Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RS01906 |
Symbol | RSp0801 |
ID | 1223108 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | + |
Start bp | 1009014 |
End bp | 1009556 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 637240661 |
Product | hypothetical protein |
Protein accession | NP_522362 |
Protein GI | 17549022 |
COG category | [K] Transcription |
COG ID | [COG1396] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.610922 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.293874 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACAGC CCTTCAAGCA GTTACACAGT CTGCGCAAGT CGCGCAAGCT CAAACAGGAA GACGTCGCCA AGATGGCCGG CATCTCGCGC GAGGCGTATC TGCGTGCGGA ATCCGGCCGT GCCGATCCGC GCCTGTCGAC GCTGATGGCC GTGGCCGGGG CGCTGGGGCT GGAAGTCGTG CTTGCCCCGC GCGAAGCCGT GGCCGAAATC GAGCGCGTGA TCGCCAGCCA TCCGACCCAG CCGTCGCCGG GCGGATCGCC TGGGACCGAG GCGGGCCGCG AAGGCCCGTC CGGTGCCATG GGCGGGTCCA GCGGCCATGG CCTGGCGGGC CAGTATCGCG GTCCGGAACG CCAGCCGCAG TCGGCCTACC ATCCGGGCGC CGCGCCCAGC CAGGCAGGGC AGCAGGGCGC GCCGCACGCC GGCAATGTCG GCAGCGGTTC CGACGATCGC TCGCGCGCGG GTTCGGGCGA TCGGCCGGCG GCCGGCGGCA CCGGCTCAAC GGGTGGCTCC GACCGCCCGG GCTCGGGTTC GCGCGAATCC TGA
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Protein sequence | MEQPFKQLHS LRKSRKLKQE DVAKMAGISR EAYLRAESGR ADPRLSTLMA VAGALGLEVV LAPREAVAEI ERVIASHPTQ PSPGGSPGTE AGREGPSGAM GGSSGHGLAG QYRGPERQPQ SAYHPGAAPS QAGQQGAPHA GNVGSGSDDR SRAGSGDRPA AGGTGSTGGS DRPGSGSRES
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