Gene MADE_04053 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_04053 
Symbol 
ID6776596 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp4362776 
End bp4363096 
Gene Length321 bp 
Protein Length106 aa 
Translation table11 
GC content47% 
IMG OID642757504 
ProductTranscriptional Regulator, XRE family protein 
Protein accessionYP_002128337 
Protein GI196158848 
COG category[K] Transcription 
COG ID[COG3620] Predicted transcriptional regulator with C-terminal CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCTATG TAACAGAGCA GATACTAGAA AGTCTTCGAG AAGCTCGGGT ACGCAAGGGG 
TTTAGCCAAA GAGAGTTAAG CGCGCGTTCG GGGGTGCCGC AAAGTCATAT TTCGAAAATC
GAGTCTGGCG GCGTTGATTT AAGAATATCC AGTTTGATTG CACTTGCCCG TGTACTCGAC
CTAGAGTTAT TGGTTGCGCC TAAAAAGTCC GTTCCTGCCA TCAAGTCAAT CATTCGAAGC
AGCCAAGGTA TTAACGGTAT CAGCGATGAA GCTGAGCCAA TACCGCCCGC ATATCAGCTA
GAGGAAGACA TTGATGACTA A
 
Protein sequence
MSYVTEQILE SLREARVRKG FSQRELSARS GVPQSHISKI ESGGVDLRIS SLIALARVLD 
LELLVAPKKS VPAIKSIIRS SQGINGISDE AEPIPPAYQL EEDIDD