Gene Shew185_3350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_3350 
Symbol 
ID5369852 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp3994310 
End bp3994657 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content40% 
IMG OID640831609 
ProductXRE family transcriptional regulator 
Protein accessionYP_001367540 
Protein GI153001859 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCATC TCAGCGAATT AGCCACAGAA CTCAAGCACT ACCGAGAACA ACTAGCACTA 
AGTCAGAAAG ACATGCTGCT GAACATTGGT ATGTCACAGC AACAATACCA ACGAATAGAA
AGTGGCAGTG ATACTCGCTT ATCGACATTA CTGAGAGTCT TAGAAGGATT AAATCTTGAA
ATGATGATCG TCCCTAAACA GCACATAAGT GCAGTAAAAG CACTCATTAA CCAAGCAACT
TCAGATCCAG AAATTGACCG TCATTTGCCT AACAACTTAA CGACAGAGAC GGGGACATCT
TGGGATAAGG TCTTACATTC AGTTGATGAT AAAGAAGATA ATCTATGA
 
Protein sequence
MKHLSELATE LKHYREQLAL SQKDMLLNIG MSQQQYQRIE SGSDTRLSTL LRVLEGLNLE 
MMIVPKQHIS AVKALINQAT SDPEIDRHLP NNLTTETGTS WDKVLHSVDD KEDNL