Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_p840_28 |
Symbol | hupA |
ID | 6961442 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011311 |
Strand | + |
Start bp | 31361 |
End bp | 31636 |
Gene Length | 276 bp |
Protein Length | 91 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | |
Product | DNA-binding protein HU-alpha |
Protein accession | YP_002261518 |
Protein GI | 215778378 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 50 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACAAAA AAGACTTAGT ATCACACATT GCAGATATCG CGGATTTATC ACAACAAGAA GCAACAGCGG CGTTAAATGC CACCGTAGAA AGCATTACCA ATGCACTAAA AAACGGTGAA GAAGTCACGT TAATTGGATT TGGCACATTT AAAGTCAACC CACGAGCGGC GCGTGAAGGT CGTAATCCTA AAACAGGCGA TACCATTCAA ATTGCCGCAA GCAATATGCC GGCATTTAAA GCCGGTAAAG CATTAAAAGA AGCAGTGAAT GAATAG
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Protein sequence | MNKKDLVSHI ADIADLSQQE ATAALNATVE SITNALKNGE EVTLIGFGTF KVNPRAAREG RNPKTGDTIQ IAASNMPAFK AGKALKEAVN E
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