27 homologs were found in PanDaTox collection
for query gene Sbal195_3380 on replicon NC_009997
Organism: Shewanella baltica OS195



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009997  Sbal195_3380  XRE family transcriptional regulator  100 
 
 		 115 aa  234  3e-61  Shewanella baltica OS195  Bacteria  normal  0.738813  hitchhiker  0.00256975 
 
 
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NC_009665  Shew185_3350  XRE family transcriptional regulator  95.65 
 
 		 115 aa  224  4e-58  Shewanella baltica OS185  Bacteria  normal  1  n/a   
 
 
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NC_009665  Shew185_3247  XRE family transcriptional regulator  95.65 
 
 		 115 aa  224  4e-58  Shewanella baltica OS185  Bacteria  normal  1  n/a   
 
 
-
 
NC_009665  Shew185_1872  XRE family transcriptional regulator  94.78 
 
 		 115 aa  222  1e-57  Shewanella baltica OS185  Bacteria  normal  0.765913  n/a   
 
 
-
 
NC_009997  Sbal195_3478  XRE family transcriptional regulator  93.04 
 
 		 115 aa  218  1.9999999999999999e-56  Shewanella baltica OS195  Bacteria  normal  1  hitchhiker  0.0022624 
 
 
-
 
NC_010506  Swoo_4574  XRE family transcriptional regulator  64.91 
 
 		 103 aa  80.5  0.000000000000007  Shewanella woodyi ATCC 51908  Bacteria  normal  1  unclonable  0.0000000193925 
 
 
-
 
NC_007643  Rru_A1125  XRE family transcriptional regulator  35.9 
 
 		 104 aa  57.4  0.00000007  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  1  n/a   
 
 
-
 
NC_012858  Rleg_6814  transcriptional regulator, XRE family  38.81 
 
 		 102 aa  48.9  0.00002  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.745896  normal  1 
 
 
-
 
NC_011138  MADE_04053  Transcriptional Regulator, XRE family protein  31.03 
 
 		 106 aa  48.5  0.00003  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  1  n/a   
 
 
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NC_008009  Acid345_4570  XRE family transcriptional regulator  35.21 
 
 		 99 aa  48.1  0.00004  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  0.27714 
 
 
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NC_013421  Pecwa_0549  transcriptional regulator, XRE family  30.86 
 
 		 103 aa  47.8  0.00005  Pectobacterium wasabiae WPP163  Bacteria  normal  1  n/a   
 
 
-
 
NC_007974  Rmet_4373  XRE family transcriptional regulator  44.07 
 
 		 123 aa  47.8  0.00005  Cupriavidus metallidurans CH34  Bacteria  hitchhiker  0.00851296  normal  0.949544 
 
 
-
 
NC_007348  Reut_B3922  helix-hairpin-helix DNA-binding motif-containing protein  44.07 
 
 		 118 aa  47.8  0.00006  Ralstonia eutropha JMP134  Bacteria  normal  1  n/a   
 
 
-
 
NC_010678  Rpic_4487  transcriptional regulator, XRE family  34.29 
 
 		 177 aa  47.4  0.00007  Ralstonia pickettii 12J  Bacteria  normal  0.181354  normal  0.422127 
 
 
-
 
NC_012857  Rpic12D_4620  transcriptional regulator, XRE family  34.29 
 
 		 177 aa  47.4  0.00007  Ralstonia pickettii 12D  Bacteria  normal  0.157225  normal  0.499919 
 
 
-
 
NC_003296  RS01906  hypothetical protein  32.97 
 
 		 180 aa  47.4  0.00007  Ralstonia solanacearum GMI1000  Bacteria  normal  0.610922  normal  0.293874 
 
 
-
 
NC_010831  Cphamn1_0339  transcriptional regulator, XRE family  32.5 
 
 		 115 aa  45.4  0.0002  Chlorobium phaeobacteroides BS1  Bacteria  normal  1  normal  0.852602 
 
 
-
 
NC_009483  Gura_1476  XRE family transcriptional regulator  35.38 
 
 		 91 aa  43.1  0.001  Geobacter uraniireducens Rf4  Bacteria  normal  1  n/a   
 
 
-
 
NC_008639  Cpha266_2265  helix-turn-helix domain-containing protein  30 
 
 		 115 aa  42.4  0.002  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  1  n/a   
 
 
-
 
NC_006368  lpp0065  hypothetical protein  37.1 
 
 		 79 aa  42.7  0.002  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_010515  Bcenmc03_5133  XRE family transcriptional regulator  31.33 
 
 		 111 aa  41.6  0.003  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.93216  normal  0.775541 
 
 
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NC_010803  Clim_0110  transcriptional regulator, XRE family  30 
 
 		 115 aa  41.6  0.003  Chlorobium limicola DSM 245  Bacteria  normal  1  n/a   
 
 
-
 
NC_010814  Glov_2898  transcriptional regulator, XRE family  38.71 
 
 		 83 aa  42  0.003  Geobacter lovleyi SZ  Bacteria  normal  1  n/a   
 
 
-
 
NC_009436  Ent638_2034  XRE family transcriptional regulator  35.38 
 
 		 83 aa  40.8  0.006  Enterobacter sp. 638  Bacteria  normal  1  normal  0.194194 
 
 
-
 
NC_009712  Mboo_1574  XRE family transcriptional regulator  44 
 
 		 184 aa  40.8  0.006  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.844747  normal  1 
 
 
-
 
NC_008391  Bamb_4541  XRE family transcriptional regulator  26.47 
 
 		 108 aa  40  0.01  Burkholderia ambifaria AMMD  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007355  Mbar_A2079  XRE family transcriptional regulator  30.19 
 
 		 186 aa  40  0.01  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.0185194  normal  1 
 
 
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