27 homologs were found in PanDaTox collection
for query gene Pecwa_0423 on replicon NC_013421
Organism: Pectobacterium wasabiae WPP163



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013421  Pecwa_0423  transcriptional regulator, LuxR family  100 
 
 		 221 aa  462  1e-129  Pectobacterium wasabiae WPP163  Bacteria  normal  1  n/a   
 
 
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NC_012917  PC1_0372  putative PAS/PAC sensor protein  94.12 
 
 		 221 aa  441  1e-123  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  1  n/a   
 
 
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NC_012917  PC1_0371  transcriptional regulator, LuxR family  28.37 
 
 		 227 aa  91.3  1e-17  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.936  n/a   
 
 
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NC_013421  Pecwa_0422  transcriptional regulator, LuxR family  29.07 
 
 		 227 aa  90.1  3e-17  Pectobacterium wasabiae WPP163  Bacteria  normal  1  n/a   
 
 
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NC_012912  Dd1591_0414  transcriptional regulator, LuxR family  27.59 
 
 		 222 aa  70.9  0.00000000002  Dickeya zeae Ech1591  Bacteria  normal  1  n/a   
 
 
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NC_009832  Spro_4193  LuxR family transcriptional regulator  26.87 
 
 		 229 aa  65.9  0.0000000004  Serratia proteamaculans 568  Bacteria  normal  1  normal  1 
 
 
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NC_012912  Dd1591_3280  transcriptional regulator, LuxR family  26.7 
 
 		 229 aa  64.7  0.000000001  Dickeya zeae Ech1591  Bacteria  normal  0.158452  n/a   
 
 
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NC_012880  Dd703_3202  transcriptional regulator, LuxR family  24.26 
 
 		 229 aa  62  0.000000006  Dickeya dadantii Ech703  Bacteria  normal  1  n/a   
 
 
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NC_008463  PA14_46850  putative transcriptional regulator  25.35 
 
 		 230 aa  60.1  0.00000003  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  hitchhiker  0.000000531033 
 
 
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NC_009656  PSPA7_4037  putative transcriptional regulator  22.52 
 
 		 230 aa  56.2  0.0000003  Pseudomonas aeruginosa PA7  Bacteria  normal  0.586307  n/a   
 
 
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NC_013421  Pecwa_1045  transcriptional regulator, LuxR family  23.76 
 
 		 229 aa  53.1  0.000003  Pectobacterium wasabiae WPP163  Bacteria  normal  1  n/a   
 
 
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NC_012917  PC1_0816  transcriptional regulator, LuxR family  22.77 
 
 		 229 aa  53.1  0.000003  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  1  n/a   
 
 
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NC_010625  Bphy_6558  two component LuxR family transcriptional regulator  32.81 
 
 		 210 aa  47.8  0.0001  Burkholderia phymatum STM815  Bacteria  normal  1  normal  0.458284 
 
 
-
 
NC_009456  VC0395_0164  LuxR family transcriptional regulator  23.56 
 
 		 246 aa  48.1  0.0001  Vibrio cholerae O395  Bacteria  normal  0.0153554  n/a   
 
 
-
 
NC_011071  Smal_0258  two component transcriptional regulator, LuxR family  38.1 
 
 		 200 aa  45.8  0.0005  Stenotrophomonas maltophilia R551-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011662  Tmz1t_0180  two component transcriptional regulator, LuxR family  31.75 
 
 		 213 aa  45.4  0.0007  Thauera sp. MZ1T  Bacteria  normal  1  n/a   
 
 
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NC_011894  Mnod_0855  two component transcriptional regulator, LuxR family  25.64 
 
 		 223 aa  44.3  0.001  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.082304  n/a   
 
 
-
 
NC_009675  Anae109_3555  response regulator receiver protein  33.33 
 
 		 176 aa  44.7  0.001  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  0.0548987 
 
 
-
 
NC_013457  VEA_001015  transcriptional regulator LuxR family  24.7 
 
 		 184 aa  43.5  0.002  Vibrio sp. Ex25  Bacteria  normal  1  n/a   
 
 
-
 
NC_011891  A2cp1_3596  transcriptional regulator, LuxR family  35.48 
 
 		 178 aa  43.5  0.002  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.445896  n/a   
 
 
-
 
NC_011145  AnaeK_3528  transcriptional regulator, LuxR family  35.48 
 
 		 178 aa  43.5  0.002  Anaeromyxobacter sp. K  Bacteria  normal  0.993919  n/a   
 
 
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NC_011071  Smal_1575  transcriptional regulator, LuxR family  28.57 
 
 		 234 aa  43.9  0.002  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.629023  normal  1 
 
 
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NC_009720  Xaut_0924  response regulator receiver protein  37.29 
 
 		 359 aa  43.9  0.002  Xanthobacter autotrophicus Py2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007760  Adeh_3447  LuxR family transcriptional regulator  33.78 
 
 		 175 aa  43.9  0.002  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  1  n/a   
 
 
-
 
NC_003910  CPS_0452  sensory box protein  24.27 
 
 		 451 aa  43.1  0.003  Colwellia psychrerythraea 34H  Bacteria  normal  1  n/a   
 
 
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NC_013223  Dret_0229  PAS/PAC sensor signal transduction histidine kinase  30.1 
 
 		 701 aa  42.7  0.004  Desulfohalobium retbaense DSM 5692  Bacteria  normal  1  normal  0.282736 
 
 
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NC_009621  Smed_5113  diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s)  28.33 
 
 		 1071 aa  41.6  0.009  Sinorhizobium medicae WSM419  Bacteria  normal  1  decreased coverage  0.00592248 
 
 
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