Gene Sbal195_3478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_3478 
Symbol 
ID5755291 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp4100606 
End bp4100953 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content41% 
IMG OID641289820 
ProductXRE family transcriptional regulator 
Protein accessionYP_001555900 
Protein GI160876584 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0022624 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAGCATC TCAGCGAATT AGCCACAGAA CTCAAGCACT ACCGAGAACA ACTAGCACTA 
AGTCAGAAAG ACATGCTGCT AAACATAGGT ATGTCACAGC AACAATACCA ACGAATAGAA
AGTGGCAGTG ATACTCGCTT ATCGACATTA CTGAGAGTCT TGGAAGGATT AAATCTTGAA
ATGATGATCG TTCCTAAACA GCACATCAGT GCAGTAAAAG CCCTCATTAA CCAAACAACT
TCAGAACCAG AAATTGACCG TCATTCGCCT AACCACTTAA CGGCAGAGAC GGGCACATCT
TGGGAAAAGG TCTTACATTC AGTTGATGAT AAAGAAGAAA ATCTATGA
 
Protein sequence
MKHLSELATE LKHYREQLAL SQKDMLLNIG MSQQQYQRIE SGSDTRLSTL LRVLEGLNLE 
MMIVPKQHIS AVKALINQTT SEPEIDRHSP NHLTAETGTS WEKVLHSVDD KEENL