Gene Swoo_4574 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_4574 
Symbol 
ID6118940 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp5543609 
End bp5543920 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content40% 
IMG OID641636145 
ProductXRE family transcriptional regulator 
Protein accessionYP_001762919 
Protein GI170728893 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000193925 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGACGATTG AGCAAATTTC CAAACTACTT TCATCTCGAC GTAAACAGCT TCAGATGGAA 
CAAAAAGATA TGTATATGCG CATTGGTATG AAGCAGCAGC AATACCAGCG TATCGAAGCA
GGTAGCGATA TGAAGTTGTC TACTCTGTTA CGTGTTCTAG ATGGTTTGAA TATGGAATTA
ACCATTGCCC CTAAAGAAAG CAATATTCAA CAACCGAAAT TAGAGGCCGC TTCTAGCGAT
GCCAGTGTTG AATCGCTAGA AGATGATTCA GATGATTTAG GGTTTTGGTT TGGATCTGAG
GATCAAAAAT GA
 
Protein sequence
MTIEQISKLL SSRRKQLQME QKDMYMRIGM KQQQYQRIEA GSDMKLSTLL RVLDGLNMEL 
TIAPKESNIQ QPKLEAASSD ASVESLEDDS DDLGFWFGSE DQK