Gene Synpcc7942_1108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1108 
Symbol 
ID3775058 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1125373 
End bp1125648 
Gene Length276 bp 
Protein Length91 aa 
Translation table11 
GC content52% 
IMG OID637799534 
Productnucleoid protein Hbs 
Protein accessionYP_400125 
Protein GI81299917 
COG category[L] Replication, recombination and repair 
COG ID[COG0776] Bacterial nucleoid DNA-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.0932961 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.770831 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAAGG GTGACTTGAT CGACAAGGTT GCGGATCGTG CCCACGTTAC GAAAAAACAG 
GCAGAACACA TCATTTCAGC GGCACTCGAC ACGATCATCG AGGCAGTCTC TGGCGGTGAC
AAAGTCACCT TGGTTGGCTT TGGTTCCTTT GAACCTCGCG ATCGCAAAGC GCGGGAAGGC
CGCAATCCCA AAACTGGACA GAAGATGAAA ATCCCTGCAA CGAAGGTTCC AGCCTTCTCT
GCCGGTAAGC TCTTTAAGGA GAAAGTCAGC ACCTAG
 
Protein sequence
MNKGDLIDKV ADRAHVTKKQ AEHIISAALD TIIEAVSGGD KVTLVGFGSF EPRDRKAREG 
RNPKTGQKMK IPATKVPAFS AGKLFKEKVS T