6  0.000000000000004  Clostridium thermocellum ATCC 27405  Bacteria  hitchhiker  0.000194133  n/a   
 
 
-
 
NC_011898  Ccel_3085  histone family protein DNA-binding protein  42.86 
 
 
91 aa  79.7  0.00000000000001  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.000115471  n/a   
 
 
-
 
NC_007604  Synpcc7942_1108  nucleoid protein Hbs  45.56 
 
 
91 aa  79.3  0.00000000000001  Synechococcus elongatus PCC 7942  Bacteria  normal  0.0932961  normal  0.770831 
 
 
-
 
NC_008554  Sfum_2107  histone family protein DNA-binding protein  44.94 
 
 
90 aa  79.7  0.00000000000001  Syntrophobacter fumaroxidans MPOB  Bacteria  decreased coverage  0.00000844989  hitchhiker  0.00906741 
 
 
-
 
NC_008599  CFF8240_0846  DNA-binding protein HU  45.65 
 
 
104 aa  79.7  0.00000000000001  Campylobacter fetus subsp. fetus 82-40  Bacteria  hitchhiker  0.0000034735  n/a   
 
 
-
 
NC_012039  Cla_1225  DNA-binding protein HU  41.18 
 
 
100 aa  79.3  0.00000000000002  Campylobacter lari RM2100  Bacteria  hitchhiker  5.973909999999999e-20  n/a   
 
 
-
 
NC_011059  Paes_0293  histone family protein DNA-binding protein  47.19 
 
 
94 aa  79.3  0.00000000000002  Prosthecochloris aestuarii DSM 271  Bacteria  normal  0.416752  normal  0.0238993 
 
 
-
 
NC_009076  BURPS1106A_0004  DNA-binding protein HU-alpha  41.76 
 
 
92 aa  78.2  0.00000000000004  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_002976  SERP1041  DNA-binding protein HU  43.82 
 
 
90 aa  78.2  0.00000000000004  Staphylococcus epidermidis RP62A  Bacteria  normal  0.436255  n/a   
 
 
-
 
NC_009080  BMA10247_2972  DNA-binding protein HU-alpha  41.76 
 
 
92 aa  78.2  0.00000000000004  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A3397  DNA-binding protein HU, form B  41.76 
 
 
92 aa  78.2  0.00000000000004  Burkholderia mallei SAVP1  Bacteria  normal  0.218557  n/a   
 
 
-
 
NC_006348  BMA2913  DNA-binding protein HU, form B  41.76 
 
 
92 aa  78.2  0.00000000000004  Burkholderia mallei ATCC 23344  Bacteria  normal  0.5361  n/a   
 
 
-
 
NC_009632  SaurJH1_1560  histone family protein DNA-binding protein  43.82 
 
 
90 aa  78.2  0.00000000000004  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.768925  n/a   
 
 
-
 
NC_008836  BMA10229_A1629  DNA-binding protein HU, form B  41.76 
 
 
92 aa  78.2  0.00000000000004  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_0004  DNA-binding protein HU-alpha  41.76 
 
 
92 aa  78.2  0.00000000000004  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009487  SaurJH9_1530  histone family protein DNA-binding protein  43.82 
 
 
90 aa  78.2  0.00000000000004  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  0.277737  n/a   
 
 
-
 
NC_013223  Dret_1900  histone family protein DNA-binding protein  44.94 
 
 
90 aa  77.8  0.00000000000005  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal  0.0802524 
 
 
-
 
NC_007952  Bxe_B0956  DNA-binding protein HU-alpha  42.22 
 
 
92 aa  77.8  0.00000000000005  Burkholderia xenovorans LB400  Bacteria  normal  0.667832  normal 
 
 
-
 
NC_010676  Bphyt_4682  histone family protein DNA-binding protein  42.22 
 
 
92 aa  77.8  0.00000000000005  Burkholderia phytofirmans PsJN  Bacteria  normal  0.0505442  normal 
 
 
-
 
NC_010622  Bphy_3067  histone family protein DNA-binding protein  41.76 
 
 
92 aa  77.8  0.00000000000005  Burkholderia phymatum STM815  Bacteria  normal  normal  0.0353619 
 
 
-
 
NC_008346  Swol_0083  DNA-binding protein HU (DNA-binding protein II)  47.06 
 
 
90 aa  77.8  0.00000000000005  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_010803  Clim_0201  histone family protein DNA-binding protein  46.07 
 
 
91 aa  77.4  0.00000000000006  Chlorobium limicola DSM 245  Bacteria  hitchhiker  0.000000429798  n/a   
 
 
-
 
NC_010508  Bcenmc03_0084  histone family protein DNA-binding protein  41.76 
 
 
92 aa  77.4  0.00000000000006  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_009616  Tmel_0429  histone family protein DNA-binding protein  44.57 
 
 
92 aa  77.4  0.00000000000006  Thermosipho melanesiensis BI429  Bacteria  decreased coverage  0.00929572  n/a   
 
 
-
 
NC_010320  Teth514_0687  histone family protein DNA-binding protein  45.56 
 
 
91 aa  77.4  0.00000000000006  Thermoanaerobacter sp. X514  Bacteria  normal  0.105584  n/a   
 
 
-
 
NC_007510  Bcep18194_A3247  histone-like DNA-binding protein  41.76 
 
 
92 aa  77.4  0.00000000000006  Burkholderia sp. 383  Bacteria  normal  normal  0.704477 
 
 
-
 
NC_007651  BTH_I0004  DNA-binding protein HU-alpha  41.76 
 
 
126 aa  77.4  0.00000000000006  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_010551  BamMC406_0065  histone family protein DNA-binding protein  41.76 
 
 
92 aa  77.4  0.00000000000006  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_4407  histone family protein DNA-binding protein  47.78 
 
 
94 aa  77.4  0.00000000000006  Geobacter uraniireducens Rf4  Bacteria  unclonable  0.0000000000192025  n/a   
 
 
-
 
NC_008060  Bcen_0005  histone-like DNA-binding protein  41.76 
 
 
92 aa  77.4  0.00000000000006  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.129264  n/a   
 
 
-
 
NC_010084  Bmul_0066  histone family protein DNA-binding protein  41.76 
 
 
92 aa  77.4  0.00000000000006  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_008390  Bamb_0055  histone family protein DNA-binding protein  41.76 
 
 
92 aa  77.4  0.00000000000006  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_0065  histone family protein DNA-binding protein  41.76 
 
 
92 aa  77.4  0.00000000000006  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_002950  PG0121  DNA-binding protein HU  45.12 
 
 
88 aa  77  0.00000000000008  Porphyromonas gingivalis W83  Bacteria  n/a    hitchhiker  0.00022412 
 
 
-
 
NC_008527  LACR_0525  nucleoid protein Hbs  47.73 
 
 
91 aa  77  0.00000000000008  Lactococcus lactis subsp. cremoris SK11  Bacteria  decreased coverage  0.00046461  n/a   
 
 
-
 
NC_010681  Bphyt_3933  histone family protein DNA-binding protein  41.76 
 
 
92 aa  76.3  0.0000000000001  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_1767  nucleoid protein Hbs  44.09 
 
 
94 aa  76.3  0.0000000000001  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_007512  Plut_1957  histone-like DNA-binding protein  46.07 
 
 
91 aa  76.3  0.0000000000001  Chlorobium luteolum DSM 273  Bacteria  hitchhiker  0.000024611  normal  0.388646 
 
 
-
 
NC_007604  Synpcc7942_2248  nucleoid protein Hbs  41.57 
 
 
91 aa  76.6  0.0000000000001  Synechococcus elongatus PCC 7942  Bacteria  normal  normal  0.0990789 
 
 
-
 
NC_007951  Bxe_A4504  DNA-binding protein HU-alpha  41.76 
 
 
92 aa  76.3  0.0000000000001  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.806931 
 
 
-
 
NC_007519  Dde_2058  histone-like DNA-binding protein  43.82 
 
 
90 aa  75.5  0.0000000000002  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.954956  n/a   
 
 
-
 
NC_011898  Ccel_2424  histone family protein DNA-binding protein  42.22 
 
 
91 aa  75.9  0.0000000000002  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.00000000394497  n/a   
 
 
-
 
NC_014248  Aazo_0318  histone family protein DNA-binding protein  43.01 
 
 
94 aa  75.9  0.0000000000002  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_2301  nucleoid protein Hbs  42.7 
 
 
90 aa  75.5  0.0000000000002  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.265465  n/a   
 
 
-
 
NC_008740  Maqu_3758  histone family protein DNA-binding protein  37.08 
 
 
90 aa  75.1  0.0000000000003  Marinobacter aquaeolei VT8  Bacteria  normal  0.639339  n/a   
 
 
-
 
NC_010831  Cphamn1_0324  histone family protein DNA-binding protein  43.33 
 
 
90 aa  75.1  0.0000000000003  Chlorobium phaeobacteroides BS1  Bacteria  normal  0.064189  normal  0.0110025 
 
 
-
 
NC_007644  Moth_0085  nucleoid protein Hbs  40.66 
 
 
91 aa  74.7  0.0000000000004  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.0539634  normal 
 
 
-
 
NC_008554  Sfum_1430  histone family protein DNA-binding protein  39.33 
 
 
90 aa  74.7  0.0000000000004  Syntrophobacter fumaroxidans MPOB  Bacteria  hitchhiker  0.000153062  normal  0.144736 
 
 
-
 
NC_008639  Cpha266_0238  histone family protein DNA-binding protein  48.24 
 
 
91 aa  74.7  0.0000000000004  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_008528  OEOE_1010  nucleoid protein Hbs  43.18 
 
 
91 aa  74.3  0.0000000000005  Oenococcus oeni PSU-1  Bacteria  normal  0.301873  n/a   
 
 
-
 
NC_013161  Cyan8802_0983  histone family protein DNA-binding protein  42.7 
 
 
98 aa  73.9  0.0000000000007  Cyanothece sp. PCC 8802  Bacteria  normal  normal  0.0475372 
 
 
-
 
NC_011726  PCC8801_0956  histone family protein DNA-binding protein  42.7 
 
 
98 aa  73.9  0.0000000000007  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_008751  Dvul_1364  histone family protein DNA-binding protein  40.45 
 
 
90 aa  73.6  0.0000000000008  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_011729  PCC7424_0721  histone family protein DNA-binding protein  44.44 
 
 
91 aa  73.9  0.0000000000008  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.824313 
 
 
-
 
NC_011883  Ddes_1090  histone family protein DNA-binding protein  42.17 
 
 
90 aa  73.6  0.0000000000009  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_009513  Lreu_0765  nucleoid protein Hbs  42.86 
 
 
91 aa  73.2  0.000000000001  Lactobacillus reuteri DSM 20016  Bacteria  hitchhiker  0.00000296782  n/a   
 
 
-
 
NC_007514  Cag_0362  histone-like DNA-binding protein  42.7 
 
 
91 aa  72.8  0.000000000001  Chlorobium chlorochromatii CaD3  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_1608  histone-like DNA-binding protein  45.16 
 
 
96 aa  73.2  0.000000000001  Geobacter metallireducens GS-15  Bacteria  unclonable  5.49082e-20  normal 
 
 
-
 
NC_007969  Pcryo_1653  histone-like DNA-binding protein  37.78 
 
 
90 aa  73.2  0.000000000001  Psychrobacter cryohalolentis K5  Bacteria  unclonable  0.00000047794  unclonable  0.0000440637 
 
 
 
NC_008820  P9303_05711  histone-like DNA-binding protein  41.57 
 
 
91 aa  72.8  0.000000000001  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal  0.761988 
 
 
-
 
NC_002939  GSU3132  DNA-binding protein HU  43.33 
 
 
94 aa  72.4  0.000000000002  Geobacter sulfurreducens PCA  Bacteria  normal  0.246817  n/a   
 
 
-
 
NC_007517  Gmet_0355  histone-like DNA-binding protein  43.33 
 
 
94 aa  72.4  0.000000000002  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.00204011  normal  0.390975 
 
 
-
 
NC_013162  Coch_1967  histone family protein DNA-binding protein  42.86 
 
 
92 aa  72.4  0.000000000002  Capnocytophaga ochracea DSM 7271  Bacteria  hitchhiker  0.00606172  n/a   
 
 
-
 
NC_013171  Apre_0964  histone family protein DNA-binding protein  44.57 
 
 
92 aa  72.8  0.000000000002  Anaerococcus prevotii DSM 20548  Bacteria  decreased coverage  0.00000000994236  n/a   
 
 
-
 
NC_009091  P9301_15071  histone-like DNA-binding protein  41.57 
 
 
91 aa  71.6  0.000000000003  Prochlorococcus marinus str. MIT 9301  Bacteria  normal  n/a   
 
 
-
 
NC_007204  Psyc_1474  putative DNA-binding protein HU-beta  36.67 
 
 
90 aa  71.6  0.000000000003  Psychrobacter arcticus 273-4  Bacteria  hitchhiker  0.0000000000000997119  hitchhiker  0.0000985943 
 
 
-
 
NC_007513  Syncc9902_0579  histone-like DNA-binding protein  41.57 
 
 
91 aa  72  0.000000000003  Synechococcus sp. CC9902  Bacteria  normal  0.410031  n/a   
 
 
-
 
NC_007516  Syncc9605_2092  nucleoid protein Hbs  41.57 
 
 
91 aa  72  0.000000000003  Synechococcus sp. CC9605  Bacteria  normal  normal 
 
 
-
 
NC_011769  DvMF_0500  histone family protein DNA-binding protein  38.2 
 
 
90 aa  71.6  0.000000000003  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    hitchhiker  0.000759527 
 
 
-
 
NC_008816  A9601_15201  histone-like DNA-binding protein  41.57 
 
 
91 aa  71.6  0.000000000003  Prochlorococcus marinus str. AS9601  Bacteria  normal  0.581406  n/a   
 
 
-
 
NC_012793  GWCH70_2154  histone family protein DNA-binding protein  39.33 
 
 
90 aa  71.2  0.000000000004  Geobacillus sp. WCH70  Bacteria  hitchhiker  0.000000552537  n/a   
 
 
-
 
NC_009524  PsycPRwf_1626  histone family protein DNA-binding protein  36.67 
 
 
90 aa  71.2  0.000000000004  Psychrobacter sp. PRwf-1  Bacteria  unclonable  0.00000000000133039  hitchhiker  0.00000000638901 
 
 
-
 
NC_008817  P9515_14821  histone-like DNA-binding protein  41.57 
 
 
91 aa  71.2  0.000000000004  Prochlorococcus marinus str. MIT 9515  Bacteria  normal  n/a   
 
 
-
 
NC_009976  P9211_13741  histone-like DNA-binding protein  40.45 
 
 
92 aa  71.2  0.000000000004  Prochlorococcus marinus str. MIT 9211  Bacteria  normal  normal 
 
 
-
 
NC_007498  Pcar_1880  nucleoid DNA-binding protein  41.94 
 
 
94 aa  71.6  0.000000000004  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.000000082072  n/a   
 
 
-
 
NC_007577  PMT9312_1419  histone-like DNA-binding protein  41.57 
 
 
91 aa  71.2  0.000000000004  Prochlorococcus marinus str. MIT 9312  Bacteria  normal  n/a   
 
 
-
 
NC_010424  Daud_0075  histone family protein DNA-binding protein  41.76 
 
 
91 aa  70.9  0.000000000005  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_0135  histone family protein DNA-binding protein  41.76 
 
 
91 aa  70.9  0.000000000005  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.00267128  n/a   
 
 
-
 
NC_008312  Tery_1610  nucleoid protein Hbs  42.22 
 
 
95 aa  70.9  0.000000000005  Trichodesmium erythraeum IMS101  Bacteria  normal  0.148246  normal  0.783199 
 
 
-
 
NC_011883  Ddes_0087  histone family protein DNA-binding protein  43.33 
 
 
91 aa  70.9  0.000000000006  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_2489  histone family protein DNA-binding protein  42.22 
 
 
95 aa  70.9  0.000000000006  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_010625  Bphy_6261  histone family protein DNA-binding protein  40.22 
 
 
124 aa  70.5  0.000000000007  Burkholderia phymatum STM815  Bacteria  normal  normal  0.307105 
 
 
-
 
NC_008751  Dvul_2207  histone family protein DNA-binding protein  42.22 
 
 
91 aa  70.5  0.000000000008  Desulfovibrio vulgaris DP4  Bacteria  normal  0.976216  normal  0.483194 
 
 
-
 
NC_011311  VSAL_p840_28  DNA-binding protein HU-alpha  37.78 
 
 
91 aa  70.5  0.000000000008  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_008819  NATL1_17471  histone-like DNA-binding protein  40.45 
 
 
91 aa  70.5  0.000000000008  Prochlorococcus marinus str. NATL1A  Bacteria  normal  0.631409  normal 
 
 
-
 
NC_007335  PMN2A_0892  histone-like DNA-binding protein  40.45 
 
 
91 aa  70.5  0.000000000008  Prochlorococcus marinus str. NATL2A  Bacteria  normal  0.879625  n/a   
 
 
-
 
NC_008531  LEUM_1290  nucleoid protein Hbs  42.05 
 
 
91 aa  70.5  0.000000000008  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  hitchhiker  0.00000854913  n/a   
 
 
-
 
NC_009802  CCC13826_0021  DNA-binding protein HU 1 (DNA-binding protein II; HB)  40.23 
 
 
100 aa  70.5  0.000000000008  Campylobacter concisus 13826  Bacteria  unclonable  0.00000160012  n/a   
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>