Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_04053 |
Symbol | |
ID | 6776596 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 4362776 |
End bp | 4363096 |
Gene Length | 321 bp |
Protein Length | 106 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642757504 |
Product | Transcriptional Regulator, XRE family protein |
Protein accession | YP_002128337 |
Protein GI | 196158848 |
COG category | [K] Transcription |
COG ID | [COG3620] Predicted transcriptional regulator with C-terminal CBS domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCTATG TAACAGAGCA GATACTAGAA AGTCTTCGAG AAGCTCGGGT ACGCAAGGGG TTTAGCCAAA GAGAGTTAAG CGCGCGTTCG GGGGTGCCGC AAAGTCATAT TTCGAAAATC GAGTCTGGCG GCGTTGATTT AAGAATATCC AGTTTGATTG CACTTGCCCG TGTACTCGAC CTAGAGTTAT TGGTTGCGCC TAAAAAGTCC GTTCCTGCCA TCAAGTCAAT CATTCGAAGC AGCCAAGGTA TTAACGGTAT CAGCGATGAA GCTGAGCCAA TACCGCCCGC ATATCAGCTA GAGGAAGACA TTGATGACTA A
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Protein sequence | MSYVTEQILE SLREARVRKG FSQRELSARS GVPQSHISKI ESGGVDLRIS SLIALARVLD LELLVAPKKS VPAIKSIIRS SQGINGISDE AEPIPPAYQL EEDIDD
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