Gene Mboo_1574 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1574 
Symbol 
ID5410586 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1642957 
End bp1643511 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content59% 
IMG OID640868808 
ProductXRE family transcriptional regulator 
Protein accessionYP_001404734 
Protein GI154151116 
COG category[K] Transcription 
COG ID[COG3620] Predicted transcriptional regulator with C-terminal CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.844747 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATATCC CCAGTCCTGA AGAACTCCGT TCCCGCCGTG AAACACTGGG TCTCCGGCAG 
ACCGAAATTG CCCGCAGGGC AGGGATCAGC CAGTCAATGG TGGCCCGGAT CGAGGCCGGA
AGCGTAGACC CCCGGGTCAG CACCTTGAAT AAGATCATTG CGGTTCTCAA TAATGCCGAA
CCCCGGAAAG TTACGGCCGG CCAGATCATG CACACGCCGG TACTTTCTGT CCCGCCGCAG
GCAAGCATTT CGCAGGCGCT TGAGCTTTTC GAGAAGAACA ATGTCTCCCA GCTGCCGGTG
ATCGAGCGGG GTGCACCGGT AGGCTGTGTC TCCGAATCGG CGATCGTAAA GGCGCTTGGC
CAGCAGCGCC TCCACCCTGC CCACCCGGTA ATTGTCCGGG ACTTTATCGA GCCGGGTTTT
CCCACGGTAC CCCCGGACAT GGACGTGGAG ACGGTCATAA ACATTCTCCA GCAGAACCAT
GCGGTGCTGG TGACCGAAGG ACGCCTTGTA AAAGGCGTGA TCACAAAACA CGACCTGATC
ACGCTTATCG TCTGA
 
Protein sequence
MHIPSPEELR SRRETLGLRQ TEIARRAGIS QSMVARIEAG SVDPRVSTLN KIIAVLNNAE 
PRKVTAGQIM HTPVLSVPPQ ASISQALELF EKNNVSQLPV IERGAPVGCV SESAIVKALG
QQRLHPAHPV IVRDFIEPGF PTVPPDMDVE TVINILQQNH AVLVTEGRLV KGVITKHDLI
TLIV